RNA–Protein interactions for RNA: ENST00000614478.1

GEN1-208, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

Gene GEN1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-208ENST00000614478 ZSCAN29Q8IWY8 852 aaPredicted RBP20.5■□□□□ 0.87
GEN1-208ENST00000614478 SRBD1Q8N5C6 995 aaKnown RBP20.5■□□□□ 0.87
GEN1-208ENST00000614478 MYOZ2Q9NPC6 264 aa20.5■□□□□ 0.87
GEN1-208ENST00000614478 ADARB2Q9NS39 739 aaKnown RBP20.5■□□□□ 0.87
GEN1-208ENST00000614478 RBM27Q9P2N5 1060 aaKnown RBP20.5■□□□□ 0.87
GEN1-208ENST00000614478 PI4KBQ9UBF8 816 aa20.5■□□□□ 0.87
GEN1-208ENST00000614478 PLIN4Q96Q06 1357 aa20.49■□□□□ 0.87
GEN1-208ENST00000614478 GPBP1L1Q9HC44 474 aaPredicted RBP20.49■□□□□ 0.87
GEN1-208ENST00000614478 V9GY48 417 aaPredicted RBP20.49■□□□□ 0.87
GEN1-208ENST00000614478 ENTPD3O75355 529 aa20.48■□□□□ 0.87
GEN1-208ENST00000614478 EPHX2P34913 555 aa20.48■□□□□ 0.87
GEN1-208ENST00000614478 NOVP48745 357 aa20.48■□□□□ 0.87
GEN1-208ENST00000614478 GRM4Q14833 912 aa20.48■□□□□ 0.87
GEN1-208ENST00000614478 ZSCAN23Q3MJ62 389 aa20.48■□□□□ 0.87
GEN1-208ENST00000614478 RRAGCQ9HB90 399 aa20.48■□□□□ 0.87
GEN1-208ENST00000614478 NMRK2Q9NPI5 230 aa20.48■□□□□ 0.87
GEN1-208ENST00000614478 SIPA1L1O43166 1804 aa20.48■□□□□ 0.87
GEN1-208ENST00000614478 SLURP2P0DP57 97 aa20.47■□□□□ 0.87
GEN1-208ENST00000614478 TOP1P11387 765 aaKnown RBP20.47■□□□□ 0.87
GEN1-208ENST00000614478 CEBPZQ03701 1054 aaKnown RBP20.47■□□□□ 0.87
GEN1-208ENST00000614478 PKN1Q16512 942 aa20.47■□□□□ 0.87
GEN1-208ENST00000614478 MTMR14Q8NCE2 650 aa20.47■□□□□ 0.87
GEN1-208ENST00000614478 USP28Q96RU2 1077 aa20.47■□□□□ 0.87
GEN1-208ENST00000614478 TAF1DQ9H5J8 278 aaPredicted RBP20.47■□□□□ 0.87
GEN1-208ENST00000614478 TMOD2Q9NZR1 351 aa20.47■□□□□ 0.87
GEN1-208ENST00000614478 POLR2AP24928 1970 aaKnown RBP20.47■□□□□ 0.87
GEN1-208ENST00000614478 CNTNAP5Q8WYK1 1306 aa20.47■□□□□ 0.87
GEN1-208ENST00000614478 hCG_1642624A0A1W2PR95 340 aa20.47■□□□□ 0.87
GEN1-208ENST00000614478 SAMD7Q7Z3H4 446 aa20.47■□□□□ 0.87
GEN1-208ENST00000614478 STAG2Q8N3U4 1231 aa20.47■□□□□ 0.87
GEN1-208ENST00000614478 FTOQ9C0B1 505 aaKnown RBP eCLIP20.47■□□□□ 0.87
GEN1-208ENST00000614478 DNAJC18Q9H819 358 aa20.47■□□□□ 0.87
GEN1-208ENST00000614478 GRPEL1Q9HAV7 217 aa20.47■□□□□ 0.87
GEN1-208ENST00000614478 MTMR4Q9NYA4 1195 aa20.47■□□□□ 0.87
GEN1-208ENST00000614478 TMEM63CQ9P1W3 806 aa20.47■□□□□ 0.87
GEN1-208ENST00000614478 MAD2L2Q9UI95 211 aa20.47■□□□□ 0.87
GEN1-208ENST00000614478 MTMR7Q9Y216 660 aa20.47■□□□□ 0.87
GEN1-208ENST00000614478 IGKV6D-41A0A0C4DH26 115 aa20.46■□□□□ 0.87
GEN1-208ENST00000614478 CLRN2A0PK11 232 aa20.46■□□□□ 0.87
GEN1-208ENST00000614478 MMP1P03956 469 aa20.46■□□□□ 0.87
GEN1-208ENST00000614478 GNL2Q13823 731 aaKnown RBP20.46■□□□□ 0.87
GEN1-208ENST00000614478 KIF4BQ2VIQ3 1234 aa20.46■□□□□ 0.87
GEN1-208ENST00000614478 MYSM1Q5VVJ2 828 aa20.46■□□□□ 0.87
GEN1-208ENST00000614478 USP50Q70EL3 339 aaPredicted RBP20.46■□□□□ 0.87
GEN1-208ENST00000614478 PNMA8AQ86V59 439 aaPredicted RBP20.46■□□□□ 0.87
GEN1-208ENST00000614478 FOXP4Q8IVH2 680 aaPredicted RBP20.46■□□□□ 0.87
GEN1-208ENST00000614478 ZNF70Q9UC06 446 aaPredicted RBP20.46■□□□□ 0.87
GEN1-208ENST00000614478 KCNJ14Q9UNX9 436 aa20.46■□□□□ 0.87
GEN1-208ENST00000614478 ATRNL1Q5VV63 1379 aa20.45■□□□□ 0.87
GEN1-208ENST00000614478 GNAQP50148 359 aa20.45■□□□□ 0.86
GEN1-208ENST00000614478 TBC1D10BQ4KMP7 808 aaPredicted RBP20.45■□□□□ 0.86
GEN1-208ENST00000614478 CCDC17Q96LX7 622 aa20.45■□□□□ 0.86
GEN1-208ENST00000614478 TRIM34Q9BYJ4 488 aa20.45■□□□□ 0.86
GEN1-208ENST00000614478 RCOR1Q9UKL0 485 aa20.45■□□□□ 0.86
GEN1-208ENST00000614478 FAM196BA6NMK8 535 aa20.45■□□□□ 0.86
GEN1-208ENST00000614478 TCP10L2B9ZVM9 353 aa20.45■□□□□ 0.86
GEN1-208ENST00000614478 EGFRP00533 1210 aa20.45■□□□□ 0.86
GEN1-208ENST00000614478 U2AF2P26368 475 aaKnown RBP eCLIP20.45■□□□□ 0.86
GEN1-208ENST00000614478 SAFBQ15424 915 aaKnown RBP eCLIP20.45■□□□□ 0.86
GEN1-208ENST00000614478 MPHOSPH10O00566 681 aaKnown RBP20.44■□□□□ 0.86
GEN1-208ENST00000614478 XRCC6P12956 609 aaKnown RBP eCLIP20.44■□□□□ 0.86
GEN1-208ENST00000614478 XBP1P17861 261 aa20.44■□□□□ 0.86
GEN1-208ENST00000614478 SPDYE2Q495Y8 402 aa20.44■□□□□ 0.86
GEN1-208ENST00000614478 RBM26Q5T8P6 1007 aaKnown RBP20.44■□□□□ 0.86
GEN1-208ENST00000614478 ZNF784Q8NCA9 323 aaPredicted RBP20.44■□□□□ 0.86
GEN1-208ENST00000614478 TRPM4Q8TD43 1214 aa20.44■□□□□ 0.86
GEN1-208ENST00000614478 ZBED3Q96IU2 234 aaPredicted RBP20.44■□□□□ 0.86
GEN1-208ENST00000614478 COL2A1P02458 1487 aaPredicted RBP20.44■□□□□ 0.86
GEN1-208ENST00000614478 BAZ2BQ9UIF8 2168 aaKnown RBP20.44■□□□□ 0.86
GEN1-208ENST00000614478 PALM3A6NDB9 673 aaPredicted RBP20.43■□□□□ 0.86
GEN1-208ENST00000614478 GOLGA6L4A6NEF3 574 aa20.43■□□□□ 0.86
GEN1-208ENST00000614478 WNT10BO00744 389 aa20.43■□□□□ 0.86
GEN1-208ENST00000614478 GAS2L3Q86XJ1 694 aa20.43■□□□□ 0.86
GEN1-208ENST00000614478 RTEL1Q9NZ71 1219 aa20.43■□□□□ 0.86
GEN1-208ENST00000614478 VPS54Q9P1Q0 977 aa20.43■□□□□ 0.86
GEN1-208ENST00000614478 BTBD18B2RXH4 712 aa20.43■□□□□ 0.86
GEN1-208ENST00000614478 LETM1O95202 739 aaPredicted RBP20.43■□□□□ 0.86
GEN1-208ENST00000614478 TTLL1O95922 423 aa20.43■□□□□ 0.86
GEN1-208ENST00000614478 CERKLQ49MI3 558 aaPredicted RBP20.43■□□□□ 0.86
GEN1-208ENST00000614478 METTL16Q86W50 562 aaKnown RBP20.43■□□□□ 0.86
GEN1-208ENST00000614478 DIS3L2Q8IYB7 885 aaKnown RBP20.43■□□□□ 0.86
GEN1-208ENST00000614478 SHISA4Q96DD7 197 aa20.43■□□□□ 0.86
GEN1-208ENST00000614478 PGBD1Q96JS3 809 aa20.43■□□□□ 0.86
GEN1-208ENST00000614478 PARP1P09874 1014 aaKnown RBP20.42■□□□□ 0.86
GEN1-208ENST00000614478 HIRAP54198 1017 aaPredicted RBP20.42■□□□□ 0.86
GEN1-208ENST00000614478 TATDN1Q6P1N9 297 aa20.42■□□□□ 0.86
GEN1-208ENST00000614478 CLEC10AQ8IUN9 316 aa20.42■□□□□ 0.86
GEN1-208ENST00000614478 FAM151AQ8WW52 585 aa20.42■□□□□ 0.86
GEN1-208ENST00000614478 PIBF1Q8WXW3 757 aa20.42■□□□□ 0.86
GEN1-208ENST00000614478 CSRNP1Q96S65 589 aa20.42■□□□□ 0.86
GEN1-208ENST00000614478 LZTS2Q9BRK4 669 aa20.42■□□□□ 0.86
GEN1-208ENST00000614478 CLIP2Q9UDT6 1046 aa20.42■□□□□ 0.86
GEN1-208ENST00000614478 CLIC4Q9Y696 253 aa20.42■□□□□ 0.86
GEN1-208ENST00000614478 GREB1LQ9C091 1923 aaPredicted RBP20.42■□□□□ 0.86
GEN1-208ENST00000614478 MYO1BO43795 1136 aa20.41■□□□□ 0.86
GEN1-208ENST00000614478 GOLGA8HP0CJ92 632 aa20.41■□□□□ 0.86
GEN1-208ENST00000614478 SCG2P13521 617 aa20.41■□□□□ 0.86
GEN1-208ENST00000614478 PFKFB3Q16875 520 aaPredicted RBP20.41■□□□□ 0.86
GEN1-208ENST00000614478 NBPF9Q3BBW0 867 aa20.41■□□□□ 0.86
GEN1-208ENST00000614478 LRSAM1Q6UWE0 723 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms