RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 MYO3BQ8WXR4 1341 aa12.03□□□□□ -0.48
ATRX-216ENST00000624403 CCDC196A0A1B0GTZ2 297 aa12.02□□□□□ -0.49
ATRX-216ENST00000624403 NFKBIEO00221 500 aa12.02□□□□□ -0.49
ATRX-216ENST00000624403 DDAH1O94760 285 aa12.02□□□□□ -0.49
ATRX-216ENST00000624403 FMNL1O95466 1100 aaPredicted RBP12.02□□□□□ -0.49
ATRX-216ENST00000624403 TSPY3P0CV98 308 aa12.02□□□□□ -0.49
ATRX-216ENST00000624403 TSPY8P0CW00 308 aa12.02□□□□□ -0.49
ATRX-216ENST00000624403 CALM1P0DP23 149 aa12.02□□□□□ -0.49
ATRX-216ENST00000624403 CALM2P0DP24 149 aa12.02□□□□□ -0.49
ATRX-216ENST00000624403 CALM3P0DP25 149 aa12.02□□□□□ -0.49
ATRX-216ENST00000624403 IFNAR1P17181 557 aa12.02□□□□□ -0.49
ATRX-216ENST00000624403 NCLP19338 710 aaKnown RBP12.02□□□□□ -0.49
ATRX-216ENST00000624403 CFAP100Q494V2 611 aa12.02□□□□□ -0.49
ATRX-216ENST00000624403 CCDC178Q5BJE1 867 aa12.02□□□□□ -0.49
ATRX-216ENST00000624403 RCSD1Q6JBY9 416 aa12.02□□□□□ -0.49
ATRX-216ENST00000624403 FAM173BQ6P4H8 233 aa12.02□□□□□ -0.49
ATRX-216ENST00000624403 TMEM87AQ8NBN3 555 aa12.02□□□□□ -0.49
ATRX-216ENST00000624403 ANKS1AQ92625 1134 aa12.02□□□□□ -0.49
ATRX-216ENST00000624403 C8orf76Q96K31 380 aa12.02□□□□□ -0.49
ATRX-216ENST00000624403 SLC26A6Q9BXS9 759 aa12.02□□□□□ -0.49
ATRX-216ENST00000624403 GDPD2Q9HCC8 539 aa12.02□□□□□ -0.49
ATRX-216ENST00000624403 TCP11L1Q9NUJ3 509 aa12.02□□□□□ -0.49
ATRX-216ENST00000624403 BCS1LQ9Y276 419 aa12.02□□□□□ -0.49
ATRX-216ENST00000624403 VPS9D1Q9Y2B5 631 aa12.02□□□□□ -0.49
ATRX-216ENST00000624403 STK36Q9NRP7 1315 aa12.02□□□□□ -0.49
ATRX-216ENST00000624403 BRCA1P38398 1863 aaKnown RBP12.02□□□□□ -0.49
ATRX-216ENST00000624403 CACNB3P54284 484 aa12.01□□□□□ -0.49
ATRX-216ENST00000624403 GABPAQ06546 454 aa12.01□□□□□ -0.49
ATRX-216ENST00000624403 SSRP1Q08945 709 aaKnown RBP12.01□□□□□ -0.49
ATRX-216ENST00000624403 TROAPQ12815 778 aa12.01□□□□□ -0.49
ATRX-216ENST00000624403 PPP2R5BQ15173 497 aa12.01□□□□□ -0.49
ATRX-216ENST00000624403 OTUD7BQ6GQQ9 843 aa12.01□□□□□ -0.49
ATRX-216ENST00000624403 NBPF11Q86T75 865 aa12.01□□□□□ -0.49
ATRX-216ENST00000624403 USP48Q86UV5 1035 aa12.01□□□□□ -0.49
ATRX-216ENST00000624403 DGKHQ86XP1 1220 aa12.01□□□□□ -0.49
ATRX-216ENST00000624403 ZFPM1Q8IX07 1006 aa12.01□□□□□ -0.49
ATRX-216ENST00000624403 NLGN2Q8NFZ4 835 aa12.01□□□□□ -0.49
ATRX-216ENST00000624403 NEDD1Q8NHV4 660 aa12.01□□□□□ -0.49
ATRX-216ENST00000624403 AIFM3Q96NN9 605 aa12.01□□□□□ -0.49
ATRX-216ENST00000624403 ALG1Q9BT22 464 aa12.01□□□□□ -0.49
ATRX-216ENST00000624403 IDI2Q9BXS1 227 aa12.01□□□□□ -0.49
ATRX-216ENST00000624403 ZSCAN16Q9H4T2 348 aaPredicted RBP12.01□□□□□ -0.49
ATRX-216ENST00000624403 FAM198AQ9UFP1 575 aa12.01□□□□□ -0.49
ATRX-216ENST00000624403 DDX49Q9Y6V7 483 aaKnown RBP12.01□□□□□ -0.49
ATRX-216ENST00000624403 PSME4Q14997 1843 aa12.01□□□□□ -0.49
ATRX-216ENST00000624403 MYH1P12882 1939 aa12□□□□□ -0.49
ATRX-216ENST00000624403 FIBPO43427 364 aa12□□□□□ -0.49
ATRX-216ENST00000624403 CXCL9Q07325 125 aa12□□□□□ -0.49
ATRX-216ENST00000624403 KLHL40Q2TBA0 621 aa12□□□□□ -0.49
ATRX-216ENST00000624403 CMTR1Q8N1G2 835 aaKnown RBP12□□□□□ -0.49
ATRX-216ENST00000624403 CRACR2BQ8N4Y2 399 aaPredicted RBP12□□□□□ -0.49
ATRX-216ENST00000624403 RGS22Q8NE09 1264 aa12□□□□□ -0.49
ATRX-216ENST00000624403 FBXO18Q8NFZ0 1043 aa12□□□□□ -0.49
ATRX-216ENST00000624403 GPT2Q8TD30 523 aa12□□□□□ -0.49
ATRX-216ENST00000624403 DDX12PQ92771 950 aa12□□□□□ -0.49
ATRX-216ENST00000624403 PRMT6Q96LA8 375 aaPredicted RBP12□□□□□ -0.49
ATRX-216ENST00000624403 GZF1Q9H116 711 aaPredicted RBP12□□□□□ -0.49
ATRX-216ENST00000624403 TDRD3Q9H7E2 651 aaKnown RBP12□□□□□ -0.49
ATRX-216ENST00000624403 KAT14Q9H8E8 782 aa12□□□□□ -0.49
ATRX-216ENST00000624403 GJB4Q9NTQ9 266 aa12□□□□□ -0.49
ATRX-216ENST00000624403 RBM28Q9NW13 759 aaKnown RBP12□□□□□ -0.49
ATRX-216ENST00000624403 UBE2Q2LH0YL09 131 aa11.99□□□□□ -0.49
ATRX-216ENST00000624403 GADD45BO75293 160 aaPredicted RBP11.99□□□□□ -0.49
ATRX-216ENST00000624403 PLEKHA8P1O95397 391 aa11.99□□□□□ -0.49
ATRX-216ENST00000624403 HLA-DOAP06340 250 aa11.99□□□□□ -0.49
ATRX-216ENST00000624403 GUCY1A2P33402 732 aa11.99□□□□□ -0.49
ATRX-216ENST00000624403 KRT85P78386 507 aa11.99□□□□□ -0.49
ATRX-216ENST00000624403 FUT2Q10981 343 aa11.99□□□□□ -0.49
ATRX-216ENST00000624403 TCP10Q12799 353 aa11.99□□□□□ -0.49
ATRX-216ENST00000624403 CSPP1Q1MSJ5 1256 aa11.99□□□□□ -0.49
ATRX-216ENST00000624403 TYW1BQ6NUM6 668 aa11.99□□□□□ -0.49
ATRX-216ENST00000624403 TMTC3Q6ZXV5 915 aa11.99□□□□□ -0.49
ATRX-216ENST00000624403 SH3BP5LQ7L8J4 393 aa11.99□□□□□ -0.49
ATRX-216ENST00000624403 TRIM22Q8IYM9 498 aa11.99□□□□□ -0.49
ATRX-216ENST00000624403 WASF1Q92558 559 aa11.99□□□□□ -0.49
ATRX-216ENST00000624403 EHD4Q9H223 541 aa11.99□□□□□ -0.49
ATRX-216ENST00000624403 SWAP70Q9UH65 585 aa11.99□□□□□ -0.49
ATRX-216ENST00000624403 SERPINB13Q9UIV8 391 aa11.99□□□□□ -0.49
ATRX-216ENST00000624403 HDAC9Q9UKV0 1011 aa11.99□□□□□ -0.49
ATRX-216ENST00000624403 LTBP3Q9NS15 1303 aa11.99□□□□□ -0.49
ATRX-216ENST00000624403 ECM29Q5VYK3 1845 aa11.99□□□□□ -0.49
ATRX-216ENST00000624403 FER1L6Q2WGJ9 1857 aa11.99□□□□□ -0.49
ATRX-216ENST00000624403 PLIN4Q96Q06 1357 aa11.98□□□□□ -0.49
ATRX-216ENST00000624403 DDTLA6NHG4 134 aaPredicted RBP11.98□□□□□ -0.49
ATRX-216ENST00000624403 ENTPD3O75355 529 aa11.98□□□□□ -0.49
ATRX-216ENST00000624403 AKR1B1P15121 316 aa11.98□□□□□ -0.49
ATRX-216ENST00000624403 SHMT1P34896 483 aa11.98□□□□□ -0.49
ATRX-216ENST00000624403 RASSF7Q02833 373 aa11.98□□□□□ -0.49
ATRX-216ENST00000624403 DLGAP5Q15398 846 aa11.98□□□□□ -0.49
ATRX-216ENST00000624403 KRT40Q6A162 431 aa11.98□□□□□ -0.49
ATRX-216ENST00000624403 CIAPIN1Q6FI81 312 aa11.98□□□□□ -0.49
ATRX-216ENST00000624403 CCDC82Q8N4S0 544 aa11.98□□□□□ -0.49
ATRX-216ENST00000624403 PNMA1Q8ND90 353 aa11.98□□□□□ -0.49
ATRX-216ENST00000624403 AGBL3Q8NEM8 1001 aa11.98□□□□□ -0.49
ATRX-216ENST00000624403 CTCFLQ8NI51 663 aaPredicted RBP11.98□□□□□ -0.49
ATRX-216ENST00000624403 JDP2Q8WYK2 163 aa11.98□□□□□ -0.49
ATRX-216ENST00000624403 TMEM47Q9BQJ4 181 aa11.98□□□□□ -0.49
ATRX-216ENST00000624403 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.98□□□□□ -0.49
ATRX-216ENST00000624403 DHX36Q9H2U1 1008 aaKnown RBP11.98□□□□□ -0.49
ATRX-216ENST00000624403 SPON1Q9HCB6 807 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms