RNA–Protein interactions for RNA: ENST00000617769.1

PCDHA13-203, Transcript of protocadherin alpha 13, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA13, Length 2,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-203ENST00000617769 MLKLQ8NB16 471 aa22.79■■□□□ 1.24
PCDHA13-203ENST00000617769 MED15Q96RN5 788 aa22.79■■□□□ 1.24
PCDHA13-203ENST00000617769 ZSCAN10Q96SZ4 725 aaPredicted RBP22.78■■□□□ 1.24
PCDHA13-203ENST00000617769 ZNF446Q9NWS9 450 aa22.78■■□□□ 1.24
PCDHA13-203ENST00000617769 ARHGAP6O43182 974 aa22.78■■□□□ 1.24
PCDHA13-203ENST00000617769 TBX2Q13207 712 aaPredicted RBP22.78■■□□□ 1.24
PCDHA13-203ENST00000617769 MTA3Q9BTC8 594 aa22.78■■□□□ 1.24
PCDHA13-203ENST00000617769 ADKP55263 362 aaKnown RBP22.77■■□□□ 1.24
PCDHA13-203ENST00000617769 FAM177A1Q8N128 213 aaPredicted RBP22.77■■□□□ 1.24
PCDHA13-203ENST00000617769 ENOX1Q8TC92 643 aaKnown RBP22.77■■□□□ 1.24
PCDHA13-203ENST00000617769 SAMSN1Q9NSI8 373 aaKnown RBP22.77■■□□□ 1.24
PCDHA13-203ENST00000617769 VPS54Q9P1Q0 977 aa22.77■■□□□ 1.24
PCDHA13-203ENST00000617769 CEP131Q9UPN4 1083 aa22.77■■□□□ 1.24
PCDHA13-203ENST00000617769 KRT222Q8N1A0 295 aa22.77■■□□□ 1.24
PCDHA13-203ENST00000617769 BAG1Q99933 345 aaPredicted RBP22.77■■□□□ 1.24
PCDHA13-203ENST00000617769 CRNKL1Q9BZJ0 848 aaKnown RBP22.77■■□□□ 1.24
PCDHA13-203ENST00000617769 PPP2R2CQ9Y2T4 447 aa22.77■■□□□ 1.24
PCDHA13-203ENST00000617769 MYH2Q9UKX2 1941 aa22.76■■□□□ 1.23
PCDHA13-203ENST00000617769 VWA3AA6NCI4 1184 aa22.76■■□□□ 1.23
PCDHA13-203ENST00000617769 USP17L8P0C7I0 530 aa22.76■■□□□ 1.23
PCDHA13-203ENST00000617769 RCAN1P53805 252 aa22.76■■□□□ 1.23
PCDHA13-203ENST00000617769 EARS2Q5JPH6 523 aaKnown RBP22.76■■□□□ 1.23
PCDHA13-203ENST00000617769 SPECC1LQ69YQ0 1117 aa22.76■■□□□ 1.23
PCDHA13-203ENST00000617769 KRT27Q7Z3Y8 459 aa22.76■■□□□ 1.23
PCDHA13-203ENST00000617769 DACH1Q9UI36 760 aa22.76■■□□□ 1.23
PCDHA13-203ENST00000617769 XDHP47989 1333 aa22.76■■□□□ 1.23
PCDHA13-203ENST00000617769 ZSCAN12O43309 604 aa22.76■■□□□ 1.23
PCDHA13-203ENST00000617769 URI1O94763 535 aaPredicted RBP22.76■■□□□ 1.23
PCDHA13-203ENST00000617769 H2AFXP16104 143 aaPredicted RBP22.76■■□□□ 1.23
PCDHA13-203ENST00000617769 DDR1Q08345 913 aa22.76■■□□□ 1.23
PCDHA13-203ENST00000617769 IFIT1BQ5T764 474 aaKnown RBP22.76■■□□□ 1.23
PCDHA13-203ENST00000617769 FCHSD1Q86WN1 690 aa22.76■■□□□ 1.23
PCDHA13-203ENST00000617769 PROM2Q8N271 834 aa22.76■■□□□ 1.23
PCDHA13-203ENST00000617769 TC2NQ8N9U0 490 aa22.76■■□□□ 1.23
PCDHA13-203ENST00000617769 RNF26Q9BY78 433 aaPredicted RBP22.76■■□□□ 1.23
PCDHA13-203ENST00000617769 MYH6P13533 1939 aa22.75■■□□□ 1.23
PCDHA13-203ENST00000617769 ARHGAP29Q52LW3 1261 aa22.75■■□□□ 1.23
PCDHA13-203ENST00000617769 MCM9Q9NXL9 1143 aa22.75■■□□□ 1.23
PCDHA13-203ENST00000617769 A0A087X0B3 334 aa22.74■■□□□ 1.23
PCDHA13-203ENST00000617769 UFL1O94874 794 aa22.74■■□□□ 1.23
PCDHA13-203ENST00000617769 ADRA2BP18089 450 aa22.74■■□□□ 1.23
PCDHA13-203ENST00000617769 AKAP17AQ02040 695 aaKnown RBP22.74■■□□□ 1.23
PCDHA13-203ENST00000617769 PKN1Q16512 942 aa22.74■■□□□ 1.23
PCDHA13-203ENST00000617769 TRIML1Q8N9V2 468 aa22.74■■□□□ 1.23
PCDHA13-203ENST00000617769 DHX58Q96C10 678 aa22.74■■□□□ 1.23
PCDHA13-203ENST00000617769 EPSTI1Q96J88 318 aa22.74■■□□□ 1.23
PCDHA13-203ENST00000617769 LEMD3Q9Y2U8 911 aa22.74■■□□□ 1.23
PCDHA13-203ENST00000617769 PLEKHA8P1O95397 391 aa22.74■■□□□ 1.23
PCDHA13-203ENST00000617769 LDHBP07195 334 aaKnown RBP22.74■■□□□ 1.23
PCDHA13-203ENST00000617769 KANK3Q6NY19 840 aa22.74■■□□□ 1.23
PCDHA13-203ENST00000617769 SPATA20Q8TB22 786 aa22.74■■□□□ 1.23
PCDHA13-203ENST00000617769 FAM53CQ9NYF3 392 aa22.74■■□□□ 1.23
PCDHA13-203ENST00000617769 ST5P78524 1137 aa22.73■■□□□ 1.23
PCDHA13-203ENST00000617769 SH3RF3Q8TEJ3 882 aaPredicted RBP22.73■■□□□ 1.23
PCDHA13-203ENST00000617769 PARP3Q9Y6F1 533 aa22.73■■□□□ 1.23
PCDHA13-203ENST00000617769 PDS5AQ29RF7 1337 aaKnown RBP22.73■■□□□ 1.23
PCDHA13-203ENST00000617769 TRIM75PA6NK02 468 aa22.73■■□□□ 1.23
PCDHA13-203ENST00000617769 AFMP43652 599 aa22.73■■□□□ 1.23
PCDHA13-203ENST00000617769 TOGARAM2Q6ZUX3 1019 aa22.73■■□□□ 1.23
PCDHA13-203ENST00000617769 IQCA1Q86XH1 822 aa22.73■■□□□ 1.23
PCDHA13-203ENST00000617769 DUOX1Q9NRD9 1551 aa22.72■■□□□ 1.23
PCDHA13-203ENST00000617769 WNT7AO00755 349 aa22.72■■□□□ 1.23
PCDHA13-203ENST00000617769 STX10O60499 249 aa22.72■■□□□ 1.23
PCDHA13-203ENST00000617769 CASP1P29466 404 aa22.72■■□□□ 1.23
PCDHA13-203ENST00000617769 PLCD1P51178 756 aa22.72■■□□□ 1.23
PCDHA13-203ENST00000617769 GABPB1Q06547 395 aaPredicted RBP22.72■■□□□ 1.23
PCDHA13-203ENST00000617769 V9GY48 417 aaPredicted RBP22.72■■□□□ 1.23
PCDHA13-203ENST00000617769 CLCN6P51797 869 aa22.72■■□□□ 1.23
PCDHA13-203ENST00000617769 FUT2Q10981 343 aa22.72■■□□□ 1.23
PCDHA13-203ENST00000617769 UBXN4Q92575 508 aa22.72■■□□□ 1.23
PCDHA13-203ENST00000617769 DYNLL2Q96FJ2 89 aa22.72■■□□□ 1.23
PCDHA13-203ENST00000617769 PHF20Q9BVI0 1012 aa22.72■■□□□ 1.23
PCDHA13-203ENST00000617769 XBP1P17861 261 aa22.71■■□□□ 1.23
PCDHA13-203ENST00000617769 CRY2Q49AN0 593 aa22.71■■□□□ 1.23
PCDHA13-203ENST00000617769 MNS1Q8NEH6 495 aa22.71■■□□□ 1.23
PCDHA13-203ENST00000617769 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.71■■□□□ 1.23
PCDHA13-203ENST00000617769 KIF20AO95235 890 aa22.71■■□□□ 1.23
PCDHA13-203ENST00000617769 FGRP09769 529 aa22.71■■□□□ 1.23
PCDHA13-203ENST00000617769 KRT2P35908 639 aa22.71■■□□□ 1.23
PCDHA13-203ENST00000617769 NR1I3Q14994 352 aa22.71■■□□□ 1.23
PCDHA13-203ENST00000617769 KLHL10Q6JEL2 608 aa22.71■■□□□ 1.23
PCDHA13-203ENST00000617769 ZNF804AQ7Z570 1209 aa22.71■■□□□ 1.23
PCDHA13-203ENST00000617769 CATIPQ7Z7H3 387 aa22.71■■□□□ 1.23
PCDHA13-203ENST00000617769 WDR24Q96S15 920 aa22.71■■□□□ 1.23
PCDHA13-203ENST00000617769 CARD6Q9BX69 1037 aa22.71■■□□□ 1.23
PCDHA13-203ENST00000617769 ATP8A2Q9NTI2 1148 aa22.71■■□□□ 1.23
PCDHA13-203ENST00000617769 ERCC5P28715 1186 aaPredicted RBP22.7■■□□□ 1.22
PCDHA13-203ENST00000617769 USP5P45974 858 aa22.7■■□□□ 1.22
PCDHA13-203ENST00000617769 PPP2R5BQ15173 497 aa22.7■■□□□ 1.22
PCDHA13-203ENST00000617769 TXNRD1Q16881 649 aa22.7■■□□□ 1.22
PCDHA13-203ENST00000617769 NOM1Q5C9Z4 860 aaKnown RBP22.7■■□□□ 1.22
PCDHA13-203ENST00000617769 SPTY2D1Q68D10 685 aaPredicted RBP22.7■■□□□ 1.22
PCDHA13-203ENST00000617769 UBR3Q6ZT12 1888 aa22.7■■□□□ 1.22
PCDHA13-203ENST00000617769 WDR66Q8TBY9 1149 aa22.7■■□□□ 1.22
PCDHA13-203ENST00000617769 GNG11P61952 73 aa22.7■■□□□ 1.22
PCDHA13-203ENST00000617769 TROAPQ12815 778 aa22.7■■□□□ 1.22
PCDHA13-203ENST00000617769 SLC27A3Q5K4L6 730 aa22.7■■□□□ 1.22
PCDHA13-203ENST00000617769 SYMPKQ92797 1274 aaKnown RBP22.7■■□□□ 1.22
PCDHA13-203ENST00000617769 NOL10Q9BSC4 688 aaKnown RBP22.7■■□□□ 1.22
PCDHA13-203ENST00000617769 SLFN14P0C7P3 912 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms