RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 FAAP100Q0VG06 881 aa12.69□□□□□ -0.38
SSX3-204ENST00000612497 MVPQ14764 893 aaKnown RBP12.69□□□□□ -0.38
SSX3-204ENST00000612497 CCDC174Q6PII3 467 aa12.69□□□□□ -0.38
SSX3-204ENST00000612497 LBX2Q6XYB7 198 aa12.69□□□□□ -0.38
SSX3-204ENST00000612497 RNF180Q86T96 592 aa12.69□□□□□ -0.38
SSX3-204ENST00000612497 ALYREFQ86V81 257 aaKnown RBP12.69□□□□□ -0.38
SSX3-204ENST00000612497 MICALL1Q8N3F8 863 aa12.69□□□□□ -0.38
SSX3-204ENST00000612497 TGFBRAP1Q8WUH2 860 aa12.69□□□□□ -0.38
SSX3-204ENST00000612497 XAGE2Q96GT9 111 aa12.69□□□□□ -0.38
SSX3-204ENST00000612497 SLC5A4Q9NY91 659 aa12.69□□□□□ -0.38
SSX3-204ENST00000612497 PA2G4Q9UQ80 394 aaKnown RBP12.69□□□□□ -0.38
SSX3-204ENST00000612497 GBF1Q92538 1859 aa12.69□□□□□ -0.38
SSX3-204ENST00000612497 ZNF236Q9UL36 1845 aa12.68□□□□□ -0.38
SSX3-204ENST00000612497 A0A1B0GUL7 405 aa12.68□□□□□ -0.38
SSX3-204ENST00000612497 A0A1W2PQ45 241 aaPredicted RBP12.68□□□□□ -0.38
SSX3-204ENST00000612497 A0A1W2PQY0 241 aa12.68□□□□□ -0.38
SSX3-204ENST00000612497 SPDYE16A6NNV3 312 aaPredicted RBP12.68□□□□□ -0.38
SSX3-204ENST00000612497 COBLO75128 1261 aa12.68□□□□□ -0.38
SSX3-204ENST00000612497 BAG3O95817 575 aa12.68□□□□□ -0.38
SSX3-204ENST00000612497 PGK1P00558 417 aa12.68□□□□□ -0.38
SSX3-204ENST00000612497 VCAM1P19320 739 aa12.68□□□□□ -0.38
SSX3-204ENST00000612497 KCNQ1P51787 676 aa12.68□□□□□ -0.38
SSX3-204ENST00000612497 USP14P54578 494 aa12.68□□□□□ -0.38
SSX3-204ENST00000612497 PPIGQ13427 754 aaKnown RBP eCLIP12.68□□□□□ -0.38
SSX3-204ENST00000612497 TMEM240Q5SV17 173 aa12.68□□□□□ -0.38
SSX3-204ENST00000612497 PI16Q6UXB8 463 aa12.68□□□□□ -0.38
SSX3-204ENST00000612497 METTL16Q86W50 562 aaKnown RBP12.68□□□□□ -0.38
SSX3-204ENST00000612497 SPATA5Q8NB90 893 aa12.68□□□□□ -0.38
SSX3-204ENST00000612497 TOX2Q96NM4 488 aa12.68□□□□□ -0.38
SSX3-204ENST00000612497 MOV10L1Q9BXT6 1211 aaKnown RBP12.68□□□□□ -0.38
SSX3-204ENST00000612497 AATFQ9NY61 560 aaKnown RBP eCLIP12.68□□□□□ -0.38
SSX3-204ENST00000612497 HMG20BQ9P0W2 317 aa12.68□□□□□ -0.38
SSX3-204ENST00000612497 LRP2BPQ9P2M1 347 aa12.68□□□□□ -0.38
SSX3-204ENST00000612497 SAP30BPQ9UHR5 308 aaKnown RBP12.68□□□□□ -0.38
SSX3-204ENST00000612497 HLA-DOAP06340 250 aa12.67□□□□□ -0.38
SSX3-204ENST00000612497 PLCG2P16885 1265 aa12.67□□□□□ -0.38
SSX3-204ENST00000612497 RAB3GAP1Q15042 981 aa12.67□□□□□ -0.38
SSX3-204ENST00000612497 SKIV2LQ15477 1246 aaKnown RBP12.67□□□□□ -0.38
SSX3-204ENST00000612497 RAB30Q15771 203 aa12.67□□□□□ -0.38
SSX3-204ENST00000612497 CCDC184Q52MB2 194 aa12.67□□□□□ -0.38
SSX3-204ENST00000612497 MFSD5Q6N075 450 aa12.67□□□□□ -0.38
SSX3-204ENST00000612497 ATF7IPQ6VMQ6 1270 aa12.67□□□□□ -0.38
SSX3-204ENST00000612497 C16orf59Q7L2K0 433 aa12.67□□□□□ -0.38
SSX3-204ENST00000612497 ANKRD33Q7Z3H0 272 aa12.67□□□□□ -0.38
SSX3-204ENST00000612497 NKX2-4Q9H2Z4 354 aa12.67□□□□□ -0.38
SSX3-204ENST00000612497 RPAP3Q9H6T3 665 aaPredicted RBP12.67□□□□□ -0.38
SSX3-204ENST00000612497 SLC28A3Q9HAS3 691 aa12.67□□□□□ -0.38
SSX3-204ENST00000612497 FOCADQ5VW36 1801 aa12.67□□□□□ -0.38
SSX3-204ENST00000612497 PTPRCP08575 1304 aa12.66□□□□□ -0.38
SSX3-204ENST00000612497 FLT1P17948 1338 aa12.66□□□□□ -0.38
SSX3-204ENST00000612497 ACRP10323 421 aa12.66□□□□□ -0.38
SSX3-204ENST00000612497 ERCC3P19447 782 aa12.66□□□□□ -0.38
SSX3-204ENST00000612497 GORABQ5T7V8 394 aa12.66□□□□□ -0.38
SSX3-204ENST00000612497 RASIP1Q5U651 963 aa12.66□□□□□ -0.38
SSX3-204ENST00000612497 MRPL50Q8N5N7 158 aaKnown RBP12.66□□□□□ -0.38
SSX3-204ENST00000612497 ACER1Q8TDN7 264 aa12.66□□□□□ -0.38
SSX3-204ENST00000612497 MAML3Q96JK9 1138 aa12.66□□□□□ -0.38
SSX3-204ENST00000612497 NEUROD6Q96NK8 337 aa12.66□□□□□ -0.38
SSX3-204ENST00000612497 KIAA1683Q9H0B3 1180 aa12.66□□□□□ -0.38
SSX3-204ENST00000612497 STARD7Q9NQZ5 370 aa12.66□□□□□ -0.38
SSX3-204ENST00000612497 AKAP2Q9Y2D5 859 aa12.66□□□□□ -0.38
SSX3-204ENST00000612497 MYH1P12882 1939 aa12.65□□□□□ -0.38
SSX3-204ENST00000612497 APBB1O00213 710 aa12.65□□□□□ -0.38
SSX3-204ENST00000612497 UBTFL1P0CB47 393 aaPredicted RBP12.65□□□□□ -0.38
SSX3-204ENST00000612497 CSF2RAP15509 400 aa12.65□□□□□ -0.38
SSX3-204ENST00000612497 PLS1Q14651 629 aa12.65□□□□□ -0.38
SSX3-204ENST00000612497 NAA16Q6N069 864 aaPredicted RBP12.65□□□□□ -0.38
SSX3-204ENST00000612497 ZNF365Q70YC5 407 aa12.65□□□□□ -0.38
SSX3-204ENST00000612497 NCAPG2Q86XI2 1143 aa12.65□□□□□ -0.38
SSX3-204ENST00000612497 TMEM199Q8N511 208 aa12.65□□□□□ -0.38
SSX3-204ENST00000612497 NUP133Q8WUM0 1156 aa12.65□□□□□ -0.38
SSX3-204ENST00000612497 SPATC1LQ9H0A9 340 aa12.65□□□□□ -0.38
SSX3-204ENST00000612497 TBX21Q9UL17 535 aa12.65□□□□□ -0.38
SSX3-204ENST00000612497 PRRC2BQ5JSZ5 2229 aaKnown RBP12.65□□□□□ -0.38
SSX3-204ENST00000612497 FAM86C2PA6NEL3 165 aa12.64□□□□□ -0.39
SSX3-204ENST00000612497 ACLYP53396 1101 aa12.64□□□□□ -0.39
SSX3-204ENST00000612497 TFCP2Q12800 502 aa12.64□□□□□ -0.39
SSX3-204ENST00000612497 COG2Q14746 738 aa12.64□□□□□ -0.39
SSX3-204ENST00000612497 PSRC1Q6PGN9 363 aaPredicted RBP12.64□□□□□ -0.39
SSX3-204ENST00000612497 SHCBP1Q8NEM2 672 aa12.64□□□□□ -0.39
SSX3-204ENST00000612497 HERVK_113Q902F9 699 aa12.64□□□□□ -0.39
SSX3-204ENST00000612497 SNX27Q96L92 541 aa12.64□□□□□ -0.39
SSX3-204ENST00000612497 MROH8Q9H579 483 aa12.64□□□□□ -0.39
SSX3-204ENST00000612497 COPRSQ9NQ92 184 aa12.64□□□□□ -0.39
SSX3-204ENST00000612497 HOXC10Q9NYD6 342 aa12.64□□□□□ -0.39
SSX3-204ENST00000612497 NRBP1Q9UHY1 535 aa12.64□□□□□ -0.39
SSX3-204ENST00000612497 ERC2O15083 957 aa12.63□□□□□ -0.39
SSX3-204ENST00000612497 GPR37L1O60883 481 aa12.63□□□□□ -0.39
SSX3-204ENST00000612497 FCER1AP12319 257 aa12.63□□□□□ -0.39
SSX3-204ENST00000612497 PPP4CP60510 307 aa12.63□□□□□ -0.39
SSX3-204ENST00000612497 ABCB5Q2M3G0 1257 aa12.63□□□□□ -0.39
SSX3-204ENST00000612497 ABRAQ8N0Z2 381 aa12.63□□□□□ -0.39
SSX3-204ENST00000612497 LENG1Q96BZ8 264 aaPredicted RBP12.63□□□□□ -0.39
SSX3-204ENST00000612497 TSEN34Q9BSV6 310 aaKnown RBP12.63□□□□□ -0.39
SSX3-204ENST00000612497 PPP1R12CQ9BZL4 782 aa12.63□□□□□ -0.39
SSX3-204ENST00000612497 TANGO6Q9C0B7 1094 aa12.63□□□□□ -0.39
SSX3-204ENST00000612497 YBX2Q9Y2T7 364 aaKnown RBP12.63□□□□□ -0.39
SSX3-204ENST00000612497 TRANK1O15050 2925 aa12.63□□□□□ -0.39
SSX3-204ENST00000612497 MROH7Q68CQ1 1323 aa12.62□□□□□ -0.39
SSX3-204ENST00000612497 TAL1P17542 331 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms