RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 CYR61O00622 381 aa4.73□□□□□ -1.65
HMGB1P24-202ENST00000615653 NME2P22392 152 aa4.73□□□□□ -1.65
HMGB1P24-202ENST00000615653 CYP7A1P22680 504 aa4.73□□□□□ -1.65
HMGB1P24-202ENST00000615653 TPP2P29144 1249 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P24-202ENST00000615653 GDF5P43026 501 aa4.73□□□□□ -1.65
HMGB1P24-202ENST00000615653 GRM2Q14416 872 aa4.73□□□□□ -1.65
HMGB1P24-202ENST00000615653 UBXN11Q5T124 520 aa4.73□□□□□ -1.65
HMGB1P24-202ENST00000615653 LETMD1Q6P1Q0 360 aa4.73□□□□□ -1.65
HMGB1P24-202ENST00000615653 MPRIPQ6WCQ1 1025 aa4.73□□□□□ -1.65
HMGB1P24-202ENST00000615653 SRCIN1Q9C0H9 1055 aa4.73□□□□□ -1.65
HMGB1P24-202ENST00000615653 DUSP15Q9H1R2 295 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P24-202ENST00000615653 PPP4R2Q9NY27 417 aa4.73□□□□□ -1.65
HMGB1P24-202ENST00000615653 PDIA4P13667 645 aaKnown RBP4.72□□□□□ -1.65
HMGB1P24-202ENST00000615653 KCNC1P48547 511 aa4.72□□□□□ -1.65
HMGB1P24-202ENST00000615653 CAP1Q01518 475 aa4.72□□□□□ -1.65
HMGB1P24-202ENST00000615653 ATP2B2Q01814 1243 aa4.72□□□□□ -1.65
HMGB1P24-202ENST00000615653 CHRNEQ04844 493 aa4.72□□□□□ -1.65
HMGB1P24-202ENST00000615653 EGR3Q06889 387 aa4.72□□□□□ -1.65
HMGB1P24-202ENST00000615653 CPZQ66K79 652 aa4.72□□□□□ -1.65
HMGB1P24-202ENST00000615653 ALG1LQ6GMV1 187 aa4.72□□□□□ -1.65
HMGB1P24-202ENST00000615653 EPS8L3Q8TE67 593 aaKnown RBP4.72□□□□□ -1.65
HMGB1P24-202ENST00000615653 MZB1Q8WU39 189 aa4.72□□□□□ -1.65
HMGB1P24-202ENST00000615653 NECAB3Q96P71 396 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P24-202ENST00000615653 C1QTNF3Q9BXJ4 246 aa4.72□□□□□ -1.65
HMGB1P24-202ENST00000615653 KRTAP3-1Q9BYR8 98 aa4.72□□□□□ -1.65
HMGB1P24-202ENST00000615653 FBRSQ9HAH7 460 aa4.72□□□□□ -1.65
HMGB1P24-202ENST00000615653 SMPD4Q9NXE4 827 aa4.72□□□□□ -1.65
HMGB1P24-202ENST00000615653 GIPC1O14908 333 aa4.71□□□□□ -1.66
HMGB1P24-202ENST00000615653 C6P13671 934 aa4.71□□□□□ -1.66
HMGB1P24-202ENST00000615653 VIPR1P32241 457 aa4.71□□□□□ -1.66
HMGB1P24-202ENST00000615653 ACVRL1P37023 503 aa4.71□□□□□ -1.66
HMGB1P24-202ENST00000615653 DTHD1Q6ZMT9 781 aa4.71□□□□□ -1.66
HMGB1P24-202ENST00000615653 DUSP13Q9UII6 198 aa4.71□□□□□ -1.66
HMGB1P24-202ENST00000615653 TACR2P21452 398 aa4.7□□□□□ -1.66
HMGB1P24-202ENST00000615653 MAPK8P45983 427 aa4.7□□□□□ -1.66
HMGB1P24-202ENST00000615653 GALK1P51570 392 aa4.7□□□□□ -1.66
HMGB1P24-202ENST00000615653 CDR1P51861 262 aa4.7□□□□□ -1.66
HMGB1P24-202ENST00000615653 SLURP1P55000 103 aa4.7□□□□□ -1.66
HMGB1P24-202ENST00000615653 YBX1P67809 324 aaKnown RBP4.7□□□□□ -1.66
HMGB1P24-202ENST00000615653 ADGRF1Q5T601 910 aa4.7□□□□□ -1.66
HMGB1P24-202ENST00000615653 SND1Q7KZF4 910 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB1P24-202ENST00000615653 Q8N1X5 172 aa4.7□□□□□ -1.66
HMGB1P24-202ENST00000615653 ANKS4BQ8N8V4 417 aa4.7□□□□□ -1.66
HMGB1P24-202ENST00000615653 PWWP2AQ96N64 755 aa4.7□□□□□ -1.66
HMGB1P24-202ENST00000615653 FRMD6Q96NE9 622 aa4.7□□□□□ -1.66
HMGB1P24-202ENST00000615653 BCO2Q9BYV7 579 aa4.7□□□□□ -1.66
HMGB1P24-202ENST00000615653 TRIT1Q9H3H1 467 aaKnown RBP4.7□□□□□ -1.66
HMGB1P24-202ENST00000615653 PPM1HQ9ULR3 514 aa4.7□□□□□ -1.66
HMGB1P24-202ENST00000615653 FFAR3O14843 346 aa4.69□□□□□ -1.66
HMGB1P24-202ENST00000615653 TRIM37O94972 964 aa4.69□□□□□ -1.66
HMGB1P24-202ENST00000615653 TGM1P22735 817 aa4.69□□□□□ -1.66
HMGB1P24-202ENST00000615653 GSTT1P30711 240 aa4.69□□□□□ -1.66
HMGB1P24-202ENST00000615653 FCGRTP55899 365 aa4.69□□□□□ -1.66
HMGB1P24-202ENST00000615653 NKG7Q16617 165 aa4.69□□□□□ -1.66
HMGB1P24-202ENST00000615653 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.69□□□□□ -1.66
HMGB1P24-202ENST00000615653 NLRX1Q86UT6 975 aa4.69□□□□□ -1.66
HMGB1P24-202ENST00000615653 IGDCC3Q8IVU1 814 aa4.69□□□□□ -1.66
HMGB1P24-202ENST00000615653 ANKRD24Q8TF21 1146 aa4.69□□□□□ -1.66
HMGB1P24-202ENST00000615653 EBF1Q9UH73 591 aa4.69□□□□□ -1.66
HMGB1P24-202ENST00000615653 SPG7Q9UQ90 795 aa4.69□□□□□ -1.66
HMGB1P24-202ENST00000615653 NOTOA8MTQ0 251 aa4.68□□□□□ -1.66
HMGB1P24-202ENST00000615653 ITGB3P05106 788 aa4.68□□□□□ -1.66
HMGB1P24-202ENST00000615653 PI16Q6UXB8 463 aa4.68□□□□□ -1.66
HMGB1P24-202ENST00000615653 FERMT3Q86UX7 667 aa4.68□□□□□ -1.66
HMGB1P24-202ENST00000615653 ZFPM1Q8IX07 1006 aa4.68□□□□□ -1.66
HMGB1P24-202ENST00000615653 GRIN3AQ8TCU5 1115 aa4.68□□□□□ -1.66
HMGB1P24-202ENST00000615653 Q96M66 194 aa4.68□□□□□ -1.66
HMGB1P24-202ENST00000615653 CBX8Q9HC52 389 aa4.68□□□□□ -1.66
HMGB1P24-202ENST00000615653 ZNF20P17024 532 aa4.67□□□□□ -1.66
HMGB1P24-202ENST00000615653 DUSP4Q13115 394 aa4.67□□□□□ -1.66
HMGB1P24-202ENST00000615653 NXPE4Q6UWF7 544 aa4.67□□□□□ -1.66
HMGB1P24-202ENST00000615653 CDH24Q86UP0 819 aa4.67□□□□□ -1.66
HMGB1P24-202ENST00000615653 TSPYL5Q86VY4 417 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P24-202ENST00000615653 SIRT2Q8IXJ6 389 aa4.67□□□□□ -1.66
HMGB1P24-202ENST00000615653 LINC01599Q8WXQ3 324 aa4.67□□□□□ -1.66
HMGB1P24-202ENST00000615653 SYTL4Q96C24 671 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P24-202ENST00000615653 RBM15Q96T37 977 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB1P24-202ENST00000615653 GPR62Q9BZJ7 368 aa4.67□□□□□ -1.66
HMGB1P24-202ENST00000615653 CEP44Q9C0F1 390 aa4.67□□□□□ -1.66
HMGB1P24-202ENST00000615653 PRPF40AO75400 957 aaKnown RBP4.66□□□□□ -1.66
HMGB1P24-202ENST00000615653 EFEMP2O95967 443 aa4.66□□□□□ -1.66
HMGB1P24-202ENST00000615653 CST3P01034 146 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P24-202ENST00000615653 P4HBP07237 508 aaKnown RBP4.66□□□□□ -1.66
HMGB1P24-202ENST00000615653 BMP6P22004 513 aa4.66□□□□□ -1.66
HMGB1P24-202ENST00000615653 LDHDQ86WU2 507 aa4.66□□□□□ -1.66
HMGB1P24-202ENST00000615653 AEBP1Q8IUX7 1158 aa4.66□□□□□ -1.66
HMGB1P24-202ENST00000615653 C3orf58Q8NDZ4 430 aa4.66□□□□□ -1.66
HMGB1P24-202ENST00000615653 WNT10AQ9GZT5 417 aa4.66□□□□□ -1.66
HMGB1P24-202ENST00000615653 C12orf49Q9H741 205 aa4.66□□□□□ -1.66
HMGB1P24-202ENST00000615653 CRTAC1Q9NQ79 661 aa4.66□□□□□ -1.66
HMGB1P24-202ENST00000615653 GPATCH2Q9NW75 528 aa4.66□□□□□ -1.66
HMGB1P24-202ENST00000615653 FAM8A1Q9UBU6 413 aa4.66□□□□□ -1.66
HMGB1P24-202ENST00000615653 PCDHA4Q9UN74 947 aa4.66□□□□□ -1.66
HMGB1P24-202ENST00000615653 SAMM50Q9Y512 469 aa4.66□□□□□ -1.66
HMGB1P24-202ENST00000615653 PCDHA11Q9Y5I1 949 aa4.66□□□□□ -1.66
HMGB1P24-202ENST00000615653 ABLIM1O14639 778 aa4.65□□□□□ -1.67
HMGB1P24-202ENST00000615653 LDHBP07195 334 aaKnown RBP4.65□□□□□ -1.67
HMGB1P24-202ENST00000615653 OLFML2BQ68BL8 750 aa4.65□□□□□ -1.67
HMGB1P24-202ENST00000615653 SCARA3Q6AZY7 606 aa4.65□□□□□ -1.67
HMGB1P24-202ENST00000615653 CRIP3Q6Q6R5 217 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms