RNA–Protein interactions for RNA: ENST00000619151.4

BRF1-221, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5 BASIC

Gene BRF1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-221ENST00000619151 TCP10L2B9ZVM9 353 aa32.23■■■□□ 2.75
BRF1-221ENST00000619151 FIBPO43427 364 aa32.23■■■□□ 2.75
BRF1-221ENST00000619151 XBP1P17861 261 aa32.23■■■□□ 2.75
BRF1-221ENST00000619151 BRAPQ7Z569 592 aa32.23■■■□□ 2.75
BRF1-221ENST00000619151 USP48Q86UV5 1035 aa32.23■■■□□ 2.75
BRF1-221ENST00000619151 MTMR4Q9NYA4 1195 aa32.23■■■□□ 2.75
BRF1-221ENST00000619151 CFAP45Q9UL16 551 aa32.23■■■□□ 2.75
BRF1-221ENST00000619151 PLEKHA8P1O95397 391 aa32.22■■■□□ 2.75
BRF1-221ENST00000619151 KRT40Q6A162 431 aa32.22■■■□□ 2.75
BRF1-221ENST00000619151 FAM83AQ86UY5 434 aa32.22■■■□□ 2.75
BRF1-221ENST00000619151 CCDC82Q8N4S0 544 aa32.22■■■□□ 2.75
BRF1-221ENST00000619151 ZNF396Q96N95 335 aaPredicted RBP32.22■■■□□ 2.75
BRF1-221ENST00000619151 LZTS2Q9BRK4 669 aa32.22■■■□□ 2.75
BRF1-221ENST00000619151 FUT2Q10981 343 aa32.21■■■□□ 2.75
BRF1-221ENST00000619151 CMTR1Q8N1G2 835 aaKnown RBP32.21■■■□□ 2.75
BRF1-221ENST00000619151 ZC3H15Q8WU90 426 aaKnown RBP32.21■■■□□ 2.75
BRF1-221ENST00000619151 CSRNP1Q96S65 589 aa32.21■■■□□ 2.75
BRF1-221ENST00000619151 GNL3Q9BVP2 549 aaKnown RBP eCLIP32.21■■■□□ 2.75
BRF1-221ENST00000619151 VEZTQ9HBM0 779 aa32.21■■■□□ 2.75
BRF1-221ENST00000619151 GDPD2Q9HCC8 539 aa32.21■■■□□ 2.75
BRF1-221ENST00000619151 PGAP2Q9UHJ9 254 aa32.21■■■□□ 2.75
BRF1-221ENST00000619151 HERC5Q9UII4 1024 aaKnown RBP32.21■■■□□ 2.75
BRF1-221ENST00000619151 MYH6P13533 1939 aa32.21■■■□□ 2.75
BRF1-221ENST00000619151 MPHOSPH10O00566 681 aaKnown RBP32.21■■■□□ 2.75
BRF1-221ENST00000619151 TTLL1O95922 423 aa32.21■■■□□ 2.75
BRF1-221ENST00000619151 CERKLQ49MI3 558 aaPredicted RBP32.21■■■□□ 2.75
BRF1-221ENST00000619151 OTUD7BQ6GQQ9 843 aa32.21■■■□□ 2.75
BRF1-221ENST00000619151 TATDN1Q6P1N9 297 aa32.21■■■□□ 2.75
BRF1-221ENST00000619151 AIFM3Q96NN9 605 aa32.21■■■□□ 2.75
BRF1-221ENST00000619151 DNAJC18Q9H819 358 aa32.21■■■□□ 2.75
BRF1-221ENST00000619151 NMRK2Q9NPI5 230 aa32.21■■■□□ 2.75
BRF1-221ENST00000619151 CNTNAP5Q8WYK1 1306 aa32.2■■■□□ 2.75
BRF1-221ENST00000619151 GREB1LQ9C091 1923 aaPredicted RBP32.2■■■□□ 2.75
BRF1-221ENST00000619151 TNNI2P48788 182 aa32.2■■■□□ 2.74
BRF1-221ENST00000619151 SAFBQ15424 915 aaKnown RBP eCLIP32.2■■■□□ 2.74
BRF1-221ENST00000619151 MYH15Q9Y2K3 1946 aa32.2■■■□□ 2.74
BRF1-221ENST00000619151 ELP1O95163 1332 aa32.19■■■□□ 2.74
BRF1-221ENST00000619151 GNL2Q13823 731 aaKnown RBP32.19■■■□□ 2.74
BRF1-221ENST00000619151 ASTN2O75129 1339 aaPredicted RBP32.18■■■□□ 2.74
BRF1-221ENST00000619151 PITPNM2Q9BZ72 1349 aa32.18■■■□□ 2.74
BRF1-221ENST00000619151 KIF23Q02241 960 aaPredicted RBP32.18■■■□□ 2.74
BRF1-221ENST00000619151 FAM173BQ6P4H8 233 aa32.18■■■□□ 2.74
BRF1-221ENST00000619151 SRBD1Q8N5C6 995 aaKnown RBP32.18■■■□□ 2.74
BRF1-221ENST00000619151 ZNF526Q8TF50 670 aaPredicted RBP32.18■■■□□ 2.74
BRF1-221ENST00000619151 MAD2L2Q9UI95 211 aa32.17■■■□□ 2.74
BRF1-221ENST00000619151 PARP1P09874 1014 aaKnown RBP32.16■■■□□ 2.74
BRF1-221ENST00000619151 GUCY1A2P33402 732 aa32.16■■■□□ 2.74
BRF1-221ENST00000619151 UBE2HP62256 183 aa32.16■■■□□ 2.74
BRF1-221ENST00000619151 TNFAIP1Q13829 316 aa32.16■■■□□ 2.74
BRF1-221ENST00000619151 ANGEL2Q5VTE6 544 aaKnown RBP32.16■■■□□ 2.74
BRF1-221ENST00000619151 SPATA32Q96LK8 384 aa32.16■■■□□ 2.74
BRF1-221ENST00000619151 V9GY48 417 aaPredicted RBP32.16■■■□□ 2.74
BRF1-221ENST00000619151 CNTNAP1P78357 1384 aa32.16■■■□□ 2.74
BRF1-221ENST00000619151 TMEM179Q6ZVK1 233 aa32.16■■■□□ 2.74
BRF1-221ENST00000619151 GGA3Q9NZ52 723 aa32.16■■■□□ 2.74
BRF1-221ENST00000619151 PALM3A6NDB9 673 aaPredicted RBP32.15■■■□□ 2.74
BRF1-221ENST00000619151 APOBEC3FQ8IUX4 373 aaKnown RBP32.15■■■□□ 2.74
BRF1-221ENST00000619151 KANSL2Q9H9L4 492 aa32.15■■■□□ 2.74
BRF1-221ENST00000619151 XPO5Q9HAV4 1204 aaKnown RBP eCLIP32.15■■■□□ 2.743e-6■□□□□ 9.8
BRF1-221ENST00000619151 GJB4Q9NTQ9 266 aa32.15■■■□□ 2.74
BRF1-221ENST00000619151 MMP1P03956 469 aa32.14■■■□□ 2.74
BRF1-221ENST00000619151 EAPPQ56P03 285 aaPredicted RBP32.14■■■□□ 2.74
BRF1-221ENST00000619151 GPBP1L1Q9HC44 474 aaPredicted RBP32.14■■■□□ 2.74
BRF1-221ENST00000619151 CLIP2Q9UDT6 1046 aa32.14■■■□□ 2.74
BRF1-221ENST00000619151 FAM196BA6NMK8 535 aa32.13■■■□□ 2.73
BRF1-221ENST00000619151 SMARCA1P28370 1054 aa32.13■■■□□ 2.73
BRF1-221ENST00000619151 PKN1Q16512 942 aa32.13■■■□□ 2.73
BRF1-221ENST00000619151 ABCB5Q2M3G0 1257 aa32.13■■■□□ 2.73
BRF1-221ENST00000619151 CABP5Q9NP86 173 aa32.13■■■□□ 2.73
BRF1-221ENST00000619151 UBE2Q2LH0YL09 131 aa32.12■■■□□ 2.73
BRF1-221ENST00000619151 YY1P25490 414 aa32.12■■■□□ 2.73
BRF1-221ENST00000619151 ASPRV1Q53RT3 343 aa32.12■■■□□ 2.73
BRF1-221ENST00000619151 GPT2Q8TD30 523 aa32.12■■■□□ 2.73
BRF1-221ENST00000619151 TFIP11Q9UBB9 837 aaKnown RBP32.12■■■□□ 2.73
BRF1-221ENST00000619151 MTMR7Q9Y216 660 aa32.12■■■□□ 2.73
BRF1-221ENST00000619151 STAG2Q8N3U4 1231 aa32.11■■■□□ 2.73
BRF1-221ENST00000619151 LEO1Q8WVC0 666 aaPredicted RBP32.11■■■□□ 2.73
BRF1-221ENST00000619151 DCPSQ96C86 337 aaKnown RBP32.11■■■□□ 2.73
BRF1-221ENST00000619151 SPZ1Q9BXG8 430 aa32.11■■■□□ 2.73
BRF1-221ENST00000619151 NYAP2Q9P242 653 aa32.11■■■□□ 2.73
BRF1-221ENST00000619151 TBC1D12O60347 775 aa32.1■■■□□ 2.73
BRF1-221ENST00000619151 SCG2P13521 617 aa32.1■■■□□ 2.73
BRF1-221ENST00000619151 U2AF2P26368 475 aaKnown RBP eCLIP32.1■■■□□ 2.731e-6■■■□□ 16.3
BRF1-221ENST00000619151 GSE1Q14687 1217 aa32.1■■■□□ 2.73
BRF1-221ENST00000619151 PFKFB3Q16875 520 aaPredicted RBP32.1■■■□□ 2.73
BRF1-221ENST00000619151 MYSM1Q5VVJ2 828 aa32.1■■■□□ 2.73
BRF1-221ENST00000619151 LRRC47Q8N1G4 583 aaKnown RBP32.1■■■□□ 2.73
BRF1-221ENST00000619151 FOXP1Q9H334 677 aaPredicted RBP32.1■■■□□ 2.73
BRF1-221ENST00000619151 BRMS1Q9HCU9 246 aa32.1■■■□□ 2.73
BRF1-221ENST00000619151 KIF28PB7ZC32 967 aa32.1■■■□□ 2.73
BRF1-221ENST00000619151 KLRF2D3W0D1 207 aa32.1■■■□□ 2.73
BRF1-221ENST00000619151 POTEIP0CG38 1075 aa32.1■■■□□ 2.73
BRF1-221ENST00000619151 POTEJP0CG39 1038 aa32.1■■■□□ 2.73
BRF1-221ENST00000619151 PDHBP11177 359 aa32.1■■■□□ 2.73
BRF1-221ENST00000619151 LDHDQ86WU2 507 aa32.1■■■□□ 2.73
BRF1-221ENST00000619151 SYAP1Q96A49 352 aaPredicted RBP32.1■■■□□ 2.73
BRF1-221ENST00000619151 POLR2AP24928 1970 aaKnown RBP32.09■■■□□ 2.73
BRF1-221ENST00000619151 GADD45BO75293 160 aaPredicted RBP32.09■■■□□ 2.73
BRF1-221ENST00000619151 RASA3Q14644 834 aa32.09■■■□□ 2.73
BRF1-221ENST00000619151 DIS3L2Q8IYB7 885 aaKnown RBP32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms