RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 ALDH8A1Q9H2A2 487 aaPredicted RBP23.3■■□□□ 1.32
PDLIM2-221ENST00000622702 TSKSQ9UJT2 592 aa23.3■■□□□ 1.32
PDLIM2-221ENST00000622702 KCNH4Q9UQ05 1017 aa23.3■■□□□ 1.32
PDLIM2-221ENST00000622702 ERICH2A1L162 156 aa23.3■■□□□ 1.32
PDLIM2-221ENST00000622702 USP17L5A8MUK1 530 aa23.3■■□□□ 1.32
PDLIM2-221ENST00000622702 IGF2BP3O00425 579 aaKnown RBP eCLIP23.3■■□□□ 1.32
PDLIM2-221ENST00000622702 SH2B2O14492 632 aaPredicted RBP23.3■■□□□ 1.32
PDLIM2-221ENST00000622702 CXCL11O14625 94 aa23.3■■□□□ 1.32
PDLIM2-221ENST00000622702 ICA1Q05084 483 aa23.3■■□□□ 1.32
PDLIM2-221ENST00000622702 TMEM67Q5HYA8 995 aa23.3■■□□□ 1.32
PDLIM2-221ENST00000622702 PTPN18Q99952 460 aa23.3■■□□□ 1.32
PDLIM2-221ENST00000622702 PDRG1Q9NUG6 133 aa23.3■■□□□ 1.32
PDLIM2-221ENST00000622702 NYAP2Q9P242 653 aa23.3■■□□□ 1.32
PDLIM2-221ENST00000622702 TTLL1O95922 423 aa23.29■■□□□ 1.32
PDLIM2-221ENST00000622702 LIFRP42702 1097 aa23.29■■□□□ 1.32
PDLIM2-221ENST00000622702 CTCFP49711 727 aaPredicted RBP23.29■■□□□ 1.32
PDLIM2-221ENST00000622702 CLEC10AQ8IUN9 316 aa23.29■■□□□ 1.32
PDLIM2-221ENST00000622702 SIAH1Q8IUQ4 282 aa23.29■■□□□ 1.32
PDLIM2-221ENST00000622702 LRRC2Q9BYS8 371 aa23.29■■□□□ 1.32
PDLIM2-221ENST00000622702 TBC1D2Q9BYX2 928 aa23.29■■□□□ 1.32
PDLIM2-221ENST00000622702 SAGE1Q9NXZ1 904 aa23.29■■□□□ 1.32
PDLIM2-221ENST00000622702 TRIM75PA6NK02 468 aa23.28■■□□□ 1.32
PDLIM2-221ENST00000622702 WTAPQ15007 396 aa23.28■■□□□ 1.32
PDLIM2-221ENST00000622702 OTUD7BQ6GQQ9 843 aa23.28■■□□□ 1.32
PDLIM2-221ENST00000622702 Q6ZUG5 572 aa23.28■■□□□ 1.32
PDLIM2-221ENST00000622702 TMTC2Q8N394 836 aa23.28■■□□□ 1.32
PDLIM2-221ENST00000622702 LY9Q9HBG7 655 aa23.28■■□□□ 1.32
PDLIM2-221ENST00000622702 GPHNQ9NQX3 736 aaPredicted RBP23.28■■□□□ 1.32
PDLIM2-221ENST00000622702 STX8Q9UNK0 236 aa23.28■■□□□ 1.32
PDLIM2-221ENST00000622702 HSPA8P11142 646 aaKnown RBP23.27■■□□□ 1.32
PDLIM2-221ENST00000622702 EEF2P13639 858 aaKnown RBP23.27■■□□□ 1.32
PDLIM2-221ENST00000622702 SPP2Q13103 211 aa23.27■■□□□ 1.32
PDLIM2-221ENST00000622702 IFIT1BQ5T764 474 aaKnown RBP23.27■■□□□ 1.32
PDLIM2-221ENST00000622702 ZNF280CQ8ND82 737 aa23.27■■□□□ 1.32
PDLIM2-221ENST00000622702 MKL1Q969V6 931 aa23.27■■□□□ 1.32
PDLIM2-221ENST00000622702 WDR18Q9BV38 432 aa23.27■■□□□ 1.32
PDLIM2-221ENST00000622702 AS3MTQ9HBK9 375 aa23.27■■□□□ 1.32
PDLIM2-221ENST00000622702 SYNPO2Q9UMS6 1093 aa23.27■■□□□ 1.32
PDLIM2-221ENST00000622702 ALDH1A1P00352 501 aa23.26■■□□□ 1.31
PDLIM2-221ENST00000622702 TOP1P11387 765 aaKnown RBP23.26■■□□□ 1.31
PDLIM2-221ENST00000622702 FGD1P98174 961 aa23.26■■□□□ 1.31
PDLIM2-221ENST00000622702 SGMS1Q86VZ5 419 aa23.26■■□□□ 1.31
PDLIM2-221ENST00000622702 CLIP2Q9UDT6 1046 aa23.26■■□□□ 1.31
PDLIM2-221ENST00000622702 LBX1P52954 281 aa23.25■■□□□ 1.31
PDLIM2-221ENST00000622702 TOB2Q14106 344 aaPredicted RBP23.25■■□□□ 1.31
PDLIM2-221ENST00000622702 ANKRD1Q15327 319 aa23.25■■□□□ 1.31
PDLIM2-221ENST00000622702 TMEM47Q9BQJ4 181 aa23.25■■□□□ 1.31
PDLIM2-221ENST00000622702 SENP2Q9HC62 589 aa23.25■■□□□ 1.31
PDLIM2-221ENST00000622702 ARHGEF10LQ9HCE6 1279 aa23.25■■□□□ 1.31
PDLIM2-221ENST00000622702 PTPRFP10586 1907 aa23.25■■□□□ 1.31
PDLIM2-221ENST00000622702 A0A0G2JLL6 359 aaPredicted RBP23.24■■□□□ 1.31
PDLIM2-221ENST00000622702 BTBD19C9JJ37 291 aa23.24■■□□□ 1.31
PDLIM2-221ENST00000622702 ST18O60284 1047 aa23.24■■□□□ 1.31
PDLIM2-221ENST00000622702 TBC1D8O95759 1140 aa23.24■■□□□ 1.31
PDLIM2-221ENST00000622702 MOGSQ13724 837 aa23.24■■□□□ 1.31
PDLIM2-221ENST00000622702 PRRT2Q7Z6L0 340 aaPredicted RBP23.24■■□□□ 1.31
PDLIM2-221ENST00000622702 FAM43AQ8N2R8 423 aa23.24■■□□□ 1.31
PDLIM2-221ENST00000622702 ACER1Q8TDN7 264 aa23.24■■□□□ 1.31
PDLIM2-221ENST00000622702 BRF1Q92994 677 aa23.24■■□□□ 1.31
PDLIM2-221ENST00000622702 SH2D4AQ9H788 454 aa23.24■■□□□ 1.31
PDLIM2-221ENST00000622702 TMX2Q9Y320 296 aa23.24■■□□□ 1.31
PDLIM2-221ENST00000622702 A0A1W2PRG0 241 aa23.24■■□□□ 1.31
PDLIM2-221ENST00000622702 AK2P54819 239 aa23.24■■□□□ 1.31
PDLIM2-221ENST00000622702 EVCP57679 992 aa23.24■■□□□ 1.31
PDLIM2-221ENST00000622702 ATP2B2Q01814 1243 aa23.24■■□□□ 1.31
PDLIM2-221ENST00000622702 GADL1Q6ZQY3 521 aa23.23■■□□□ 1.31
PDLIM2-221ENST00000622702 FASTKD5Q7L8L6 764 aaKnown RBP23.23■■□□□ 1.31
PDLIM2-221ENST00000622702 KIAA1683Q9H0B3 1180 aa23.23■■□□□ 1.31
PDLIM2-221ENST00000622702 KAT14Q9H8E8 782 aa23.23■■□□□ 1.31
PDLIM2-221ENST00000622702 MYH4Q9Y623 1939 aa23.22■■□□□ 1.31
PDLIM2-221ENST00000622702 LRRC47Q8N1G4 583 aaKnown RBP23.22■■□□□ 1.31
PDLIM2-221ENST00000622702 PNMA1Q8ND90 353 aa23.22■■□□□ 1.31
PDLIM2-221ENST00000622702 CCDC69A6NI79 296 aa23.21■■□□□ 1.31
PDLIM2-221ENST00000622702 USP17L10C9JJH3 530 aa23.21■■□□□ 1.31
PDLIM2-221ENST00000622702 MTMR2Q13614 643 aa23.21■■□□□ 1.31
PDLIM2-221ENST00000622702 NFXL1Q6ZNB6 911 aa23.21■■□□□ 1.31
PDLIM2-221ENST00000622702 ANKRD23Q86SG2 305 aa23.21■■□□□ 1.31
PDLIM2-221ENST00000622702 GMCL1P1Q8NEA9 526 aa23.21■■□□□ 1.31
PDLIM2-221ENST00000622702 CFHR5Q9BXR6 569 aa23.21■■□□□ 1.31
PDLIM2-221ENST00000622702 R3HDMLQ9H3Y0 253 aa23.21■■□□□ 1.31
PDLIM2-221ENST00000622702 HMGCS2P54868 508 aa23.2■■□□□ 1.3
PDLIM2-221ENST00000622702 BACE1P56817 501 aa23.2■■□□□ 1.3
PDLIM2-221ENST00000622702 APOBRQ0VD83 1088 aa23.2■■□□□ 1.3
PDLIM2-221ENST00000622702 CRHR2Q13324 411 aa23.2■■□□□ 1.3
PDLIM2-221ENST00000622702 DGKZQ13574 1117 aa23.2■■□□□ 1.3
PDLIM2-221ENST00000622702 TAF1CQ15572 869 aaPredicted RBP23.2■■□□□ 1.3
PDLIM2-221ENST00000622702 GPAT2Q6NUI2 795 aa23.2■■□□□ 1.3
PDLIM2-221ENST00000622702 APOA5Q6Q788 366 aa23.2■■□□□ 1.3
PDLIM2-221ENST00000622702 FEZ1Q99689 392 aa23.2■■□□□ 1.3
PDLIM2-221ENST00000622702 ZCCHC17Q9NP64 241 aaKnown RBP23.2■■□□□ 1.3
PDLIM2-221ENST00000622702 BRPF3Q9ULD4 1205 aa23.2■■□□□ 1.3
PDLIM2-221ENST00000622702 SLC12A7Q9Y666 1083 aa23.2■■□□□ 1.3
PDLIM2-221ENST00000622702 C19orf81C9J6K1 198 aa23.19■■□□□ 1.3
PDLIM2-221ENST00000622702 PDHXO00330 501 aa23.19■■□□□ 1.3
PDLIM2-221ENST00000622702 DDAH1O94760 285 aa23.19■■□□□ 1.3
PDLIM2-221ENST00000622702 MCM2P49736 904 aa23.19■■□□□ 1.3
PDLIM2-221ENST00000622702 RCAN1P53805 252 aa23.19■■□□□ 1.3
PDLIM2-221ENST00000622702 USP14P54578 494 aa23.19■■□□□ 1.3
PDLIM2-221ENST00000622702 TROAPQ12815 778 aa23.19■■□□□ 1.3
PDLIM2-221ENST00000622702 CATIPQ7Z7H3 387 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms