RNA–Protein interactions for RNA: ENST00000619158.1

CDH11-219, Transcript of cadherin 11, humanhuman

Gene CDH11, Length 3,639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-219ENST00000619158 SLFNL1Q499Z3 407 aa6.32□□□□□ -1.4
CDH11-219ENST00000619158 TEX11Q8IYF3 940 aa6.32□□□□□ -1.4
CDH11-219ENST00000619158 BRI3BPQ8WY22 251 aa6.32□□□□□ -1.4
CDH11-219ENST00000619158 USP6NLQ92738 828 aa6.32□□□□□ -1.4
CDH11-219ENST00000619158 CLMNQ96JQ2 1002 aa6.32□□□□□ -1.4
CDH11-219ENST00000619158 ZIC5Q96T25 663 aa6.32□□□□□ -1.4
CDH11-219ENST00000619158 LSG1Q9H089 658 aaKnown RBP6.32□□□□□ -1.4
CDH11-219ENST00000619158 ARID2Q68CP9 1835 aa6.32□□□□□ -1.4
CDH11-219ENST00000619158 IGF2BP3O00425 579 aaKnown RBP eCLIP6.31□□□□□ -1.4
CDH11-219ENST00000619158 SGSM2O43147 1006 aa6.31□□□□□ -1.4
CDH11-219ENST00000619158 GPAA1O43292 621 aa6.31□□□□□ -1.4
CDH11-219ENST00000619158 FECHP22830 423 aa6.31□□□□□ -1.4
CDH11-219ENST00000619158 CRNKL1Q9BZJ0 848 aaKnown RBP6.31□□□□□ -1.4
CDH11-219ENST00000619158 AATFQ9NY61 560 aaKnown RBP eCLIP6.31□□□□□ -1.4
CDH11-219ENST00000619158 HTTP42858 3142 aa6.31□□□□□ -1.4
CDH11-219ENST00000619158 TTLL13PA6NNM8 815 aa6.31□□□□□ -1.4
CDH11-219ENST00000619158 MBD4O95243 580 aa6.31□□□□□ -1.4
CDH11-219ENST00000619158 MCMDC2Q4G0Z9 681 aa6.31□□□□□ -1.4
CDH11-219ENST00000619158 MOB2Q70IA6 237 aa6.31□□□□□ -1.4
CDH11-219ENST00000619158 NBPF11Q86T75 865 aa6.31□□□□□ -1.4
CDH11-219ENST00000619158 MICAL1Q8TDZ2 1067 aa6.31□□□□□ -1.4
CDH11-219ENST00000619158 RBM27Q9P2N5 1060 aaKnown RBP6.31□□□□□ -1.4
CDH11-219ENST00000619158 ZBTB21Q9ULJ3 1066 aa6.31□□□□□ -1.4
CDH11-219ENST00000619158 TCP10L2B9ZVM9 353 aa6.31□□□□□ -1.4
CDH11-219ENST00000619158 ATP2A1O14983 1001 aa6.31□□□□□ -1.4
CDH11-219ENST00000619158 CACNB3P54284 484 aa6.31□□□□□ -1.4
CDH11-219ENST00000619158 NMIQ13287 307 aaPredicted RBP6.31□□□□□ -1.4
CDH11-219ENST00000619158 ANKRD45Q5TZF3 282 aa6.31□□□□□ -1.4
CDH11-219ENST00000619158 C17orf99Q6UX52 265 aa6.31□□□□□ -1.4
CDH11-219ENST00000619158 MAP4K1Q92918 833 aa6.31□□□□□ -1.4
CDH11-219ENST00000619158 AGXT2Q9BYV1 514 aa6.31□□□□□ -1.4
CDH11-219ENST00000619158 RNF186Q9NXI6 227 aa6.31□□□□□ -1.4
CDH11-219ENST00000619158 PRKAB2O43741 272 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 HSPD1P10809 573 aaKnown RBP6.3□□□□□ -1.4
CDH11-219ENST00000619158 GTF2A2P52657 109 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 TSHZ3Q63HK5 1081 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 IFNL3Q8IZI9 196 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 YTHDC1Q96MU7 727 aaKnown RBP6.3□□□□□ -1.4
CDH11-219ENST00000619158 ARMT1Q9H993 441 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 PPP4R2Q9NY27 417 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 LRP2BPQ9P2M1 347 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 SMCHD1A6NHR9 2005 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 F8W031 263 aaPredicted RBP6.3□□□□□ -1.4
CDH11-219ENST00000619158 GALR2O43603 387 aaPredicted RBP6.3□□□□□ -1.4
CDH11-219ENST00000619158 NKX3-2P78367 333 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 MAP2K1Q02750 393 aaPredicted RBP6.3□□□□□ -1.4
CDH11-219ENST00000619158 LRRFIP1Q32MZ4 808 aaKnown RBP6.3□□□□□ -1.4
CDH11-219ENST00000619158 OPTNQ96CV9 577 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 UBA5Q9GZZ9 404 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 GPHNQ9NQX3 736 aaPredicted RBP6.3□□□□□ -1.4
CDH11-219ENST00000619158 RAI14Q9P0K7 980 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 NYAP2Q9P242 653 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 AGTPBP1Q9UPW5 1226 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 SMIM22K7EJ46 135 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 INPP5BP32019 993 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 SREBF2Q12772 1141 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 KIAA1755Q5JYT7 1200 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 BTNL9Q6UXG8 535 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 NEDD1Q8NHV4 660 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 MTMR8Q96EF0 704 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 CCDC17Q96LX7 622 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 FAM227BQ96M60 508 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 ALDH8A1Q9H2A2 487 aaPredicted RBP6.3□□□□□ -1.4
CDH11-219ENST00000619158 TMX2Q9Y320 296 aa6.3□□□□□ -1.4
CDH11-219ENST00000619158 AOC2O75106 756 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 CAPN2P17655 700 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 EVCP57679 992 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 KIF23Q02241 960 aaPredicted RBP6.29□□□□□ -1.4
CDH11-219ENST00000619158 SEC23AQ15436 765 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 RCSD1Q6JBY9 416 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 CYP4F22Q6NT55 531 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 GTF3C2Q8WUA4 911 aaPredicted RBP6.29□□□□□ -1.4
CDH11-219ENST00000619158 TGFBRAP1Q8WUH2 860 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 MAP3K14Q99558 947 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 LNPKQ9C0E8 428 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 TMOD2Q9NZR1 351 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 SERPINB13Q9UIV8 391 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 FRMPD4Q14CM0 1322 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 C19orf81C9J6K1 198 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 MAP3K7O43318 606 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 ALDH1A1P00352 501 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 CYP2D6P10635 497 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 HUNKP57058 714 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 FOXD4Q12950 439 aaPredicted RBP6.29□□□□□ -1.4
CDH11-219ENST00000619158 NECTIN1Q15223 517 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 SHROOM1Q2M3G4 852 aaPredicted RBP6.29□□□□□ -1.4
CDH11-219ENST00000619158 VPS53Q5VIR6 699 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 GMCL1Q96IK5 515 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 PALD1Q9ULE6 856 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 COL4A6Q14031 1691 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 UBE2Q2LH0YL09 131 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 FOXN1O15353 648 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 CTGFP29279 349 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 NF2P35240 595 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 CDK8P49336 464 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 TMEM179Q6ZVK1 233 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 TTC6Q86TZ1 520 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 TBC1D10CQ8IV04 446 aa6.29□□□□□ -1.4
CDH11-219ENST00000619158 SEC62Q99442 399 aaKnown RBP6.29□□□□□ -1.4
CDH11-219ENST00000619158 IL17RBQ9NRM6 502 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms