RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 IFT74Q96LB3 600 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 PARP3Q9Y6F1 533 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 NDUFA10O95299 355 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 HOOK3Q86VS8 718 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 DDX12PQ92771 950 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 PLIN2Q99541 437 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 FAM184BQ9ULE4 1060 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 STX8Q9UNK0 236 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 WDR19Q8NEZ3 1342 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 PTPRMP28827 1452 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 ENC1O14682 589 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 ITGA6P23229 1130 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 ST5P78524 1137 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 ALS2CLQ60I27 953 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 FMNL3Q8IVF7 1028 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 SYMPKQ92797 1274 aaKnown RBP13.16□□□□□ -0.3
ATRX-214ENST00000624166 FAM89AQ96GI7 184 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 NAP1L3Q99457 506 aaPredicted RBP13.16□□□□□ -0.3
ATRX-214ENST00000624166 ALKQ9UM73 1620 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 TLDC2A0PJX2 215 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 M0R2C6 588 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 CLGNO14967 610 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 MMP1P03956 469 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 LDHCP07864 332 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 SLC8A1P32418 973 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 LACTBP83111 547 aaPredicted RBP13.16□□□□□ -0.3
ATRX-214ENST00000624166 C2CD5Q86YS7 1000 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.16□□□□□ -0.3
ATRX-214ENST00000624166 LPIN2Q92539 896 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 OSBP2Q969R2 916 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 PSMB7Q99436 277 aa13.16□□□□□ -0.3
ATRX-214ENST00000624166 BAG3O95817 575 aa13.15□□□□□ -0.3
ATRX-214ENST00000624166 PTPREP23469 700 aa13.15□□□□□ -0.3
ATRX-214ENST00000624166 ATP1A2P50993 1020 aa13.15□□□□□ -0.3
ATRX-214ENST00000624166 TYW1BQ6NUM6 668 aa13.15□□□□□ -0.3
ATRX-214ENST00000624166 CERS3Q8IU89 383 aa13.15□□□□□ -0.3
ATRX-214ENST00000624166 CCDC170Q8IYT3 715 aa13.15□□□□□ -0.3
ATRX-214ENST00000624166 ZNF579Q8NAF0 562 aaKnown RBP13.15□□□□□ -0.3
ATRX-214ENST00000624166 TBC1D5Q92609 795 aa13.15□□□□□ -0.3
ATRX-214ENST00000624166 ATG3Q9NT62 314 aa13.15□□□□□ -0.3
ATRX-214ENST00000624166 SH2B2O14492 632 aaPredicted RBP13.15□□□□□ -0.3
ATRX-214ENST00000624166 RPN1P04843 607 aaKnown RBP13.15□□□□□ -0.3
ATRX-214ENST00000624166 IFNL3Q8IZI9 196 aa13.15□□□□□ -0.3
ATRX-214ENST00000624166 CACNA2D3Q8IZS8 1091 aa13.15□□□□□ -0.3
ATRX-214ENST00000624166 ZNF76P36508 570 aa13.15□□□□□ -0.3
ATRX-214ENST00000624166 RAPGEF1Q13905 1077 aa13.15□□□□□ -0.3
ATRX-214ENST00000624166 LRRC24Q50LG9 513 aa13.15□□□□□ -0.3
ATRX-214ENST00000624166 HNRNPLLQ8WVV9 542 aaKnown RBP13.15□□□□□ -0.3
ATRX-214ENST00000624166 CCDC77Q9BR77 488 aa13.15□□□□□ -0.3
ATRX-214ENST00000624166 RWDD2AQ9UIY3 292 aa13.15□□□□□ -0.3
ATRX-214ENST00000624166 TUBE1Q9UJT0 475 aa13.15□□□□□ -0.3
ATRX-214ENST00000624166 PPRC1Q5VV67 1664 aaKnown RBP13.14□□□□□ -0.31
ATRX-214ENST00000624166 EXOSC10Q01780 885 aaKnown RBP13.14□□□□□ -0.31
ATRX-214ENST00000624166 STXBP4Q6ZWJ1 553 aa13.14□□□□□ -0.31
ATRX-214ENST00000624166 HELBQ8NG08 1087 aaPredicted RBP13.14□□□□□ -0.31
ATRX-214ENST00000624166 PPANQ9NQ55 473 aaKnown RBP13.14□□□□□ -0.31
ATRX-214ENST00000624166 RNF14Q9UBS8 474 aa13.14□□□□□ -0.31
ATRX-214ENST00000624166 ZC3H13Q5T200 1668 aaKnown RBP13.14□□□□□ -0.31
ATRX-214ENST00000624166 TRAF5O00463 557 aa13.14□□□□□ -0.31
ATRX-214ENST00000624166 TSPY3P0CV98 308 aa13.14□□□□□ -0.31
ATRX-214ENST00000624166 TSPY8P0CW00 308 aa13.14□□□□□ -0.31
ATRX-214ENST00000624166 PDE6AP16499 860 aa13.14□□□□□ -0.31
ATRX-214ENST00000624166 LIFRP42702 1097 aa13.14□□□□□ -0.31
ATRX-214ENST00000624166 SF3B2Q13435 895 aaKnown RBP13.14□□□□□ -0.31
ATRX-214ENST00000624166 RPS6KA1Q15418 735 aa13.14□□□□□ -0.31
ATRX-214ENST00000624166 NCAPH2Q6IBW4 605 aa13.14□□□□□ -0.31
ATRX-214ENST00000624166 RNF26Q9BY78 433 aaPredicted RBP13.14□□□□□ -0.31
ATRX-214ENST00000624166 VIPAS39Q9H9C1 493 aa13.14□□□□□ -0.31
ATRX-214ENST00000624166 VAT1LQ9HCJ6 419 aa13.14□□□□□ -0.31
ATRX-214ENST00000624166 BUB1BO60566 1050 aaPredicted RBP13.14□□□□□ -0.31
ATRX-214ENST00000624166 EMBQ6PCB8 327 aa13.14□□□□□ -0.31
ATRX-214ENST00000624166 UTP11Q9Y3A2 253 aaKnown RBP13.14□□□□□ -0.31
ATRX-214ENST00000624166 DPF2Q92785 391 aa13.13□□□□□ -0.31
ATRX-214ENST00000624166 FRMPD1Q5SYB0 1578 aa13.13□□□□□ -0.31
ATRX-214ENST00000624166 ROBO2Q9HCK4 1378 aa13.13□□□□□ -0.31
ATRX-214ENST00000624166 PARP1P09874 1014 aaKnown RBP13.13□□□□□ -0.31
ATRX-214ENST00000624166 TRAPPC10P48553 1259 aa13.13□□□□□ -0.31
ATRX-214ENST00000624166 CHRNA2Q15822 529 aa13.13□□□□□ -0.31
ATRX-214ENST00000624166 RRAGAQ7L523 313 aa13.13□□□□□ -0.31
ATRX-214ENST00000624166 GRAMD1CQ8IYS0 662 aa13.13□□□□□ -0.31
ATRX-214ENST00000624166 KCND1Q9NSA2 647 aa13.13□□□□□ -0.31
ATRX-214ENST00000624166 MYO3AQ8NEV4 1616 aa13.13□□□□□ -0.31
ATRX-214ENST00000624166 A2ML1A8K2U0 1454 aa13.13□□□□□ -0.31
ATRX-214ENST00000624166 ACTN4O43707 911 aaKnown RBP13.13□□□□□ -0.31
ATRX-214ENST00000624166 TBC1D8O95759 1140 aa13.13□□□□□ -0.31
ATRX-214ENST00000624166 VIMP08670 466 aaKnown RBP13.13□□□□□ -0.31
ATRX-214ENST00000624166 KRT13P13646 458 aa13.13□□□□□ -0.31
ATRX-214ENST00000624166 LONP1P36776 959 aaKnown RBP13.13□□□□□ -0.31
ATRX-214ENST00000624166 GKAP1Q5VSY0 366 aaPredicted RBP13.13□□□□□ -0.31
ATRX-214ENST00000624166 KLHL7Q8IXQ5 586 aa13.13□□□□□ -0.31
ATRX-214ENST00000624166 ERMNQ8TAM6 284 aa13.13□□□□□ -0.31
ATRX-214ENST00000624166 FAM169AQ9Y6X4 670 aa13.13□□□□□ -0.31
ATRX-214ENST00000624166 DLC1Q96QB1 1528 aa13.13□□□□□ -0.31
ATRX-214ENST00000624166 POTEJP0CG39 1038 aa13.13□□□□□ -0.31
ATRX-214ENST00000624166 NEDD9Q14511 834 aa13.13□□□□□ -0.31
ATRX-214ENST00000624166 E2F4Q16254 413 aa13.13□□□□□ -0.31
ATRX-214ENST00000624166 GPHNQ9NQX3 736 aaPredicted RBP13.13□□□□□ -0.31
ATRX-214ENST00000624166 AATFQ9NY61 560 aaKnown RBP eCLIP13.13□□□□□ -0.31
ATRX-214ENST00000624166 CTDP1Q9Y5B0 961 aaPredicted RBP13.13□□□□□ -0.31
ATRX-214ENST00000624166 ANO9A1A5B4 782 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 227.8 ms