RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 ANO1Q5XXA6 986 aa10.38□□□□□ -0.75
GPC6-202ENST00000617456 METTL16Q86W50 562 aaKnown RBP10.38□□□□□ -0.75
GPC6-202ENST00000617456 ERC1Q8IUD2 1116 aa10.38□□□□□ -0.75
GPC6-202ENST00000617456 TRPV1Q8NER1 839 aa10.38□□□□□ -0.75
GPC6-202ENST00000617456 MAFAQ8NHW3 353 aaPredicted RBP10.38□□□□□ -0.75
GPC6-202ENST00000617456 NPLOC4Q8TAT6 608 aa10.38□□□□□ -0.75
GPC6-202ENST00000617456 LPAR1Q92633 364 aa10.38□□□□□ -0.75
GPC6-202ENST00000617456 IVNS1ABPQ9Y6Y0 642 aa10.38□□□□□ -0.75
GPC6-202ENST00000617456 DNM1LO00429 736 aa10.37□□□□□ -0.75
GPC6-202ENST00000617456 MSCO60682 206 aa10.37□□□□□ -0.75
GPC6-202ENST00000617456 C9orf50Q5SZB4 431 aa10.37□□□□□ -0.75
GPC6-202ENST00000617456 CATSPERGQ6ZRH7 1159 aa10.37□□□□□ -0.75
GPC6-202ENST00000617456 ACER1Q8TDN7 264 aa10.37□□□□□ -0.75
GPC6-202ENST00000617456 MYLIPQ8WY64 445 aa10.37□□□□□ -0.75
GPC6-202ENST00000617456 BADQ92934 168 aa10.37□□□□□ -0.75
GPC6-202ENST00000617456 DBNDD2Q9BQY9 259 aa10.37□□□□□ -0.75
GPC6-202ENST00000617456 SEMA6BQ9H3T3 888 aa10.37□□□□□ -0.75
GPC6-202ENST00000617456 BTBD7Q9P203 1132 aa10.37□□□□□ -0.75
GPC6-202ENST00000617456 VCANP13611 3396 aa10.37□□□□□ -0.75
GPC6-202ENST00000617456 KBTBD13C9JR72 458 aa10.36□□□□□ -0.75
GPC6-202ENST00000617456 SURF6O75683 361 aaKnown RBP10.36□□□□□ -0.75
GPC6-202ENST00000617456 CYP2E1P05181 493 aaPredicted RBP10.36□□□□□ -0.75
GPC6-202ENST00000617456 VCAM1P19320 739 aa10.36□□□□□ -0.75
GPC6-202ENST00000617456 CYP7A1P22680 504 aa10.36□□□□□ -0.75
GPC6-202ENST00000617456 ZAP70P43403 619 aa10.36□□□□□ -0.75
GPC6-202ENST00000617456 USP5P45974 858 aa10.36□□□□□ -0.75
GPC6-202ENST00000617456 GRB14Q14449 540 aa10.36□□□□□ -0.75
GPC6-202ENST00000617456 TRIM60Q495X7 471 aa10.36□□□□□ -0.75
GPC6-202ENST00000617456 TNNI3KQ59H18 835 aa10.36□□□□□ -0.75
GPC6-202ENST00000617456 SLC39A5Q6ZMH5 540 aa10.36□□□□□ -0.75
GPC6-202ENST00000617456 DPP9Q86TI2 863 aa10.36□□□□□ -0.75
GPC6-202ENST00000617456 ITPRIPQ8IWB1 547 aa10.36□□□□□ -0.75
GPC6-202ENST00000617456 RPAP2Q8IXW5 612 aaPredicted RBP10.36□□□□□ -0.75
GPC6-202ENST00000617456 MIGA1Q8NAN2 632 aa10.36□□□□□ -0.75
GPC6-202ENST00000617456 C12orf42Q96LP6 360 aa10.36□□□□□ -0.75
GPC6-202ENST00000617456 PIH1D3Q9NQM4 214 aaKnown RBP10.36□□□□□ -0.75
GPC6-202ENST00000617456 FPGT-TNNI3KV9GXZ4 949 aa10.36□□□□□ -0.75
GPC6-202ENST00000617456 SPDYE16A6NNV3 312 aaPredicted RBP10.35□□□□□ -0.75
GPC6-202ENST00000617456 CYBAP13498 195 aa10.35□□□□□ -0.75
GPC6-202ENST00000617456 FOSL2P15408 326 aa10.35□□□□□ -0.75
GPC6-202ENST00000617456 USP14P54578 494 aa10.35□□□□□ -0.75
GPC6-202ENST00000617456 OS9Q13438 667 aaPredicted RBP10.35□□□□□ -0.75
GPC6-202ENST00000617456 ABCB5Q2M3G0 1257 aa10.35□□□□□ -0.75
GPC6-202ENST00000617456 CERKLQ49MI3 558 aaPredicted RBP10.35□□□□□ -0.75
GPC6-202ENST00000617456 ARRDC4Q8NCT1 418 aa10.35□□□□□ -0.75
GPC6-202ENST00000617456 FERMT2Q96AC1 680 aa10.35□□□□□ -0.75
GPC6-202ENST00000617456 TTYH1Q9H313 450 aaPredicted RBP10.35□□□□□ -0.75
GPC6-202ENST00000617456 RPAP3Q9H6T3 665 aaPredicted RBP10.35□□□□□ -0.75
GPC6-202ENST00000617456 DDX19BQ9UMR2 479 aa10.35□□□□□ -0.75
GPC6-202ENST00000617456 PRUNE2Q8WUY3 3088 aa10.35□□□□□ -0.75
GPC6-202ENST00000617456 IDH1O75874 414 aaKnown RBP10.34□□□□□ -0.75
GPC6-202ENST00000617456 HOXC6P09630 235 aa10.34□□□□□ -0.75
GPC6-202ENST00000617456 ADORA2AP29274 412 aa10.34□□□□□ -0.75
GPC6-202ENST00000617456 ADCYAP1R1P41586 468 aa10.34□□□□□ -0.75
GPC6-202ENST00000617456 PRAMEF19Q5SWL8 479 aa10.34□□□□□ -0.75
GPC6-202ENST00000617456 CEP85Q6P2H3 762 aa10.34□□□□□ -0.75
GPC6-202ENST00000617456 SH3RF1Q7Z6J0 888 aa10.34□□□□□ -0.75
GPC6-202ENST00000617456 TICAM2Q86XR7 235 aa10.34□□□□□ -0.75
GPC6-202ENST00000617456 KIAA1683Q9H0B3 1180 aa10.34□□□□□ -0.75
GPC6-202ENST00000617456 CABP5Q9NP86 173 aa10.34□□□□□ -0.75
GPC6-202ENST00000617456 PRDM6Q9NQX0 595 aa10.34□□□□□ -0.75
GPC6-202ENST00000617456 PDLIM7Q9NR12 457 aa10.34□□□□□ -0.75
GPC6-202ENST00000617456 SERPINB13Q9UIV8 391 aa10.34□□□□□ -0.75
GPC6-202ENST00000617456 TNNQ9UQP3 1299 aa10.34□□□□□ -0.75
GPC6-202ENST00000617456 FRMPD3Q5JV73 1810 aa10.34□□□□□ -0.75
GPC6-202ENST00000617456 EYSQ5T1H1 3165 aa10.34□□□□□ -0.75
GPC6-202ENST00000617456 MAST2Q6P0Q8 1798 aa10.34□□□□□ -0.75
GPC6-202ENST00000617456 TRIM43BA6NCK2 446 aa10.33□□□□□ -0.76
GPC6-202ENST00000617456 HMMRO75330 724 aa10.33□□□□□ -0.76
GPC6-202ENST00000617456 RLBP1P12271 317 aa10.33□□□□□ -0.76
GPC6-202ENST00000617456 SMAD3P84022 425 aaKnown RBP10.33□□□□□ -0.76
GPC6-202ENST00000617456 PLS1Q14651 629 aa10.33□□□□□ -0.76
GPC6-202ENST00000617456 TATDN1Q6P1N9 297 aa10.33□□□□□ -0.76
GPC6-202ENST00000617456 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.33□□□□□ -0.76
GPC6-202ENST00000617456 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.33□□□□□ -0.76
GPC6-202ENST00000617456 TRIM43Q96BQ3 446 aaPredicted RBP10.33□□□□□ -0.76
GPC6-202ENST00000617456 MOV10L1Q9BXT6 1211 aaKnown RBP10.33□□□□□ -0.76
GPC6-202ENST00000617456 TANGO6Q9C0B7 1094 aa10.33□□□□□ -0.76
GPC6-202ENST00000617456 CDK5RAP2Q96SN8 1893 aa10.32□□□□□ -0.76
GPC6-202ENST00000617456 MPHOSPH10O00566 681 aaKnown RBP10.32□□□□□ -0.76
GPC6-202ENST00000617456 SEPT4O43236 478 aa10.32□□□□□ -0.76
GPC6-202ENST00000617456 COBLO75128 1261 aa10.32□□□□□ -0.76
GPC6-202ENST00000617456 RAB11FIP3O75154 756 aa10.32□□□□□ -0.76
GPC6-202ENST00000617456 NCLP19338 710 aaKnown RBP10.32□□□□□ -0.76
GPC6-202ENST00000617456 ERCC3P19447 782 aa10.32□□□□□ -0.76
GPC6-202ENST00000617456 GUCY1A2P33402 732 aa10.32□□□□□ -0.76
GPC6-202ENST00000617456 TLE2Q04725 743 aa10.32□□□□□ -0.76
GPC6-202ENST00000617456 SEPT2Q15019 361 aa10.32□□□□□ -0.76
GPC6-202ENST00000617456 LRRC41Q15345 812 aa10.32□□□□□ -0.76
GPC6-202ENST00000617456 FAM47AQ5JRC9 791 aa10.32□□□□□ -0.76
GPC6-202ENST00000617456 OLFML2BQ68BL8 750 aa10.32□□□□□ -0.76
GPC6-202ENST00000617456 LBX2Q6XYB7 198 aa10.32□□□□□ -0.76
GPC6-202ENST00000617456 TTC6Q86TZ1 520 aa10.32□□□□□ -0.76
GPC6-202ENST00000617456 MAGEB6Q8N7X4 407 aa10.32□□□□□ -0.76
GPC6-202ENST00000617456 RNPC3Q96LT9 517 aaKnown RBP10.32□□□□□ -0.76
GPC6-202ENST00000617456 CCDC8Q9H0W5 538 aaPredicted RBP10.32□□□□□ -0.76
GPC6-202ENST00000617456 ZBTB40Q9NUA8 1239 aa10.32□□□□□ -0.76
GPC6-202ENST00000617456 TLR7Q9NYK1 1049 aaKnown RBP10.32□□□□□ -0.76
GPC6-202ENST00000617456 PRDM4Q9UKN5 801 aa10.32□□□□□ -0.76
GPC6-202ENST00000617456 LTBP2Q14767 1821 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms