RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 PLIN4Q96Q06 1357 aa29.61■■■□□ 2.33
PMS1-220ENST00000618056 FGAP02671 866 aa29.61■■■□□ 2.33
PMS1-220ENST00000618056 LBX2Q6XYB7 198 aa29.61■■■□□ 2.33
PMS1-220ENST00000618056 RBPJLQ9UBG7 517 aa29.61■■■□□ 2.33
PMS1-220ENST00000618056 IGKV6D-41A0A0C4DH26 115 aa29.6■■■□□ 2.33
PMS1-220ENST00000618056 KIAA1755Q5JYT7 1200 aa29.6■■■□□ 2.33
PMS1-220ENST00000618056 POTEEQ6S8J3 1075 aa29.6■■■□□ 2.33
PMS1-220ENST00000618056 CWC27Q6UX04 472 aaKnown RBP29.6■■■□□ 2.33
PMS1-220ENST00000618056 TXNRD2Q9NNW7 524 aa29.6■■■□□ 2.33
PMS1-220ENST00000618056 NYAP2Q9P242 653 aa29.6■■■□□ 2.33
PMS1-220ENST00000618056 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.6■■■□□ 2.33
PMS1-220ENST00000618056 MYPNQ86TC9 1320 aa29.6■■■□□ 2.33
PMS1-220ENST00000618056 TNPO2O14787 897 aaKnown RBP29.59■■■□□ 2.33
PMS1-220ENST00000618056 CENPQQ7L2Z9 268 aaPredicted RBP29.59■■■□□ 2.33
PMS1-220ENST00000618056 GPRC5AQ8NFJ5 357 aa29.59■■■□□ 2.33
PMS1-220ENST00000618056 LAMA4Q16363 1823 aa29.59■■■□□ 2.33
PMS1-220ENST00000618056 RBBP6Q7Z6E9 1792 aaKnown RBP29.58■■■□□ 2.33
PMS1-220ENST00000618056 ATP2B2Q01814 1243 aa29.58■■■□□ 2.33
PMS1-220ENST00000618056 SLC9C1Q4G0N8 1177 aa29.58■■■□□ 2.33
PMS1-220ENST00000618056 RABGAP1Q9Y3P9 1069 aa29.58■■■□□ 2.33
PMS1-220ENST00000618056 ERVK-9P63128 1117 aa29.57■■■□□ 2.32
PMS1-220ENST00000618056 ERVK-24P63145 666 aa29.57■■■□□ 2.32
PMS1-220ENST00000618056 PRKCZQ05513 592 aa29.57■■■□□ 2.32
PMS1-220ENST00000618056 CTDSPL2Q05D32 466 aa29.57■■■□□ 2.32
PMS1-220ENST00000618056 NEDD1Q8NHV4 660 aa29.57■■■□□ 2.32
PMS1-220ENST00000618056 GOPCQ9HD26 462 aa29.57■■■□□ 2.32
PMS1-220ENST00000618056 A0A0G2JMZ2 1700 aa29.57■■■□□ 2.32
PMS1-220ENST00000618056 SPDYE16A6NNV3 312 aaPredicted RBP29.56■■■□□ 2.32
PMS1-220ENST00000618056 WDR46O15213 610 aaKnown RBP29.56■■■□□ 2.32
PMS1-220ENST00000618056 FGRP09769 529 aa29.56■■■□□ 2.32
PMS1-220ENST00000618056 NBPF11Q86T75 865 aa29.56■■■□□ 2.32
PMS1-220ENST00000618056 COA7Q96BR5 231 aa29.56■■■□□ 2.32
PMS1-220ENST00000618056 PLXNB2O15031 1838 aa29.55■■■□□ 2.32
PMS1-220ENST00000618056 TSPY3P0CV98 308 aa29.55■■■□□ 2.32
PMS1-220ENST00000618056 TSPY8P0CW00 308 aa29.55■■■□□ 2.32
PMS1-220ENST00000618056 RGS19P49795 217 aa29.55■■■□□ 2.32
PMS1-220ENST00000618056 COG2Q14746 738 aa29.55■■■□□ 2.32
PMS1-220ENST00000618056 SPICE1Q8N0Z3 855 aa29.55■■■□□ 2.32
PMS1-220ENST00000618056 RAET1EQ8TD07 263 aa29.55■■■□□ 2.32
PMS1-220ENST00000618056 TANGO6Q9C0B7 1094 aa29.55■■■□□ 2.32
PMS1-220ENST00000618056 MTMR4Q9NYA4 1195 aa29.55■■■□□ 2.32
PMS1-220ENST00000618056 HOXC10Q9NYD6 342 aa29.55■■■□□ 2.32
PMS1-220ENST00000618056 GABRQQ9UN88 632 aa29.55■■■□□ 2.32
PMS1-220ENST00000618056 ORC4O43929 436 aa29.55■■■□□ 2.32
PMS1-220ENST00000618056 CEP95Q96GE4 821 aa29.55■■■□□ 2.32
PMS1-220ENST00000618056 ZNF333Q96JL9 665 aa29.55■■■□□ 2.32
PMS1-220ENST00000618056 PAGR1Q9BTK6 254 aa29.55■■■□□ 2.32
PMS1-220ENST00000618056 SYNPO2Q9UMS6 1093 aa29.55■■■□□ 2.32
PMS1-220ENST00000618056 PEX10O60683 326 aa29.54■■■□□ 2.32
PMS1-220ENST00000618056 TFAP4Q01664 338 aa29.54■■■□□ 2.32
PMS1-220ENST00000618056 Q3C1V9 767 aa29.54■■■□□ 2.32
PMS1-220ENST00000618056 MKL1Q969V6 931 aa29.54■■■□□ 2.32
PMS1-220ENST00000618056 TACC3Q9Y6A5 838 aa29.54■■■□□ 2.32
PMS1-220ENST00000618056 CNMDO75829 334 aa29.53■■■□□ 2.32
PMS1-220ENST00000618056 FLT3LGP49771 235 aa29.53■■■□□ 2.32
PMS1-220ENST00000618056 SOX10P56693 466 aa29.53■■■□□ 2.32
PMS1-220ENST00000618056 IRF5Q13568 498 aa29.53■■■□□ 2.32
PMS1-220ENST00000618056 FAM47AQ5JRC9 791 aa29.53■■■□□ 2.32
PMS1-220ENST00000618056 COL11A1P12107 1806 aaPredicted RBP29.52■■■□□ 2.32
PMS1-220ENST00000618056 TTLL1O95922 423 aa29.52■■■□□ 2.32
PMS1-220ENST00000618056 INCENPQ9NQS7 918 aa29.52■■■□□ 2.32
PMS1-220ENST00000618056 CLIP2Q9UDT6 1046 aa29.52■■■□□ 2.32
PMS1-220ENST00000618056 RAD50Q92878 1312 aa29.51■■■□□ 2.31
PMS1-220ENST00000618056 MAPK4P31152 587 aa29.51■■■□□ 2.31
PMS1-220ENST00000618056 GRK4P32298 578 aa29.51■■■□□ 2.31
PMS1-220ENST00000618056 PPP4R3BQ5MIZ7 849 aa29.51■■■□□ 2.31
PMS1-220ENST00000618056 DSCC1Q9BVC3 393 aa29.51■■■□□ 2.31
PMS1-220ENST00000618056 PCP11498 1178 aaKnown RBP29.5■■■□□ 2.31
PMS1-220ENST00000618056 DSG3P32926 999 aa29.5■■■□□ 2.31
PMS1-220ENST00000618056 CCNA1P78396 465 aa29.5■■■□□ 2.31
PMS1-220ENST00000618056 SH3TC2Q8TF17 1288 aa29.5■■■□□ 2.31
PMS1-220ENST00000618056 TSPY2A6NKD2 308 aa29.49■■■□□ 2.31
PMS1-220ENST00000618056 FLOT1O75955 427 aa29.49■■■□□ 2.31
PMS1-220ENST00000618056 MB21D1Q8N884 522 aa29.49■■■□□ 2.31
PMS1-220ENST00000618056 SLAIN1Q8ND83 568 aa29.49■■■□□ 2.31
PMS1-220ENST00000618056 NBPF3Q9H094 633 aa29.49■■■□□ 2.31
PMS1-220ENST00000618056 PORCNQ9H237 461 aa29.49■■■□□ 2.31
PMS1-220ENST00000618056 BTBD7Q9P203 1132 aa29.49■■■□□ 2.31
PMS1-220ENST00000618056 GJD2Q9UKL4 321 aa29.49■■■□□ 2.31
PMS1-220ENST00000618056 F5H6K3 240 aa29.48■■■□□ 2.31
PMS1-220ENST00000618056 CHMLP26374 656 aa29.48■■■□□ 2.31
PMS1-220ENST00000618056 KLRC3Q07444 240 aa29.48■■■□□ 2.31
PMS1-220ENST00000618056 PXYLP1Q8TE99 480 aa29.48■■■□□ 2.31
PMS1-220ENST00000618056 RUFY2Q8WXA3 655 aa29.48■■■□□ 2.31
PMS1-220ENST00000618056 IL25Q9H293 177 aa29.48■■■□□ 2.31
PMS1-220ENST00000618056 RANBP6O60518 1105 aaKnown RBP29.48■■■□□ 2.31
PMS1-220ENST00000618056 HAND2P61296 217 aa29.48■■■□□ 2.31
PMS1-220ENST00000618056 AKNAD1Q5T1N1 836 aa29.48■■■□□ 2.31
PMS1-220ENST00000618056 STAG1Q8WVM7 1258 aa29.48■■■□□ 2.31
PMS1-220ENST00000618056 RAD21O60216 631 aa29.47■■■□□ 2.31
PMS1-220ENST00000618056 ADCY3O60266 1144 aa29.47■■■□□ 2.31
PMS1-220ENST00000618056 NDUFB10O96000 172 aa29.47■■■□□ 2.31
PMS1-220ENST00000618056 FAM83BQ5T0W9 1011 aa29.47■■■□□ 2.31
PMS1-220ENST00000618056 CCAR1Q8IX12 1150 aaKnown RBP29.47■■■□□ 2.31
PMS1-220ENST00000618056 GMCL1P1Q8NEA9 526 aa29.47■■■□□ 2.31
PMS1-220ENST00000618056 ADAMTS5Q9UNA0 930 aa29.47■■■□□ 2.31
PMS1-220ENST00000618056 MKI67P46013 3256 aaKnown RBP29.47■■■□□ 2.31
PMS1-220ENST00000618056 ZNF213O14771 459 aa29.46■■■□□ 2.31
PMS1-220ENST00000618056 NOVP48745 357 aa29.46■■■□□ 2.31
PMS1-220ENST00000618056 GPR142Q7Z601 462 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms