RNA–Protein interactions for RNA: ENST00000616795.1

CCDC113-206, Transcript of coiled-coil domain containing 113, humanhuman

TSL 5 BASIC

Gene CCDC113, Length 891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-206ENST00000616795 TMX2Q9Y320 296 aa16.27■□□□□ 0.2
CCDC113-206ENST00000616795 COL11A1P12107 1806 aaPredicted RBP16.26■□□□□ 0.19
CCDC113-206ENST00000616795 SPDYE16A6NNV3 312 aaPredicted RBP16.26■□□□□ 0.19
CCDC113-206ENST00000616795 MYCP01106 439 aaPredicted RBP16.26■□□□□ 0.19
CCDC113-206ENST00000616795 ERVK-9P63128 1117 aa16.26■□□□□ 0.19
CCDC113-206ENST00000616795 ERVK-24P63145 666 aa16.26■□□□□ 0.19
CCDC113-206ENST00000616795 MLLT1Q03111 559 aaPredicted RBP16.26■□□□□ 0.19
CCDC113-206ENST00000616795 PPARAQ07869 468 aa16.26■□□□□ 0.19
CCDC113-206ENST00000616795 MCMDC2Q4G0Z9 681 aa16.26■□□□□ 0.19
CCDC113-206ENST00000616795 NBPF11Q86T75 865 aa16.26■□□□□ 0.19
CCDC113-206ENST00000616795 TICAM2Q86XR7 235 aa16.26■□□□□ 0.19
CCDC113-206ENST00000616795 GPRC5AQ8NFJ5 357 aa16.26■□□□□ 0.19
CCDC113-206ENST00000616795 VCPKMTQ9H867 229 aa16.26■□□□□ 0.19
CCDC113-206ENST00000616795 KANSL2Q9H9L4 492 aa16.26■□□□□ 0.19
CCDC113-206ENST00000616795 IGKV6D-41A0A0C4DH26 115 aa16.25■□□□□ 0.19
CCDC113-206ENST00000616795 SDSP20132 328 aa16.25■□□□□ 0.19
CCDC113-206ENST00000616795 GRK4P32298 578 aa16.25■□□□□ 0.19
CCDC113-206ENST00000616795 ATP2B2Q01814 1243 aa16.25■□□□□ 0.19
CCDC113-206ENST00000616795 SPICE1Q8N0Z3 855 aa16.25■□□□□ 0.19
CCDC113-206ENST00000616795 GTF3C2Q8WUA4 911 aaPredicted RBP16.25■□□□□ 0.19
CCDC113-206ENST00000616795 COA7Q96BR5 231 aa16.25■□□□□ 0.19
CCDC113-206ENST00000616795 PORCNQ9H237 461 aa16.25■□□□□ 0.19
CCDC113-206ENST00000616795 TACC3Q9Y6A5 838 aa16.25■□□□□ 0.19
CCDC113-206ENST00000616795 CTDSPL2Q05D32 466 aa16.24■□□□□ 0.19
CCDC113-206ENST00000616795 IRF5Q13568 498 aa16.24■□□□□ 0.19
CCDC113-206ENST00000616795 MTFR1Q15390 333 aa16.24■□□□□ 0.19
CCDC113-206ENST00000616795 LBX2Q6XYB7 198 aa16.24■□□□□ 0.19
CCDC113-206ENST00000616795 LPAR1Q92633 364 aa16.24■□□□□ 0.19
CCDC113-206ENST00000616795 TANGO6Q9C0B7 1094 aa16.24■□□□□ 0.19
CCDC113-206ENST00000616795 SH2D4AQ9H788 454 aa16.24■□□□□ 0.19
CCDC113-206ENST00000616795 BTBD7Q9P203 1132 aa16.24■□□□□ 0.19
CCDC113-206ENST00000616795 GJD2Q9UKL4 321 aa16.24■□□□□ 0.19
CCDC113-206ENST00000616795 RABGAP1Q9Y3P9 1069 aa16.24■□□□□ 0.19
CCDC113-206ENST00000616795 PLIN4Q96Q06 1357 aa16.24■□□□□ 0.19
CCDC113-206ENST00000616795 MKI67P46013 3256 aaKnown RBP16.23■□□□□ 0.19
CCDC113-206ENST00000616795 CCDC171Q6TFL3 1326 aa16.23■□□□□ 0.19
CCDC113-206ENST00000616795 ADCY3O60266 1144 aa16.23■□□□□ 0.19
CCDC113-206ENST00000616795 GSPT1P15170 499 aaKnown RBP16.23■□□□□ 0.19
CCDC113-206ENST00000616795 ELNP15502 786 aa16.23■□□□□ 0.19
CCDC113-206ENST00000616795 ALX1Q15699 326 aa16.23■□□□□ 0.19
CCDC113-206ENST00000616795 ZNF444Q8N0Y2 327 aaPredicted RBP16.23■□□□□ 0.19
CCDC113-206ENST00000616795 SLAIN1Q8ND83 568 aa16.23■□□□□ 0.19
CCDC113-206ENST00000616795 INCENPQ9NQS7 918 aa16.23■□□□□ 0.19
CCDC113-206ENST00000616795 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.23■□□□□ 0.19
CCDC113-206ENST00000616795 LAMA4Q16363 1823 aa16.23■□□□□ 0.19
CCDC113-206ENST00000616795 WDR46O15213 610 aaKnown RBP16.22■□□□□ 0.19
CCDC113-206ENST00000616795 HSPD1P10809 573 aaKnown RBP16.22■□□□□ 0.19
CCDC113-206ENST00000616795 EN2P19622 333 aaPredicted RBP16.22■□□□□ 0.19
CCDC113-206ENST00000616795 PDE4BQ07343 736 aa16.22■□□□□ 0.19
CCDC113-206ENST00000616795 COG2Q14746 738 aa16.22■□□□□ 0.19
CCDC113-206ENST00000616795 FAM47AQ5JRC9 791 aa16.22■□□□□ 0.19
CCDC113-206ENST00000616795 TTC22Q5TAA0 569 aa16.22■□□□□ 0.19
CCDC113-206ENST00000616795 ZNF287Q9HBT7 754 aa16.22■□□□□ 0.19
CCDC113-206ENST00000616795 NYAP2Q9P242 653 aa16.22■□□□□ 0.19
CCDC113-206ENST00000616795 ANAPC4Q9UJX5 808 aa16.22■□□□□ 0.19
CCDC113-206ENST00000616795 FGAP02671 866 aa16.21■□□□□ 0.19
CCDC113-206ENST00000616795 SLC3A2P08195 630 aaKnown RBP16.21■□□□□ 0.19
CCDC113-206ENST00000616795 MAPK4P31152 587 aa16.21■□□□□ 0.19
CCDC113-206ENST00000616795 DSG3P32926 999 aa16.21■□□□□ 0.19
CCDC113-206ENST00000616795 CWC27Q6UX04 472 aaKnown RBP16.21■□□□□ 0.19
CCDC113-206ENST00000616795 GPR142Q7Z601 462 aa16.21■□□□□ 0.19
CCDC113-206ENST00000616795 NEDD1Q8NHV4 660 aa16.21■□□□□ 0.19
CCDC113-206ENST00000616795 PXYLP1Q8TE99 480 aa16.21■□□□□ 0.19
CCDC113-206ENST00000616795 CEP95Q96GE4 821 aa16.21■□□□□ 0.19
CCDC113-206ENST00000616795 TMEM106CQ9BVX2 250 aa16.21■□□□□ 0.19
CCDC113-206ENST00000616795 GOPCQ9HD26 462 aa16.21■□□□□ 0.19
CCDC113-206ENST00000616795 FLOT1O75955 427 aa16.2■□□□□ 0.18
CCDC113-206ENST00000616795 INHAP05111 366 aa16.2■□□□□ 0.18
CCDC113-206ENST00000616795 TSPY3P0CV98 308 aa16.2■□□□□ 0.18
CCDC113-206ENST00000616795 TSPY8P0CW00 308 aa16.2■□□□□ 0.18
CCDC113-206ENST00000616795 TFAP4Q01664 338 aa16.2■□□□□ 0.18
CCDC113-206ENST00000616795 FAM83BQ5T0W9 1011 aa16.2■□□□□ 0.18
CCDC113-206ENST00000616795 ATG4CQ96DT6 458 aa16.2■□□□□ 0.18
CCDC113-206ENST00000616795 DIAPH3Q9NSV4 1193 aa16.2■□□□□ 0.18
CCDC113-206ENST00000616795 FBXO28Q9NVF7 368 aa16.2■□□□□ 0.18
CCDC113-206ENST00000616795 MTMR4Q9NYA4 1195 aa16.2■□□□□ 0.18
CCDC113-206ENST00000616795 HOXC10Q9NYD6 342 aa16.2■□□□□ 0.18
CCDC113-206ENST00000616795 BIN2Q9UBW5 565 aaPredicted RBP16.2■□□□□ 0.18
CCDC113-206ENST00000616795 CLIP2Q9UDT6 1046 aa16.2■□□□□ 0.18
CCDC113-206ENST00000616795 ZMYM6O95789 1325 aa16.19■□□□□ 0.18
CCDC113-206ENST00000616795 RAD21O60216 631 aa16.19■□□□□ 0.18
CCDC113-206ENST00000616795 NDUFB10O96000 172 aa16.19■□□□□ 0.18
CCDC113-206ENST00000616795 CCL5P13501 91 aa16.19■□□□□ 0.18
CCDC113-206ENST00000616795 CYP2B6P20813 491 aa16.19■□□□□ 0.18
CCDC113-206ENST00000616795 MORN1Q5T089 497 aa16.19■□□□□ 0.18
CCDC113-206ENST00000616795 PLEKHH3Q7Z736 793 aa16.19■□□□□ 0.18
CCDC113-206ENST00000616795 USP6NLQ92738 828 aa16.19■□□□□ 0.18
CCDC113-206ENST00000616795 NUP88Q99567 741 aaPredicted RBP16.19■□□□□ 0.18
CCDC113-206ENST00000616795 UNC93B1Q9H1C4 597 aa16.19■□□□□ 0.18
CCDC113-206ENST00000616795 IL25Q9H293 177 aa16.19■□□□□ 0.18
CCDC113-206ENST00000616795 PDE4DIPQ5VU43 2346 aa16.19■□□□□ 0.18
CCDC113-206ENST00000616795 ZNFX1Q9P2E3 1918 aaKnown RBP16.19■□□□□ 0.18
CCDC113-206ENST00000616795 ZNF236Q9UL36 1845 aa16.18■□□□□ 0.18
CCDC113-206ENST00000616795 F5H6K3 240 aa16.18■□□□□ 0.18
CCDC113-206ENST00000616795 HIP1O00291 1037 aa16.18■□□□□ 0.18
CCDC113-206ENST00000616795 FGRP09769 529 aa16.18■□□□□ 0.18
CCDC113-206ENST00000616795 HAND2P61296 217 aa16.18■□□□□ 0.18
CCDC113-206ENST00000616795 UBXN2AP68543 259 aa16.18■□□□□ 0.18
CCDC113-206ENST00000616795 CCNA1P78396 465 aa16.18■□□□□ 0.18
CCDC113-206ENST00000616795 KLRC3Q07444 240 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms