RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 MRVI1Q9Y6F6 885 aa13□□□□□ -0.33
CPEB1-216ENST00000618449 CNTNAP5Q8WYK1 1306 aa12.99□□□□□ -0.33
CPEB1-216ENST00000618449 NFKBIEO00221 500 aa12.99□□□□□ -0.33
CPEB1-216ENST00000618449 ZNF500O60304 480 aaPredicted RBP12.99□□□□□ -0.33
CPEB1-216ENST00000618449 MMP1P03956 469 aa12.99□□□□□ -0.33
CPEB1-216ENST00000618449 AKR1B1P15121 316 aa12.99□□□□□ -0.33
CPEB1-216ENST00000618449 KIF5BP33176 963 aa12.99□□□□□ -0.33
CPEB1-216ENST00000618449 SHMT1P34896 483 aa12.99□□□□□ -0.33
CPEB1-216ENST00000618449 SH3BP5LQ7L8J4 393 aa12.99□□□□□ -0.33
CPEB1-216ENST00000618449 FAM200AQ8TCP9 573 aa12.99□□□□□ -0.33
CPEB1-216ENST00000618449 MAP3K14Q99558 947 aa12.99□□□□□ -0.33
CPEB1-216ENST00000618449 NPM3O75607 178 aaKnown RBP12.99□□□□□ -0.33
CPEB1-216ENST00000618449 U2AF2P26368 475 aaKnown RBP eCLIP12.99□□□□□ -0.33
CPEB1-216ENST00000618449 NOVP48745 357 aa12.99□□□□□ -0.33
CPEB1-216ENST00000618449 GNL2Q13823 731 aaKnown RBP12.99□□□□□ -0.33
CPEB1-216ENST00000618449 STAG2Q8N3U4 1231 aa12.99□□□□□ -0.33
CPEB1-216ENST00000618449 SHISA4Q96DD7 197 aa12.99□□□□□ -0.33
CPEB1-216ENST00000618449 EHD4Q9H223 541 aa12.99□□□□□ -0.33
CPEB1-216ENST00000618449 DHX36Q9H2U1 1008 aaKnown RBP12.99□□□□□ -0.33
CPEB1-216ENST00000618449 MTMR7Q9Y216 660 aa12.99□□□□□ -0.33
CPEB1-216ENST00000618449 FER1L6Q2WGJ9 1857 aa12.99□□□□□ -0.33
CPEB1-216ENST00000618449 PLIN4Q96Q06 1357 aa12.98□□□□□ -0.33
CPEB1-216ENST00000618449 CXCL9Q07325 125 aa12.98□□□□□ -0.33
CPEB1-216ENST00000618449 GRM4Q14833 912 aa12.98□□□□□ -0.33
CPEB1-216ENST00000618449 ZSCAN29Q8IWY8 852 aaPredicted RBP12.98□□□□□ -0.33
CPEB1-216ENST00000618449 DNAJC18Q9H819 358 aa12.98□□□□□ -0.33
CPEB1-216ENST00000618449 RTEL1Q9NZ71 1219 aa12.98□□□□□ -0.33
CPEB1-216ENST00000618449 MAD2L2Q9UI95 211 aa12.98□□□□□ -0.33
CPEB1-216ENST00000618449 CLIC4Q9Y696 253 aa12.98□□□□□ -0.33
CPEB1-216ENST00000618449 MYH6P13533 1939 aa12.98□□□□□ -0.33
CPEB1-216ENST00000618449 SPDYE2BA6NHP3 402 aa12.98□□□□□ -0.33
CPEB1-216ENST00000618449 BTBD18B2RXH4 712 aa12.98□□□□□ -0.33
CPEB1-216ENST00000618449 SPDYE6P0CI01 402 aa12.98□□□□□ -0.33
CPEB1-216ENST00000618449 RASGRP2Q7LDG7 609 aa12.98□□□□□ -0.33
CPEB1-216ENST00000618449 DIS3L2Q8IYB7 885 aaKnown RBP12.98□□□□□ -0.33
CPEB1-216ENST00000618449 OGFOD1Q8N543 542 aa12.98□□□□□ -0.33
CPEB1-216ENST00000618449 MTMR4Q9NYA4 1195 aa12.98□□□□□ -0.33
CPEB1-216ENST00000618449 VPS54Q9P1Q0 977 aa12.98□□□□□ -0.33
CPEB1-216ENST00000618449 PI4KBQ9UBF8 816 aa12.98□□□□□ -0.33
CPEB1-216ENST00000618449 FAM196BA6NMK8 535 aa12.97□□□□□ -0.33
CPEB1-216ENST00000618449 TOP1P11387 765 aaKnown RBP12.97□□□□□ -0.33
CPEB1-216ENST00000618449 SAFBQ15424 915 aaKnown RBP eCLIP12.97□□□□□ -0.33
CPEB1-216ENST00000618449 CCAR1Q8IX12 1150 aaKnown RBP12.97□□□□□ -0.33
CPEB1-216ENST00000618449 JDP2Q8WYK2 163 aa12.97□□□□□ -0.33
CPEB1-216ENST00000618449 POLR3EQ9NVU0 708 aa12.97□□□□□ -0.33
CPEB1-216ENST00000618449 HDAC9Q9UKV0 1011 aa12.97□□□□□ -0.33
CPEB1-216ENST00000618449 SIPA1L1O43166 1804 aa12.97□□□□□ -0.33
CPEB1-216ENST00000618449 IGKV6D-41A0A0C4DH26 115 aa12.97□□□□□ -0.33
CPEB1-216ENST00000618449 DLGAP5Q15398 846 aa12.97□□□□□ -0.33
CPEB1-216ENST00000618449 ANO6Q4KMQ2 910 aa12.97□□□□□ -0.33
CPEB1-216ENST00000618449 CCDC73Q6ZRK6 1079 aa12.97□□□□□ -0.33
CPEB1-216ENST00000618449 CLEC10AQ8IUN9 316 aa12.97□□□□□ -0.33
CPEB1-216ENST00000618449 LINC00301Q8NCQ3 95 aa12.97□□□□□ -0.33
CPEB1-216ENST00000618449 AGBL3Q8NEM8 1001 aa12.97□□□□□ -0.33
CPEB1-216ENST00000618449 NLGN2Q8NFZ4 835 aa12.97□□□□□ -0.33
CPEB1-216ENST00000618449 PIBF1Q8WXW3 757 aa12.97□□□□□ -0.33
CPEB1-216ENST00000618449 GOLPH3LQ9H4A5 285 aa12.97□□□□□ -0.33
CPEB1-216ENST00000618449 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.97□□□□□ -0.33
CPEB1-216ENST00000618449 MYH8P13535 1937 aa12.97□□□□□ -0.33
CPEB1-216ENST00000618449 BAZ2BQ9UIF8 2168 aaKnown RBP12.96□□□□□ -0.33
CPEB1-216ENST00000618449 PALM3A6NDB9 673 aaPredicted RBP12.96□□□□□ -0.33
CPEB1-216ENST00000618449 ENTPD3O75355 529 aa12.96□□□□□ -0.33
CPEB1-216ENST00000618449 GOLGA8HP0CJ92 632 aa12.96□□□□□ -0.33
CPEB1-216ENST00000618449 XBP1P17861 261 aa12.96□□□□□ -0.33
CPEB1-216ENST00000618449 PLCB2Q00722 1185 aa12.96□□□□□ -0.33
CPEB1-216ENST00000618449 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.96□□□□□ -0.33
CPEB1-216ENST00000618449 NOSTRINQ8IVI9 506 aa12.96□□□□□ -0.33
CPEB1-216ENST00000618449 CLRN2A0PK11 232 aa12.96□□□□□ -0.34
CPEB1-216ENST00000618449 AP5Z1O43299 807 aa12.96□□□□□ -0.34
CPEB1-216ENST00000618449 OFD1O75665 1012 aa12.96□□□□□ -0.34
CPEB1-216ENST00000618449 VEGFAP15692 232 aaPredicted RBP12.96□□□□□ -0.34
CPEB1-216ENST00000618449 ME1P48163 572 aa12.96□□□□□ -0.34
CPEB1-216ENST00000618449 GNAQP50148 359 aa12.96□□□□□ -0.34
CPEB1-216ENST00000618449 EIF6P56537 245 aaKnown RBP12.96□□□□□ -0.34
CPEB1-216ENST00000618449 NR5A1Q13285 461 aa12.96□□□□□ -0.34
CPEB1-216ENST00000618449 SLC35G1Q2M3R5 365 aa12.96□□□□□ -0.34
CPEB1-216ENST00000618449 ANO1Q5XXA6 986 aa12.96□□□□□ -0.34
CPEB1-216ENST00000618449 SASS6Q6UVJ0 657 aa12.96□□□□□ -0.34
CPEB1-216ENST00000618449 OXER1Q8TDS5 423 aa12.96□□□□□ -0.34
CPEB1-216ENST00000618449 PHF20Q9BVI0 1012 aa12.96□□□□□ -0.34
CPEB1-216ENST00000618449 FOXP1Q9H334 677 aaPredicted RBP12.96□□□□□ -0.34
CPEB1-216ENST00000618449 MPHOSPH10O00566 681 aaKnown RBP12.95□□□□□ -0.34
CPEB1-216ENST00000618449 CYTH3O43739 400 aa12.95□□□□□ -0.34
CPEB1-216ENST00000618449 SCG2P13521 617 aa12.95□□□□□ -0.34
CPEB1-216ENST00000618449 STK38Q15208 465 aa12.95□□□□□ -0.34
CPEB1-216ENST00000618449 PFKFB3Q16875 520 aaPredicted RBP12.95□□□□□ -0.34
CPEB1-216ENST00000618449 CIAPIN1Q6FI81 312 aa12.95□□□□□ -0.34
CPEB1-216ENST00000618449 CBX8Q9HC52 389 aa12.95□□□□□ -0.34
CPEB1-216ENST00000618449 ATRNL1Q5VV63 1379 aa12.95□□□□□ -0.34
CPEB1-216ENST00000618449 TCP10L2B9ZVM9 353 aa12.95□□□□□ -0.34
CPEB1-216ENST00000618449 YEATS4O95619 227 aa12.95□□□□□ -0.34
CPEB1-216ENST00000618449 USP17L2Q6R6M4 530 aa12.95□□□□□ -0.34
CPEB1-216ENST00000618449 FOXP4Q8IVH2 680 aaPredicted RBP12.95□□□□□ -0.34
CPEB1-216ENST00000618449 LRRC47Q8N1G4 583 aaKnown RBP12.95□□□□□ -0.34
CPEB1-216ENST00000618449 FSIP1Q8NA03 581 aa12.95□□□□□ -0.34
CPEB1-216ENST00000618449 TMOD2Q9NZR1 351 aa12.95□□□□□ -0.34
CPEB1-216ENST00000618449 ZNF70Q9UC06 446 aaPredicted RBP12.95□□□□□ -0.34
CPEB1-216ENST00000618449 CLIP2Q9UDT6 1046 aa12.95□□□□□ -0.34
CPEB1-216ENST00000618449 PCDHA7Q9UN72 937 aa12.95□□□□□ -0.34
CPEB1-216ENST00000618449 KLRF2D3W0D1 207 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms