RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 RABEP1Q15276 862 aa8.33□□□□□ -1.08
PSMB3-212ENST00000620309 TAF1CQ15572 869 aaPredicted RBP8.33□□□□□ -1.08
PSMB3-212ENST00000620309 ABCB5Q2M3G0 1257 aa8.33□□□□□ -1.08
PSMB3-212ENST00000620309 TATDN1Q6P1N9 297 aa8.33□□□□□ -1.08
PSMB3-212ENST00000620309 GADL1Q6ZQY3 521 aa8.33□□□□□ -1.08
PSMB3-212ENST00000620309 IFNL1Q8IU54 200 aa8.33□□□□□ -1.08
PSMB3-212ENST00000620309 CCDC17Q96LX7 622 aa8.33□□□□□ -1.08
PSMB3-212ENST00000620309 JAKMIP1Q96N16 626 aaKnown RBP8.33□□□□□ -1.08
PSMB3-212ENST00000620309 TTC14Q96N46 770 aa8.33□□□□□ -1.08
PSMB3-212ENST00000620309 PARK7Q99497 189 aaKnown RBP8.33□□□□□ -1.08
PSMB3-212ENST00000620309 UPF3BQ9BZI7 483 aaKnown RBP8.33□□□□□ -1.08
PSMB3-212ENST00000620309 CNNM2Q9H8M5 875 aa8.33□□□□□ -1.08
PSMB3-212ENST00000620309 MKNK2Q9HBH9 465 aa8.33□□□□□ -1.08
PSMB3-212ENST00000620309 ZFYVE28Q9HCC9 887 aa8.33□□□□□ -1.08
PSMB3-212ENST00000620309 ARHGEF10LQ9HCE6 1279 aa8.33□□□□□ -1.08
PSMB3-212ENST00000620309 ZSWIM6Q9HCJ5 1215 aa8.33□□□□□ -1.08
PSMB3-212ENST00000620309 ZHX2Q9Y6X8 837 aa8.33□□□□□ -1.08
PSMB3-212ENST00000620309 NID2Q14112 1375 aa8.33□□□□□ -1.08
PSMB3-212ENST00000620309 ZSWIM8A7E2V4 1837 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 IGKV6D-41A0A0C4DH26 115 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 TRIM75PA6NK02 468 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 PHF20L1A8MW92 1017 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 B4E1Z4 1266 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 C19orf81C9J6K1 198 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 IGF2BP3O00425 579 aaKnown RBP eCLIP8.32□□□□□ -1.08
PSMB3-212ENST00000620309 IRF6O14896 467 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 KDM4AO75164 1064 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 CPA1P15085 419 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 OSBPP22059 807 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 RPS6KB1P23443 525 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 RAB3GAP1Q15042 981 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 SHROOM1Q2M3G4 852 aaPredicted RBP8.32□□□□□ -1.08
PSMB3-212ENST00000620309 BLOC1S2Q6QNY1 142 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 MFSD6Q6ZSS7 791 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 TMEM179Q6ZVK1 233 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 CYB5R4Q7L1T6 521 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 RALYLQ86SE5 291 aaKnown RBP8.32□□□□□ -1.08
PSMB3-212ENST00000620309 ZNF444Q8N0Y2 327 aaPredicted RBP8.32□□□□□ -1.08
PSMB3-212ENST00000620309 PROCA1Q8NCQ7 364 aaPredicted RBP8.32□□□□□ -1.08
PSMB3-212ENST00000620309 ZNF280CQ8ND82 737 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 NCOA7Q8NI08 942 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 SMCR8Q8TEV9 937 aaPredicted RBP8.32□□□□□ -1.08
PSMB3-212ENST00000620309 ESR2Q92731 530 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 NEK1Q96PY6 1258 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.32□□□□□ -1.08
PSMB3-212ENST00000620309 AGXT2Q9BYV1 514 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 KRT23Q9C075 422 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 INCENPQ9NQS7 918 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 ZBTB21Q9ULJ3 1066 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 KCNH4Q9UQ05 1017 aa8.32□□□□□ -1.08
PSMB3-212ENST00000620309 TESPA1A2RU30 521 aaPredicted RBP8.31□□□□□ -1.08
PSMB3-212ENST00000620309 USP17L10C9JJH3 530 aa8.31□□□□□ -1.08
PSMB3-212ENST00000620309 SOX1O00570 391 aaPredicted RBP8.31□□□□□ -1.08
PSMB3-212ENST00000620309 SH2B2O14492 632 aaPredicted RBP8.31□□□□□ -1.08
PSMB3-212ENST00000620309 GDF11O95390 407 aa8.31□□□□□ -1.08
PSMB3-212ENST00000620309 CD2BP2O95400 341 aaKnown RBP8.31□□□□□ -1.08
PSMB3-212ENST00000620309 GH2P01242 217 aa8.31□□□□□ -1.08
PSMB3-212ENST00000620309 HMGB1P09429 215 aaKnown RBP8.31□□□□□ -1.08
PSMB3-212ENST00000620309 AKR1B1P15121 316 aa8.31□□□□□ -1.08
PSMB3-212ENST00000620309 PSMA5P28066 241 aa8.31□□□□□ -1.08
PSMB3-212ENST00000620309 NOVP48745 357 aa8.31□□□□□ -1.08
PSMB3-212ENST00000620309 EXOSC10Q01780 885 aaKnown RBP8.31□□□□□ -1.08
PSMB3-212ENST00000620309 TRDNQ13061 729 aa8.31□□□□□ -1.08
PSMB3-212ENST00000620309 RRP1BQ14684 758 aaKnown RBP8.31□□□□□ -1.08
PSMB3-212ENST00000620309 RUFY3Q7L099 469 aa8.31□□□□□ -1.08
PSMB3-212ENST00000620309 UBE2Q1Q7Z7E8 422 aa8.31□□□□□ -1.08
PSMB3-212ENST00000620309 ANKRD23Q86SG2 305 aa8.31□□□□□ -1.08
PSMB3-212ENST00000620309 STK11IPQ8N1F8 1099 aa8.31□□□□□ -1.08
PSMB3-212ENST00000620309 FBXL16Q8N461 479 aa8.31□□□□□ -1.08
PSMB3-212ENST00000620309 CD99L2Q8TCZ2 262 aa8.31□□□□□ -1.08
PSMB3-212ENST00000620309 GTF3C2Q8WUA4 911 aaPredicted RBP8.31□□□□□ -1.08
PSMB3-212ENST00000620309 ERO1AQ96HE7 468 aa8.31□□□□□ -1.08
PSMB3-212ENST00000620309 TCEANC2Q96MN5 208 aa8.31□□□□□ -1.08
PSMB3-212ENST00000620309 MTA3Q9BTC8 594 aa8.31□□□□□ -1.08
PSMB3-212ENST00000620309 TOMM22Q9NS69 142 aa8.31□□□□□ -1.08
PSMB3-212ENST00000620309 SLC45A1Q9Y2W3 748 aa8.31□□□□□ -1.08
PSMB3-212ENST00000620309 PLXNB2O15031 1838 aa8.31□□□□□ -1.08
PSMB3-212ENST00000620309 ALPK3Q96L96 1907 aa8.31□□□□□ -1.08
PSMB3-212ENST00000620309 TNKSO95271 1327 aa8.3□□□□□ -1.08
PSMB3-212ENST00000620309 A0A0G2JLL6 359 aaPredicted RBP8.3□□□□□ -1.08
PSMB3-212ENST00000620309 A0A1W2PPC1 479 aa8.3□□□□□ -1.08
PSMB3-212ENST00000620309 PDHXO00330 501 aa8.3□□□□□ -1.08
PSMB3-212ENST00000620309 PRC1O43663 620 aa8.3□□□□□ -1.08
PSMB3-212ENST00000620309 TSPY3P0CV98 308 aa8.3□□□□□ -1.08
PSMB3-212ENST00000620309 TSPY8P0CW00 308 aa8.3□□□□□ -1.08
PSMB3-212ENST00000620309 MCM5P33992 734 aa8.3□□□□□ -1.08
PSMB3-212ENST00000620309 BACE1P56817 501 aa8.3□□□□□ -1.08
PSMB3-212ENST00000620309 IRX3P78415 501 aaPredicted RBP8.3□□□□□ -1.08
PSMB3-212ENST00000620309 JAG1P78504 1218 aa8.3□□□□□ -1.08
PSMB3-212ENST00000620309 ICA1Q05084 483 aa8.3□□□□□ -1.08
PSMB3-212ENST00000620309 SPP2Q13103 211 aa8.3□□□□□ -1.08
PSMB3-212ENST00000620309 MTMR2Q13614 643 aa8.3□□□□□ -1.08
PSMB3-212ENST00000620309 TOB2Q14106 344 aaPredicted RBP8.3□□□□□ -1.08
PSMB3-212ENST00000620309 SEC23AQ15436 765 aa8.3□□□□□ -1.08
PSMB3-212ENST00000620309 RRP12Q5JTH9 1297 aaKnown RBP8.3□□□□□ -1.08
PSMB3-212ENST00000620309 RCSD1Q6JBY9 416 aa8.3□□□□□ -1.08
PSMB3-212ENST00000620309 USP17L2Q6R6M4 530 aa8.3□□□□□ -1.08
PSMB3-212ENST00000620309 DHX32Q7L7V1 743 aaKnown RBP8.3□□□□□ -1.08
PSMB3-212ENST00000620309 PRRT2Q7Z6L0 340 aaPredicted RBP8.3□□□□□ -1.08
PSMB3-212ENST00000620309 CLEC10AQ8IUN9 316 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms