RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 KAT14Q9H8E8 782 aa9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 MKRN1Q9UHC7 482 aaKnown RBP9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 XDHP47989 1333 aa9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 BAG3O95817 575 aa9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 SLFN14P0C7P3 912 aa9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 TRAPPC10P48553 1259 aa9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 NLRP5P59047 1200 aa9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 TFAP4Q01664 338 aa9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 SYCP1Q15431 976 aa9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 ZNF174Q15697 407 aa9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 E4F1Q66K89 784 aaPredicted RBP9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 ZNF804AQ7Z570 1209 aa9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 DGKHQ86XP1 1220 aa9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 AMOTL1Q8IY63 956 aa9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 CNBD1Q8NA66 436 aa9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 ANKS1AQ92625 1134 aa9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 SYMPKQ92797 1274 aaKnown RBP9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 DHX58Q96C10 678 aa9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 EPSTI1Q96J88 318 aa9.49□□□□□ -0.89
SND1-IT1-201ENST00000623342 WNT7AO00755 349 aa9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 TOP1P11387 765 aaKnown RBP9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 ATP2C1P98194 919 aaPredicted RBP9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 FMR1Q06787 632 aaKnown RBP eCLIP9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 ZNF827Q17R98 1081 aa9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 CCDC178Q5BJE1 867 aa9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 NOM1Q5C9Z4 860 aaKnown RBP9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 CT47A1Q5JQC4 288 aaPredicted RBP9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 FAM196AQ6ZSG2 479 aa9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 C15orf52Q6ZUT6 534 aaKnown RBP9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 SH3RF1Q7Z6J0 888 aa9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 SEPT12Q8IYM1 358 aa9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 SH3RF3Q8TEJ3 882 aaPredicted RBP9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 NFE2L3Q9Y4A8 694 aa9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 ROBO3Q96MS0 1386 aa9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 A0A087X0B3 334 aa9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 LDHCP07864 332 aa9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 ZNF18P17022 549 aa9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 CDK11BP21127 795 aaKnown RBP9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 CALML3P27482 149 aa9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 ERCC5P28715 1186 aaPredicted RBP9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 PLCD1P51178 756 aa9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 PPP4CP60510 307 aa9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 PTGDRQ13258 359 aa9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 SLC4A8Q2Y0W8 1093 aa9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 ANKRD7Q92527 254 aa9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 PAGE5Q96GU1 130 aa9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 PPP1R13BQ96KQ4 1090 aa9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 MKNK2Q9HBH9 465 aa9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 IL17RBQ9NRM6 502 aa9.48□□□□□ -0.89
SND1-IT1-201ENST00000623342 VWA3AA6NCI4 1184 aa9.47□□□□□ -0.89
SND1-IT1-201ENST00000623342 TMEM232C9JQI7 657 aa9.47□□□□□ -0.89
SND1-IT1-201ENST00000623342 CCP110O43303 1012 aa9.47□□□□□ -0.89
SND1-IT1-201ENST00000623342 PIK3AP1Q6ZUJ8 805 aa9.47□□□□□ -0.89
SND1-IT1-201ENST00000623342 PNMA1Q8ND90 353 aa9.47□□□□□ -0.89
SND1-IT1-201ENST00000623342 KIF18AQ8NI77 898 aa9.47□□□□□ -0.89
SND1-IT1-201ENST00000623342 DYNLL2Q96FJ2 89 aa9.47□□□□□ -0.89
SND1-IT1-201ENST00000623342 SH3GLB2Q9NR46 395 aa9.47□□□□□ -0.89
SND1-IT1-201ENST00000623342 SPATA31A6Q5VVP1 1343 aa9.47□□□□□ -0.89
SND1-IT1-201ENST00000623342 TUBB4AP04350 444 aa9.47□□□□□ -0.89
SND1-IT1-201ENST00000623342 AFMP43652 599 aa9.47□□□□□ -0.89
SND1-IT1-201ENST00000623342 GNAQP50148 359 aa9.47□□□□□ -0.89
SND1-IT1-201ENST00000623342 GRM4Q14833 912 aa9.47□□□□□ -0.89
SND1-IT1-201ENST00000623342 DIXDC1Q155Q3 683 aa9.47□□□□□ -0.89
SND1-IT1-201ENST00000623342 PRR5LQ6MZQ0 368 aa9.47□□□□□ -0.89
SND1-IT1-201ENST00000623342 CERS3Q8IU89 383 aa9.47□□□□□ -0.89
SND1-IT1-201ENST00000623342 TRMT44Q8IYL2 757 aaKnown RBP9.47□□□□□ -0.89
SND1-IT1-201ENST00000623342 RPGRQ92834 1020 aaKnown RBP9.47□□□□□ -0.89
SND1-IT1-201ENST00000623342 TMX1Q9H3N1 280 aa9.47□□□□□ -0.89
SND1-IT1-201ENST00000623342 TCP11L1Q9NUJ3 509 aa9.47□□□□□ -0.89
SND1-IT1-201ENST00000623342 INTS13Q9NVM9 706 aa9.47□□□□□ -0.89
SND1-IT1-201ENST00000623342 TSPY3P0CV98 308 aa9.46□□□□□ -0.89
SND1-IT1-201ENST00000623342 TSPY8P0CW00 308 aa9.46□□□□□ -0.89
SND1-IT1-201ENST00000623342 VEGFAP15692 232 aaPredicted RBP9.46□□□□□ -0.89
SND1-IT1-201ENST00000623342 GPSM2P81274 684 aa9.46□□□□□ -0.89
SND1-IT1-201ENST00000623342 NCBP1Q09161 790 aaKnown RBP9.46□□□□□ -0.89
SND1-IT1-201ENST00000623342 DPYDQ12882 1025 aa9.46□□□□□ -0.89
SND1-IT1-201ENST00000623342 GRIK5Q16478 980 aa9.46□□□□□ -0.89
SND1-IT1-201ENST00000623342 BLIDQ8IZY5 108 aa9.46□□□□□ -0.89
SND1-IT1-201ENST00000623342 ZNF444Q8N0Y2 327 aaPredicted RBP9.46□□□□□ -0.89
SND1-IT1-201ENST00000623342 TGFBRAP1Q8WUH2 860 aa9.46□□□□□ -0.89
SND1-IT1-201ENST00000623342 GSDMAQ96QA5 445 aa9.46□□□□□ -0.89
SND1-IT1-201ENST00000623342 MED15Q96RN5 788 aa9.46□□□□□ -0.89
SND1-IT1-201ENST00000623342 PYM1Q9BRP8 204 aaKnown RBP9.46□□□□□ -0.89
SND1-IT1-201ENST00000623342 MCM7P33993 719 aa9.46□□□□□ -0.9
SND1-IT1-201ENST00000623342 TBX2Q13207 712 aaPredicted RBP9.46□□□□□ -0.9
SND1-IT1-201ENST00000623342 HSP90AA4PQ58FG1 418 aa9.46□□□□□ -0.9
SND1-IT1-201ENST00000623342 PDCL2Q8N4E4 241 aa9.46□□□□□ -0.9
SND1-IT1-201ENST00000623342 IQUBQ8NA54 791 aa9.46□□□□□ -0.9
SND1-IT1-201ENST00000623342 NAV1Q8NEY1 1877 aa9.46□□□□□ -0.9
SND1-IT1-201ENST00000623342 CCDC94Q9BW85 323 aaPredicted RBP9.46□□□□□ -0.9
SND1-IT1-201ENST00000623342 QTRT2Q9H974 415 aaKnown RBP9.46□□□□□ -0.9
SND1-IT1-201ENST00000623342 MAD2L2Q9UI95 211 aa9.46□□□□□ -0.9
SND1-IT1-201ENST00000623342 PCDHA4Q9UN74 947 aa9.46□□□□□ -0.9
SND1-IT1-201ENST00000623342 USP17L3A6NCW0 530 aa9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 USP17L4A6NCW7 530 aa9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 ATP2B4P23634 1241 aa9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 CRY2Q49AN0 593 aa9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 SPATA1Q5VX52 437 aa9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 ARL6IP4Q66PJ3 421 aaKnown RBP9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 SPECC1LQ69YQ0 1117 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms