RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 IRAK1P51617 712 aa5.17□□□□□ -1.58
CDKL5-208ENST00000624953 GP2P55259 537 aaKnown RBP5.17□□□□□ -1.58
CDKL5-208ENST00000624953 FAM160A1Q05DH4 1040 aa5.17□□□□□ -1.58
CDKL5-208ENST00000624953 ZNF394Q53GI3 561 aa5.17□□□□□ -1.58
CDKL5-208ENST00000624953 SNAP47Q5SQN1 464 aa5.17□□□□□ -1.58
CDKL5-208ENST00000624953 PRAMEF13Q5VWM6 474 aa5.17□□□□□ -1.58
CDKL5-208ENST00000624953 JARID2Q92833 1246 aaPredicted RBP5.17□□□□□ -1.58
CDKL5-208ENST00000624953 VWCEQ96DN2 955 aa5.17□□□□□ -1.58
CDKL5-208ENST00000624953 TMEM87BQ96K49 555 aa5.17□□□□□ -1.58
CDKL5-208ENST00000624953 MAPK8IP1Q9UQF2 711 aa5.17□□□□□ -1.58
CDKL5-208ENST00000624953 NUP153P49790 1475 aaKnown RBP5.17□□□□□ -1.58
CDKL5-208ENST00000624953 GOLGA3Q08378 1498 aa5.16□□□□□ -1.58
CDKL5-208ENST00000624953 MINDY4BA8MYZ0 360 aa5.16□□□□□ -1.58
CDKL5-208ENST00000624953 CYP26A1O43174 497 aa5.16□□□□□ -1.58
CDKL5-208ENST00000624953 PAX4O43316 350 aa5.16□□□□□ -1.58
CDKL5-208ENST00000624953 PGRP06401 933 aa5.16□□□□□ -1.58
CDKL5-208ENST00000624953 GRIK1P39086 918 aa5.16□□□□□ -1.58
CDKL5-208ENST00000624953 PDE4BQ07343 736 aa5.16□□□□□ -1.58
CDKL5-208ENST00000624953 NKPD1Q17RQ9 610 aa5.16□□□□□ -1.58
CDKL5-208ENST00000624953 DUSP27Q5VZP5 1158 aa5.16□□□□□ -1.58
CDKL5-208ENST00000624953 SPACA3Q8IXA5 215 aa5.16□□□□□ -1.58
CDKL5-208ENST00000624953 FMNL2Q96PY5 1086 aa5.16□□□□□ -1.58
CDKL5-208ENST00000624953 BCL11AQ9H165 835 aa5.16□□□□□ -1.58
CDKL5-208ENST00000624953 LGR6Q9HBX8 967 aa5.16□□□□□ -1.58
CDKL5-208ENST00000624953 CCDC39Q9UFE4 941 aa5.16□□□□□ -1.58
CDKL5-208ENST00000624953 CDC42BPBQ9Y5S2 1711 aa5.16□□□□□ -1.58
CDKL5-208ENST00000624953 ZFYVE16Q7Z3T8 1539 aa5.16□□□□□ -1.58
CDKL5-208ENST00000624953 DISP3Q9P2K9 1392 aa5.16□□□□□ -1.58
CDKL5-208ENST00000624953 PRXQ9BXM0 1461 aa5.15□□□□□ -1.58
CDKL5-208ENST00000624953 EFCAB5A4FU69 1503 aa5.15□□□□□ -1.58
CDKL5-208ENST00000624953 CEACAM5P06731 702 aa5.15□□□□□ -1.59
CDKL5-208ENST00000624953 ETF1P62495 437 aaKnown RBP5.15□□□□□ -1.59
CDKL5-208ENST00000624953 CDCP2Q5VXM1 449 aa5.15□□□□□ -1.59
CDKL5-208ENST00000624953 USP48Q86UV5 1035 aa5.15□□□□□ -1.59
CDKL5-208ENST00000624953 RIN3Q8TB24 985 aa5.15□□□□□ -1.59
CDKL5-208ENST00000624953 CYB5D2Q8WUJ1 264 aa5.15□□□□□ -1.59
CDKL5-208ENST00000624953 COX4I2Q96KJ9 171 aa5.15□□□□□ -1.59
CDKL5-208ENST00000624953 BRMS1Q9HCU9 246 aa5.15□□□□□ -1.59
CDKL5-208ENST00000624953 BSDC1Q9NW68 430 aaPredicted RBP5.15□□□□□ -1.59
CDKL5-208ENST00000624953 UBP1Q9NZI7 540 aa5.15□□□□□ -1.59
CDKL5-208ENST00000624953 REV1Q9UBZ9 1251 aa5.15□□□□□ -1.59
CDKL5-208ENST00000624953 ABCA6Q8N139 1617 aa5.15□□□□□ -1.59
CDKL5-208ENST00000624953 FHOD3Q2V2M9 1422 aa5.14□□□□□ -1.59
CDKL5-208ENST00000624953 FANCAO15360 1455 aa5.14□□□□□ -1.59
CDKL5-208ENST00000624953 LMNB1P20700 586 aa5.14□□□□□ -1.59
CDKL5-208ENST00000624953 CWF19L2Q2TBE0 894 aaKnown RBP5.14□□□□□ -1.59
CDKL5-208ENST00000624953 LETMD1Q6P1Q0 360 aa5.14□□□□□ -1.59
CDKL5-208ENST00000624953 CBLL1Q75N03 491 aa5.14□□□□□ -1.59
CDKL5-208ENST00000624953 CDC37L1Q7L3B6 337 aa5.14□□□□□ -1.59
CDKL5-208ENST00000624953 VSIG10LQ86VR7 867 aa5.14□□□□□ -1.59
CDKL5-208ENST00000624953 KIAA0825Q8IV33 1275 aa5.14□□□□□ -1.59
CDKL5-208ENST00000624953 RBBP8NLQ8NC74 664 aaPredicted RBP5.14□□□□□ -1.59
CDKL5-208ENST00000624953 NETO1Q8TDF5 533 aa5.14□□□□□ -1.59
CDKL5-208ENST00000624953 BCL7CQ8WUZ0 217 aaPredicted RBP5.14□□□□□ -1.59
CDKL5-208ENST00000624953 ZNF428Q96B54 188 aa5.14□□□□□ -1.59
CDKL5-208ENST00000624953 MISP3Q96FF7 219 aa5.14□□□□□ -1.59
CDKL5-208ENST00000624953 SPON2Q9BUD6 331 aa5.14□□□□□ -1.59
CDKL5-208ENST00000624953 ZNRF3Q9ULT6 936 aa5.14□□□□□ -1.59
CDKL5-208ENST00000624953 PCDHGB7Q9Y5F8 929 aa5.14□□□□□ -1.59
CDKL5-208ENST00000624953 SNX11Q9Y5W9 270 aa5.14□□□□□ -1.59
CDKL5-208ENST00000624953 ST14Q9Y5Y6 855 aa5.14□□□□□ -1.59
CDKL5-208ENST00000624953 CAPN6Q9Y6Q1 641 aa5.14□□□□□ -1.59
CDKL5-208ENST00000624953 KIF14Q15058 1648 aa5.14□□□□□ -1.59
CDKL5-208ENST00000624953 DIP2CQ9Y2E4 1556 aa5.13□□□□□ -1.59
CDKL5-208ENST00000624953 ZNF142P52746 1687 aaPredicted RBP5.13□□□□□ -1.59
CDKL5-208ENST00000624953 SLC22A31A6NKX4 558 aa5.13□□□□□ -1.59
CDKL5-208ENST00000624953 UPK3BL1B0FP48 263 aa5.13□□□□□ -1.59
CDKL5-208ENST00000624953 UPK3BL2E5RIL1 263 aa5.13□□□□□ -1.59
CDKL5-208ENST00000624953 RBAK-RBAKDNI3L0D1 243 aa5.13□□□□□ -1.59
CDKL5-208ENST00000624953 TNFRSF10CO14798 259 aa5.13□□□□□ -1.59
CDKL5-208ENST00000624953 BPNT1O95861 308 aa5.13□□□□□ -1.59
CDKL5-208ENST00000624953 SRFP11831 508 aa5.13□□□□□ -1.59
CDKL5-208ENST00000624953 PLCG1P19174 1290 aa5.13□□□□□ -1.59
CDKL5-208ENST00000624953 SOX9P48436 509 aa5.13□□□□□ -1.59
CDKL5-208ENST00000624953 NT5DC4Q86YG4 428 aa5.13□□□□□ -1.59
CDKL5-208ENST00000624953 PLD6Q8N2A8 252 aaKnown RBP5.13□□□□□ -1.59
CDKL5-208ENST00000624953 TAB3Q8N5C8 712 aaPredicted RBP5.13□□□□□ -1.59
CDKL5-208ENST00000624953 FAM181AQ8N9Y4 354 aa5.13□□□□□ -1.59
CDKL5-208ENST00000624953 CNNM2Q9H8M5 875 aa5.13□□□□□ -1.59
CDKL5-208ENST00000624953 PAK6Q9NQU5 681 aaPredicted RBP5.13□□□□□ -1.59
CDKL5-208ENST00000624953 SEMA3GQ9NS98 782 aa5.13□□□□□ -1.59
CDKL5-208ENST00000624953 VAV3Q9UKW4 847 aa5.13□□□□□ -1.59
CDKL5-208ENST00000624953 RNF114Q9Y508 228 aa5.13□□□□□ -1.59
CDKL5-208ENST00000624953 KIDINS220Q9ULH0 1771 aa5.13□□□□□ -1.59
CDKL5-208ENST00000624953 PHLDB1Q86UU1 1377 aa5.13□□□□□ -1.59
CDKL5-208ENST00000624953 DENND4BO75064 1496 aaPredicted RBP5.13□□□□□ -1.59
CDKL5-208ENST00000624953 KDM5CP41229 1560 aa5.12□□□□□ -1.59
CDKL5-208ENST00000624953 ITSN2Q9NZM3 1697 aa5.12□□□□□ -1.59
CDKL5-208ENST00000624953 PRR33A8MZF0 331 aa5.12□□□□□ -1.59
CDKL5-208ENST00000624953 CHURC1-FNTBB4DL54 471 aa5.12□□□□□ -1.59
CDKL5-208ENST00000624953 TLR3O15455 904 aaKnown RBP5.12□□□□□ -1.59
CDKL5-208ENST00000624953 TXKP42681 527 aa5.12□□□□□ -1.59
CDKL5-208ENST00000624953 CLCN7P51798 805 aa5.12□□□□□ -1.59
CDKL5-208ENST00000624953 PRKCQQ04759 706 aa5.12□□□□□ -1.59
CDKL5-208ENST00000624953 CLCQ05315 142 aa5.12□□□□□ -1.59
CDKL5-208ENST00000624953 APOBRQ0VD83 1088 aa5.12□□□□□ -1.59
CDKL5-208ENST00000624953 IFI16Q16666 785 aaKnown RBP5.12□□□□□ -1.59
CDKL5-208ENST00000624953 ZNF654Q8IZM8 581 aa5.12□□□□□ -1.59
CDKL5-208ENST00000624953 Q96M66 194 aa5.12□□□□□ -1.59
CDKL5-208ENST00000624953 MIPEPQ99797 713 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms