RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 PRKCZQ05513 592 aa14.66□□□□□ -0.06
CBWD3-218ENST00000622755 PPARAQ07869 468 aa14.66□□□□□ -0.06
CBWD3-218ENST00000622755 COG2Q14746 738 aa14.66□□□□□ -0.06
CBWD3-218ENST00000622755 SOCS4Q8WXH5 440 aa14.66□□□□□ -0.06
CBWD3-218ENST00000622755 VCPKMTQ9H867 229 aa14.66□□□□□ -0.06
CBWD3-218ENST00000622755 EPB41L4AQ9HCS5 686 aaPredicted RBP14.66□□□□□ -0.06
CBWD3-218ENST00000622755 IVNS1ABPQ9Y6Y0 642 aa14.66□□□□□ -0.06
CBWD3-218ENST00000622755 ZSWIM8A7E2V4 1837 aa14.65□□□□□ -0.06
CBWD3-218ENST00000622755 EEF2P13639 858 aaKnown RBP14.65□□□□□ -0.06
CBWD3-218ENST00000622755 FLT3LGP49771 235 aa14.65□□□□□ -0.06
CBWD3-218ENST00000622755 ERVK-9P63128 1117 aa14.65□□□□□ -0.06
CBWD3-218ENST00000622755 ERVK-24P63145 666 aa14.65□□□□□ -0.06
CBWD3-218ENST00000622755 EVX2Q03828 476 aa14.65□□□□□ -0.06
CBWD3-218ENST00000622755 WDR78Q5VTH9 848 aa14.65□□□□□ -0.06
CBWD3-218ENST00000622755 MB21D1Q8N884 522 aa14.65□□□□□ -0.06
CBWD3-218ENST00000622755 ZNF333Q96JL9 665 aa14.65□□□□□ -0.06
CBWD3-218ENST00000622755 TOMM22Q9NS69 142 aa14.65□□□□□ -0.06
CBWD3-218ENST00000622755 CCDC171Q6TFL3 1326 aa14.65□□□□□ -0.06
CBWD3-218ENST00000622755 TSPY2A6NKD2 308 aa14.64□□□□□ -0.07
CBWD3-218ENST00000622755 ADCY3O60266 1144 aa14.64□□□□□ -0.07
CBWD3-218ENST00000622755 FLOT1O75955 427 aa14.64□□□□□ -0.07
CBWD3-218ENST00000622755 SDSP20132 328 aa14.64□□□□□ -0.07
CBWD3-218ENST00000622755 RASA1P20936 1047 aa14.64□□□□□ -0.07
CBWD3-218ENST00000622755 NMIQ13287 307 aaPredicted RBP14.64□□□□□ -0.07
CBWD3-218ENST00000622755 IRF5Q13568 498 aa14.64□□□□□ -0.07
CBWD3-218ENST00000622755 CCDC129Q6ZRS4 1044 aa14.64□□□□□ -0.07
CBWD3-218ENST00000622755 NKX2-3Q8TAU0 364 aa14.64□□□□□ -0.07
CBWD3-218ENST00000622755 PXYLP1Q8TE99 480 aa14.64□□□□□ -0.07
CBWD3-218ENST00000622755 SH3TC2Q8TF17 1288 aa14.64□□□□□ -0.07
CBWD3-218ENST00000622755 NUDT12Q9BQG2 462 aa14.64□□□□□ -0.07
CBWD3-218ENST00000622755 CTDP1Q9Y5B0 961 aaPredicted RBP14.64□□□□□ -0.07
CBWD3-218ENST00000622755 A0A1W2PRG0 241 aa14.63□□□□□ -0.07
CBWD3-218ENST00000622755 TTLL1O95922 423 aa14.63□□□□□ -0.07
CBWD3-218ENST00000622755 NEFLP07196 543 aa14.63□□□□□ -0.07
CBWD3-218ENST00000622755 SAMD1Q6SPF0 538 aaPredicted RBP14.63□□□□□ -0.07
CBWD3-218ENST00000622755 LBX2Q6XYB7 198 aa14.63□□□□□ -0.07
CBWD3-218ENST00000622755 TRMT44Q8IYL2 757 aaKnown RBP14.63□□□□□ -0.07
CBWD3-218ENST00000622755 SPICE1Q8N0Z3 855 aa14.63□□□□□ -0.07
CBWD3-218ENST00000622755 RUFY2Q8WXA3 655 aa14.63□□□□□ -0.07
CBWD3-218ENST00000622755 FAM227BQ96M60 508 aa14.63□□□□□ -0.07
CBWD3-218ENST00000622755 NYAP2Q9P242 653 aa14.63□□□□□ -0.07
CBWD3-218ENST00000622755 A0A0D9SFI3 127 aa14.62□□□□□ -0.07
CBWD3-218ENST00000622755 PRDM1O75626 825 aa14.62□□□□□ -0.07
CBWD3-218ENST00000622755 MYCP01106 439 aaPredicted RBP14.62□□□□□ -0.07
CBWD3-218ENST00000622755 PCP11498 1178 aaKnown RBP14.62□□□□□ -0.07
CBWD3-218ENST00000622755 CTGFP29279 349 aa14.62□□□□□ -0.07
CBWD3-218ENST00000622755 ALX1Q15699 326 aa14.62□□□□□ -0.07
CBWD3-218ENST00000622755 CWC27Q6UX04 472 aaKnown RBP14.62□□□□□ -0.07
CBWD3-218ENST00000622755 RBPJLQ9UBG7 517 aa14.62□□□□□ -0.07
CBWD3-218ENST00000622755 ISY1Q9ULR0 285 aaKnown RBP14.62□□□□□ -0.07
CBWD3-218ENST00000622755 SYNPO2Q9UMS6 1093 aa14.62□□□□□ -0.07
CBWD3-218ENST00000622755 GABRQQ9UN88 632 aa14.62□□□□□ -0.07
CBWD3-218ENST00000622755 RBBP6Q7Z6E9 1792 aaKnown RBP14.62□□□□□ -0.07
CBWD3-218ENST00000622755 RANBP6O60518 1105 aaKnown RBP14.61□□□□□ -0.07
CBWD3-218ENST00000622755 CAPN2P17655 700 aa14.61□□□□□ -0.07
CBWD3-218ENST00000622755 RGS2P41220 211 aa14.61□□□□□ -0.07
CBWD3-218ENST00000622755 CAP1Q01518 475 aa14.61□□□□□ -0.07
CBWD3-218ENST00000622755 TFAP4Q01664 338 aa14.61□□□□□ -0.07
CBWD3-218ENST00000622755 PLS1Q14651 629 aa14.61□□□□□ -0.07
CBWD3-218ENST00000622755 PLEKHH3Q7Z736 793 aa14.61□□□□□ -0.07
CBWD3-218ENST00000622755 CLEC10AQ8IUN9 316 aa14.61□□□□□ -0.07
CBWD3-218ENST00000622755 RNF41Q9H4P4 317 aaPredicted RBP14.61□□□□□ -0.07
CBWD3-218ENST00000622755 CLIP2Q9UDT6 1046 aa14.61□□□□□ -0.07
CBWD3-218ENST00000622755 ZMYM6O95789 1325 aa14.61□□□□□ -0.07
CBWD3-218ENST00000622755 MYH4Q9Y623 1939 aa14.61□□□□□ -0.07
CBWD3-218ENST00000622755 SPDYE16A6NNV3 312 aaPredicted RBP14.6□□□□□ -0.07
CBWD3-218ENST00000622755 HSPD1P10809 573 aaKnown RBP14.6□□□□□ -0.07
CBWD3-218ENST00000622755 NT5C2P49902 561 aa14.6□□□□□ -0.07
CBWD3-218ENST00000622755 NEDD1Q8NHV4 660 aa14.6□□□□□ -0.07
CBWD3-218ENST00000622755 RNF208Q9H0X6 261 aa14.6□□□□□ -0.07
CBWD3-218ENST00000622755 TXNRD2Q9NNW7 524 aa14.6□□□□□ -0.07
CBWD3-218ENST00000622755 SLC5A4Q9NY91 659 aa14.6□□□□□ -0.07
CBWD3-218ENST00000622755 CTNNA3Q9UI47 895 aa14.6□□□□□ -0.07
CBWD3-218ENST00000622755 ANAPC4Q9UJX5 808 aa14.6□□□□□ -0.07
CBWD3-218ENST00000622755 PLIN4Q96Q06 1357 aa14.59□□□□□ -0.07
CBWD3-218ENST00000622755 SMIM22K7EJ46 135 aa14.59□□□□□ -0.07
CBWD3-218ENST00000622755 ZNF213O14771 459 aa14.59□□□□□ -0.07
CBWD3-218ENST00000622755 FGAP02671 866 aa14.59□□□□□ -0.07
CBWD3-218ENST00000622755 HMGCRP04035 888 aa14.59□□□□□ -0.07
CBWD3-218ENST00000622755 DSG3P32926 999 aa14.59□□□□□ -0.07
CBWD3-218ENST00000622755 COPB2P35606 906 aa14.59□□□□□ -0.07
CBWD3-218ENST00000622755 CTDSPL2Q05D32 466 aa14.59□□□□□ -0.07
CBWD3-218ENST00000622755 RRP12Q5JTH9 1297 aaKnown RBP14.59□□□□□ -0.07
CBWD3-218ENST00000622755 TTC22Q5TAA0 569 aa14.59□□□□□ -0.07
CBWD3-218ENST00000622755 VPS53Q5VIR6 699 aa14.59□□□□□ -0.07
CBWD3-218ENST00000622755 MFSD6Q6ZSS7 791 aa14.59□□□□□ -0.07
CBWD3-218ENST00000622755 GPR142Q7Z601 462 aa14.59□□□□□ -0.07
CBWD3-218ENST00000622755 CEP95Q96GE4 821 aa14.59□□□□□ -0.07
CBWD3-218ENST00000622755 MTMR4Q9NYA4 1195 aa14.59□□□□□ -0.07
CBWD3-218ENST00000622755 STX8Q9UNK0 236 aa14.59□□□□□ -0.07
CBWD3-218ENST00000622755 GREB1LQ9C091 1923 aaPredicted RBP14.58□□□□□ -0.07
CBWD3-218ENST00000622755 F5H6K3 240 aa14.58□□□□□ -0.07
CBWD3-218ENST00000622755 STRNO43815 780 aa14.58□□□□□ -0.07
CBWD3-218ENST00000622755 SLC25A27O95847 323 aa14.58□□□□□ -0.07
CBWD3-218ENST00000622755 INHAP05111 366 aa14.58□□□□□ -0.07
CBWD3-218ENST00000622755 ELNP15502 786 aa14.58□□□□□ -0.07
CBWD3-218ENST00000622755 ZKSCAN1P17029 563 aaPredicted RBP14.58□□□□□ -0.07
CBWD3-218ENST00000622755 CYP2B6P20813 491 aa14.58□□□□□ -0.07
CBWD3-218ENST00000622755 KLRC3Q07444 240 aa14.58□□□□□ -0.07
CBWD3-218ENST00000622755 IKQ13123 557 aaPredicted RBP14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms