RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 SF3A1Q15459 793 aaKnown RBP29.17■■■□□ 2.26
VEGFC-202ENST00000618562 MTFR1LQ9H019 292 aa29.17■■■□□ 2.26
VEGFC-202ENST00000618562 OSBPL5Q9H0X9 879 aaPredicted RBP29.17■■■□□ 2.26
VEGFC-202ENST00000618562 MYH8P13535 1937 aa29.16■■■□□ 2.26
VEGFC-202ENST00000618562 GOLGA6L19H0YKK7 550 aa29.16■■■□□ 2.26
VEGFC-202ENST00000618562 SPTLC2O15270 562 aa29.16■■■□□ 2.26
VEGFC-202ENST00000618562 PKN1Q16512 942 aa29.16■■■□□ 2.26
VEGFC-202ENST00000618562 DNTTIP2Q5QJE6 756 aaKnown RBP29.16■■■□□ 2.26
VEGFC-202ENST00000618562 PNMA1Q8ND90 353 aa29.16■■■□□ 2.26
VEGFC-202ENST00000618562 NEDD1Q8NHV4 660 aa29.16■■■□□ 2.26
VEGFC-202ENST00000618562 PRPF3O43395 683 aaKnown RBP29.16■■■□□ 2.26
VEGFC-202ENST00000618562 U2AF2P26368 475 aaKnown RBP eCLIP29.16■■■□□ 2.26
VEGFC-202ENST00000618562 C11orf57Q6ZUT1 292 aaPredicted RBP29.16■■■□□ 2.26
VEGFC-202ENST00000618562 SERPINA10Q9UK55 444 aa29.16■■■□□ 2.26
VEGFC-202ENST00000618562 MMP1P03956 469 aa29.15■■■□□ 2.26
VEGFC-202ENST00000618562 TGFB2P61812 414 aa29.15■■■□□ 2.26
VEGFC-202ENST00000618562 SRBD1Q8N5C6 995 aaKnown RBP29.15■■■□□ 2.26
VEGFC-202ENST00000618562 ZNF277Q9NRM2 450 aaPredicted RBP29.15■■■□□ 2.26
VEGFC-202ENST00000618562 CNTNAP5Q8WYK1 1306 aa29.15■■■□□ 2.26
VEGFC-202ENST00000618562 PRIMPOLQ96LW4 560 aa29.14■■■□□ 2.26
VEGFC-202ENST00000618562 KCNJ14Q9UNX9 436 aa29.14■■■□□ 2.26
VEGFC-202ENST00000618562 BRCA1P38398 1863 aaKnown RBP29.14■■■□□ 2.26
VEGFC-202ENST00000618562 POLD1P28340 1107 aa29.14■■■□□ 2.25
VEGFC-202ENST00000618562 RBM5P52756 815 aaKnown RBP eCLIP29.14■■■□□ 2.25
VEGFC-202ENST00000618562 AKAP17AQ02040 695 aaKnown RBP29.14■■■□□ 2.25
VEGFC-202ENST00000618562 ANO1Q5XXA6 986 aa29.14■■■□□ 2.25
VEGFC-202ENST00000618562 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.14■■■□□ 2.25
VEGFC-202ENST00000618562 V9GY48 417 aaPredicted RBP29.14■■■□□ 2.25
VEGFC-202ENST00000618562 BAZ2BQ9UIF8 2168 aaKnown RBP29.13■■■□□ 2.25
VEGFC-202ENST00000618562 SHISA4Q96DD7 197 aa29.13■■■□□ 2.25
VEGFC-202ENST00000618562 MAP3K14Q99558 947 aa29.13■■■□□ 2.25
VEGFC-202ENST00000618562 TMEM47Q9BQJ4 181 aa29.13■■■□□ 2.25
VEGFC-202ENST00000618562 PIM2Q9P1W9 311 aa29.13■■■□□ 2.25
VEGFC-202ENST00000618562 PYCARDQ9ULZ3 195 aa29.13■■■□□ 2.25
VEGFC-202ENST00000618562 STX8Q9UNK0 236 aa29.13■■■□□ 2.25
VEGFC-202ENST00000618562 hCG_1642624A0A1W2PR95 340 aa29.13■■■□□ 2.25
VEGFC-202ENST00000618562 DYNC1I1O14576 645 aa29.13■■■□□ 2.25
VEGFC-202ENST00000618562 PTGS1P23219 599 aa29.13■■■□□ 2.25
VEGFC-202ENST00000618562 LARGE2Q8N3Y3 721 aa29.13■■■□□ 2.25
VEGFC-202ENST00000618562 CACNB3P54284 484 aa29.12■■■□□ 2.25
VEGFC-202ENST00000618562 GNL2Q13823 731 aaKnown RBP29.12■■■□□ 2.25
VEGFC-202ENST00000618562 ZFPM1Q8IX07 1006 aa29.12■■■□□ 2.25
VEGFC-202ENST00000618562 DRC7Q8IY82 874 aa29.12■■■□□ 2.25
VEGFC-202ENST00000618562 SERPINB13Q9UIV8 391 aa29.12■■■□□ 2.25
VEGFC-202ENST00000618562 A0A1B0GVL5 298 aa29.11■■■□□ 2.25
VEGFC-202ENST00000618562 KIF5BP33176 963 aa29.11■■■□□ 2.25
VEGFC-202ENST00000618562 NDUFA8P51970 172 aa29.11■■■□□ 2.25
VEGFC-202ENST00000618562 CEP57L1Q8IYX8 460 aa29.11■■■□□ 2.25
VEGFC-202ENST00000618562 C17orf53Q8N3J3 647 aaPredicted RBP29.11■■■□□ 2.25
VEGFC-202ENST00000618562 NAT10Q9H0A0 1025 aaKnown RBP29.11■■■□□ 2.25
VEGFC-202ENST00000618562 PLIN4Q96Q06 1357 aa29.11■■■□□ 2.25
VEGFC-202ENST00000618562 HSP90AA2PQ14568 343 aaPredicted RBP29.11■■■□□ 2.25
VEGFC-202ENST00000618562 R3HDM1Q15032 1099 aaKnown RBP29.11■■■□□ 2.25
VEGFC-202ENST00000618562 SDF4Q9BRK5 362 aa29.11■■■□□ 2.25
VEGFC-202ENST00000618562 SIPA1L1O43166 1804 aa29.11■■■□□ 2.25
VEGFC-202ENST00000618562 BTBD18B2RXH4 712 aa29.1■■■□□ 2.25
VEGFC-202ENST00000618562 GRM4Q14833 912 aa29.1■■■□□ 2.25
VEGFC-202ENST00000618562 CCDC186Q7Z3E2 898 aa29.1■■■□□ 2.25
VEGFC-202ENST00000618562 DIS3L2Q8IYB7 885 aaKnown RBP29.1■■■□□ 2.25
VEGFC-202ENST00000618562 CEP95Q96GE4 821 aa29.1■■■□□ 2.25
VEGFC-202ENST00000618562 MRFAP1L1Q96HT8 127 aa29.1■■■□□ 2.25
VEGFC-202ENST00000618562 IDI2Q9BXS1 227 aa29.1■■■□□ 2.25
VEGFC-202ENST00000618562 NOVP48745 357 aa29.09■■■□□ 2.25
VEGFC-202ENST00000618562 SOGA3Q5TF21 947 aa29.09■■■□□ 2.25
VEGFC-202ENST00000618562 FAM198AQ9UFP1 575 aa29.09■■■□□ 2.25
VEGFC-202ENST00000618562 BECN2A8MW95 431 aa29.09■■■□□ 2.25
VEGFC-202ENST00000618562 CMA1P23946 247 aa29.09■■■□□ 2.25
VEGFC-202ENST00000618562 SLC39A14Q15043 492 aa29.09■■■□□ 2.25
VEGFC-202ENST00000618562 SAFBQ15424 915 aaKnown RBP eCLIP29.09■■■□□ 2.25
VEGFC-202ENST00000618562 STAG2Q8N3U4 1231 aa29.09■■■□□ 2.25
VEGFC-202ENST00000618562 VPS54Q9P1Q0 977 aa29.09■■■□□ 2.25
VEGFC-202ENST00000618562 CLIP2Q9UDT6 1046 aa29.09■■■□□ 2.25
VEGFC-202ENST00000618562 RAD17O75943 681 aa29.08■■■□□ 2.25
VEGFC-202ENST00000618562 AXDND1Q5T1B0 1012 aaPredicted RBP29.08■■■□□ 2.25
VEGFC-202ENST00000618562 NOSTRINQ8IVI9 506 aa29.08■■■□□ 2.25
VEGFC-202ENST00000618562 MYRIPQ8NFW9 859 aa29.08■■■□□ 2.25
VEGFC-202ENST00000618562 VPS33BQ9H267 617 aa29.08■■■□□ 2.25
VEGFC-202ENST00000618562 SWAP70Q9UH65 585 aa29.08■■■□□ 2.25
VEGFC-202ENST00000618562 MAD2L2Q9UI95 211 aa29.08■■■□□ 2.25
VEGFC-202ENST00000618562 RSBN1LQ6PCB5 846 aaPredicted RBP29.08■■■□□ 2.25
VEGFC-202ENST00000618562 DHX40Q8IX18 779 aaKnown RBP29.08■■■□□ 2.25
VEGFC-202ENST00000618562 FOXP1Q9H334 677 aaPredicted RBP29.08■■■□□ 2.25
VEGFC-202ENST00000618562 KIAA1468Q9P260 1216 aa29.08■■■□□ 2.25
VEGFC-202ENST00000618562 PSMD14O00487 310 aa29.07■■■□□ 2.24
VEGFC-202ENST00000618562 HLA-DOAP06340 250 aa29.07■■■□□ 2.24
VEGFC-202ENST00000618562 AKR1B1P15121 316 aa29.07■■■□□ 2.24
VEGFC-202ENST00000618562 SHMT1P34896 483 aa29.07■■■□□ 2.24
VEGFC-202ENST00000618562 TCP10Q12799 353 aa29.07■■■□□ 2.24
VEGFC-202ENST00000618562 CFAP100Q494V2 611 aa29.07■■■□□ 2.24
VEGFC-202ENST00000618562 FER1L6Q2WGJ9 1857 aa29.07■■■□□ 2.24
VEGFC-202ENST00000618562 MYO3BQ8WXR4 1341 aa29.07■■■□□ 2.24
VEGFC-202ENST00000618562 VIL1P09327 827 aaKnown RBP29.06■■■□□ 2.24
VEGFC-202ENST00000618562 DALRD3Q5D0E6 543 aaKnown RBP29.06■■■□□ 2.24
VEGFC-202ENST00000618562 PHF20Q9BVI0 1012 aa29.06■■■□□ 2.24
VEGFC-202ENST00000618562 EHD4Q9H223 541 aa29.06■■■□□ 2.24
VEGFC-202ENST00000618562 XBP1P17861 261 aa29.06■■■□□ 2.24
VEGFC-202ENST00000618562 JMYQ8N9B5 988 aa29.06■■■□□ 2.24
VEGFC-202ENST00000618562 OXER1Q8TDS5 423 aa29.06■■■□□ 2.24
VEGFC-202ENST00000618562 GMLQ99445 158 aa29.06■■■□□ 2.24
VEGFC-202ENST00000618562 SGIP1Q9BQI5 828 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms