RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 EHMT1Q9H9B1 1298 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 EXOC1Q9NV70 894 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 SPATA31A3Q5VYP0 1347 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 WDR17Q8IZU2 1322 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 PSDA5PKW4 1024 aaPredicted RBP9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 ADD2P35612 726 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 MYL5Q02045 173 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 ERCC6LQ2NKX8 1250 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 UBXN4Q92575 508 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 RRP36Q96EU6 259 aaKnown RBP9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 OSBPL5Q9H0X9 879 aaPredicted RBP9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 GOLGA8HP0CJ92 632 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 PDE6AP16499 860 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 HLTFQ14527 1009 aaKnown RBP eCLIP9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 CARD10Q9BWT7 1032 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 GTPBP4Q9BZE4 634 aaKnown RBP9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 CNNM2Q9H8M5 875 aa9.32□□□□□ -0.92
PTPDC1-204ENST00000620992 RP1L1Q8IWN7 2480 aaPredicted RBP9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 ARFGEF2Q9Y6D5 1785 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 RXRBP28702 533 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 TXKP42681 527 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 EVCP57679 992 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 TFAP4Q01664 338 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 CETN1Q12798 172 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 KMT5BQ4FZB7 885 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 PARP10Q53GL7 1025 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 NKX2-3Q8TAU0 364 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 KIFC2Q96AC6 838 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 ACBD3Q9H3P7 528 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 BCCIPQ9P287 314 aaKnown RBP eCLIP9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 KCNJ14Q9UNX9 436 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 IVNS1ABPQ9Y6Y0 642 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 ERLIN2O94905 339 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 FBXO38Q6PIJ6 1188 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 SHC4Q6S5L8 630 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 DPF2Q92785 391 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 PLCD4Q9BRC7 762 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 USP40Q9NVE5 1235 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 FANCLQ9NW38 375 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 KCNH3Q9ULD8 1083 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 GOLGA4Q13439 2230 aaKnown RBP9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 SH2B2O14492 632 aaPredicted RBP9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 TNS3Q68CZ2 1445 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 TMTC2Q8N394 836 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 RNF169Q8NCN4 708 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 TTLL11Q8NHH1 800 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 TBC1D7Q9P0N9 293 aa9.31□□□□□ -0.92
PTPDC1-204ENST00000620992 NEDD4P46934 1319 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 BTBD18B2RXH4 712 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 PLCG2P16885 1265 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 CRKLP46109 303 aaKnown RBP9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 AMPD3Q01432 767 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 NKX1-1Q15270 411 aaPredicted RBP9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 LONRF3Q496Y0 759 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 TBC1D10BQ4KMP7 808 aaPredicted RBP9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 PIK3AP1Q6ZUJ8 805 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 VPS36Q86VN1 386 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 SEPT12Q8IYM1 358 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 PCDHA5Q9Y5H7 936 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 COMMD10Q9Y6G5 202 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 LAMA4Q16363 1823 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 GOLGA6L10A6NI86 522 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 CTSWP56202 376 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 ZNF827Q17R98 1081 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 KRT79Q5XKE5 535 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 H7C1D1 291 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 FOXN1O15353 648 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 PARP1P09874 1014 aaKnown RBP9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 DESP17661 470 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 CNGA1P29973 690 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 NCAPHQ15003 741 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 TRMT44Q8IYL2 757 aaKnown RBP9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 KRT222Q8N1A0 295 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 MYO6Q9UM54 1294 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 RIPOR2Q9Y4F9 1068 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 TMEM232C9JQI7 657 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 PDE8BO95263 885 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 GNAQP50148 359 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 FAM47CQ5HY64 1035 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 GIGYF2Q6Y7W6 1299 aaKnown RBP9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 NLRP10Q86W26 655 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 NBPF3Q9H094 633 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 ZSWIM5Q9P217 1185 aa9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 DDX41Q9UJV9 622 aaKnown RBP9.3□□□□□ -0.92
PTPDC1-204ENST00000620992 MST1RQ04912 1400 aa9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 CCDC169A6NNP5 214 aa9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 POLR2DO15514 142 aaKnown RBP9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 TICAM2Q86XR7 235 aa9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 DIS3L2Q8IYB7 885 aaKnown RBP9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 LRRC47Q8N1G4 583 aaKnown RBP9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 ERMNQ8TAM6 284 aa9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 PIGBQ92521 554 aa9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 TMEM87BQ96K49 555 aa9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 BPIFA3Q9BQP9 254 aa9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 JADE2Q9NQC1 790 aa9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 TRPC5Q9UL62 973 aaPredicted RBP9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 TMEM110-MUSTN1A8MSY1 372 aa9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 UTP14CQ5TAP6 766 aaKnown RBP9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 FBXL16Q8N461 479 aa9.29□□□□□ -0.92
PTPDC1-204ENST00000620992 SPATA5Q8NB90 893 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms