RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 CCDC144BQ3MJ40 725 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 SGO2Q562F6 1265 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 CCDC91Q7Z6B0 441 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 DDX50Q9BQ39 737 aaKnown RBP3.78□□□□□ -1.8
LPP-220ENST00000617246 MKNK1Q9BUB5 465 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 RRAGCQ9HB90 399 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 DDX21Q9NR30 783 aaKnown RBP eCLIP3.78□□□□□ -1.8
LPP-220ENST00000617246 MAST2Q6P0Q8 1798 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 MYBL2P10244 700 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 SMTNP53814 917 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 GABPAQ06546 454 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 TMED8Q6PL24 325 aaPredicted RBP3.78□□□□□ -1.8
LPP-220ENST00000617246 TMTC2Q8N394 836 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 CCDC24Q8N4L8 307 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 FSIP1Q8NA03 581 aa3.78□□□□□ -1.8
LPP-220ENST00000617246 CAND2O75155 1236 aa3.78□□□□□ -1.81
LPP-220ENST00000617246 HIBADHP31937 336 aaKnown RBP3.78□□□□□ -1.81
LPP-220ENST00000617246 NOP9Q86U38 636 aaKnown RBP3.78□□□□□ -1.81
LPP-220ENST00000617246 STK11IPQ8N1F8 1099 aa3.78□□□□□ -1.81
LPP-220ENST00000617246 HMX1Q9NP08 348 aaPredicted RBP3.78□□□□□ -1.81
LPP-220ENST00000617246 USP25Q9UHP3 1055 aa3.78□□□□□ -1.81
LPP-220ENST00000617246 MRVI1Q9Y6F6 885 aa3.78□□□□□ -1.81
LPP-220ENST00000617246 POMCP01189 267 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 IL6STP40189 918 aaPredicted RBP3.77□□□□□ -1.81
LPP-220ENST00000617246 MKRN3Q13064 507 aaKnown RBP3.77□□□□□ -1.81
LPP-220ENST00000617246 GLG1Q92896 1179 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 CSRNP1Q96S65 589 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 SEZ6LQ9BYH1 1024 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 SLC28A3Q9HAS3 691 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 FAM114A2Q9NRY5 505 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 ANO9A1A5B4 782 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 WAPLQ7Z5K2 1190 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 C21orf2O43822 256 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 RAB11FIP3O75154 756 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 BBOX1O75936 387 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 MMP10P09238 476 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 PATL1Q86TB9 770 aaKnown RBP3.77□□□□□ -1.81
LPP-220ENST00000617246 TTC1Q99614 292 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 FANCFQ9NPI8 374 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 ABCB11O95342 1321 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 SCN11AQ9UI33 1791 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 GOLGA6L9A6NEM1 432 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 RRS1Q15050 365 aaKnown RBP3.77□□□□□ -1.81
LPP-220ENST00000617246 USPL1Q5W0Q7 1092 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 PSRC1Q6PGN9 363 aaPredicted RBP3.77□□□□□ -1.81
LPP-220ENST00000617246 PTPRUQ92729 1446 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 LRG1P02750 347 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 SRSF11Q05519 484 aaKnown RBP3.77□□□□□ -1.81
LPP-220ENST00000617246 THEM5Q8N1Q8 247 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 GPCPD1Q9NPB8 672 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 CLIP2Q9UDT6 1046 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 TRIM75PA6NK02 468 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 MLYCDO95822 493 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 CENPCQ03188 943 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 CCDC85AQ96PX6 553 aaPredicted RBP3.77□□□□□ -1.81
LPP-220ENST00000617246 WDR64B1ANS9 1081 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 KRT33BQ14525 404 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 TMEM132BQ14DG7 1078 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 ARMCX5Q6P1M9 558 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 PTH1RQ03431 593 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 IFIT1BQ5T764 474 aaKnown RBP3.77□□□□□ -1.81
LPP-220ENST00000617246 IFNL1Q8IU54 200 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 CABLES1Q8TDN4 633 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 YME1L1Q96TA2 773 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 PHTF1Q9UMS5 762 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 NUB1Q9Y5A7 615 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 PCDHB12Q9Y5F1 795 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 SHANK3Q9BYB0 1731 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 GNA11P29992 359 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 MRPS17Q9Y2R5 130 aaKnown RBP3.77□□□□□ -1.81
LPP-220ENST00000617246 INPP4BO15327 924 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 CSPG5O95196 566 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 NT5C2P49902 561 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 AEBP1Q8IUX7 1158 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 MICALL2Q8IY33 904 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 STARD7Q9NQZ5 370 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.77□□□□□ -1.81
LPP-220ENST00000617246 ATAD5Q96QE3 1844 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 BIN1O00499 593 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 SURF6O75683 361 aaKnown RBP3.77□□□□□ -1.81
LPP-220ENST00000617246 SSR1P43307 286 aaKnown RBP3.77□□□□□ -1.81
LPP-220ENST00000617246 TYRO3Q06418 890 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 UCMAQ8WVF2 138 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 MMP19Q99542 508 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 ABI2Q9NYB9 513 aaPredicted RBP3.77□□□□□ -1.81
LPP-220ENST00000617246 DDX11L8A8MPP1 907 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 CYP7A1P22680 504 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 COPB1P53618 953 aaKnown RBP3.77□□□□□ -1.81
LPP-220ENST00000617246 IFNL3Q8IZI9 196 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 SLAIN1Q8ND83 568 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 TSPYL1Q9H0U9 437 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 POLIQ9UNA4 740 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 GOLGA8AA7E2F4 631 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 SEMA3EO15041 775 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 FAM167AQ96KS9 214 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 IGSF9BQ9UPX0 1349 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 SPATA31E1Q6ZUB1 1445 aa3.77□□□□□ -1.81
LPP-220ENST00000617246 GIPC1O14908 333 aa3.76□□□□□ -1.81
LPP-220ENST00000617246 NPM3O75607 178 aaKnown RBP3.76□□□□□ -1.81
LPP-220ENST00000617246 CA4P22748 312 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms