RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 CHADLQ6NUI6 762 aa22.78■■□□□ 1.24
SRRM3-205ENST00000612155 TATDN1Q6P1N9 297 aa22.78■■□□□ 1.24
SRRM3-205ENST00000612155 IGDCC4Q8TDY8 1250 aa22.78■■□□□ 1.24
SRRM3-205ENST00000612155 ESR2Q92731 530 aa22.78■■□□□ 1.24
SRRM3-205ENST00000612155 ZKSCAN4Q969J2 545 aaPredicted RBP22.78■■□□□ 1.24
SRRM3-205ENST00000612155 CHMP4CQ96CF2 233 aa22.78■■□□□ 1.24
SRRM3-205ENST00000612155 CNNM2Q9H8M5 875 aa22.78■■□□□ 1.24
SRRM3-205ENST00000612155 SWAP70Q9UH65 585 aa22.78■■□□□ 1.24
SRRM3-205ENST00000612155 TSPY3P0CV98 308 aa22.77■■□□□ 1.24
SRRM3-205ENST00000612155 TSPY8P0CW00 308 aa22.77■■□□□ 1.24
SRRM3-205ENST00000612155 SPATA32Q96LK8 384 aa22.77■■□□□ 1.24
SRRM3-205ENST00000612155 SCAND2PQ9GZW5 306 aaPredicted RBP22.77■■□□□ 1.24
SRRM3-205ENST00000612155 ZSCAN16Q9H4T2 348 aaPredicted RBP22.77■■□□□ 1.24
SRRM3-205ENST00000612155 ANGEL1Q9UNK9 670 aaKnown RBP22.77■■□□□ 1.24
SRRM3-205ENST00000612155 PHF20L1A8MW92 1017 aa22.77■■□□□ 1.24
SRRM3-205ENST00000612155 SUPT20HL1Q3ZLR7 823 aa22.77■■□□□ 1.24
SRRM3-205ENST00000612155 OTUD7BQ6GQQ9 843 aa22.77■■□□□ 1.24
SRRM3-205ENST00000612155 WRNIP1Q96S55 665 aa22.77■■□□□ 1.24
SRRM3-205ENST00000612155 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.77■■□□□ 1.24
SRRM3-205ENST00000612155 FTOQ9C0B1 505 aaKnown RBP eCLIP22.77■■□□□ 1.24
SRRM3-205ENST00000612155 CCDC173Q0VFZ6 552 aa22.76■■□□□ 1.23
SRRM3-205ENST00000612155 TTLL12Q14166 644 aaPredicted RBP22.76■■□□□ 1.23
SRRM3-205ENST00000612155 FUCA2Q9BTY2 467 aa22.76■■□□□ 1.23
SRRM3-205ENST00000612155 IL17RBQ9NRM6 502 aa22.76■■□□□ 1.23
SRRM3-205ENST00000612155 TBC1D12O60347 775 aa22.76■■□□□ 1.23
SRRM3-205ENST00000612155 USP2O75604 605 aaPredicted RBP22.76■■□□□ 1.23
SRRM3-205ENST00000612155 ITGBL1O95965 494 aaPredicted RBP22.76■■□□□ 1.23
SRRM3-205ENST00000612155 GH2P01242 217 aa22.76■■□□□ 1.23
SRRM3-205ENST00000612155 MAP3K10Q02779 954 aa22.76■■□□□ 1.23
SRRM3-205ENST00000612155 GJB4Q9NTQ9 266 aa22.76■■□□□ 1.23
SRRM3-205ENST00000612155 LY9Q9HBG7 655 aa22.75■■□□□ 1.23
SRRM3-205ENST00000612155 ZNF287Q9HBT7 754 aa22.75■■□□□ 1.23
SRRM3-205ENST00000612155 RXRAP19793 462 aa22.74■■□□□ 1.23
SRRM3-205ENST00000612155 SEPT2Q15019 361 aa22.74■■□□□ 1.23
SRRM3-205ENST00000612155 ABCB5Q2M3G0 1257 aa22.74■■□□□ 1.23
SRRM3-205ENST00000612155 DCAF15Q66K64 600 aa22.74■■□□□ 1.23
SRRM3-205ENST00000612155 ZNF341Q9BYN7 854 aa22.74■■□□□ 1.23
SRRM3-205ENST00000612155 CDC27P30260 824 aa22.73■■□□□ 1.23
SRRM3-205ENST00000612155 GUCY1A2P33402 732 aa22.73■■□□□ 1.23
SRRM3-205ENST00000612155 KLRG1Q96E93 195 aa22.73■■□□□ 1.23
SRRM3-205ENST00000612155 PDLIM2Q96JY6 352 aa22.73■■□□□ 1.23
SRRM3-205ENST00000612155 IFIT3O14879 490 aaKnown RBP22.73■■□□□ 1.23
SRRM3-205ENST00000612155 CELF2O95319 508 aaKnown RBP22.73■■□□□ 1.23
SRRM3-205ENST00000612155 PCP11498 1178 aaKnown RBP22.73■■□□□ 1.23
SRRM3-205ENST00000612155 CAP2P40123 477 aa22.73■■□□□ 1.23
SRRM3-205ENST00000612155 ATP2B2Q01814 1243 aa22.73■■□□□ 1.23
SRRM3-205ENST00000612155 APOA5Q6Q788 366 aa22.73■■□□□ 1.23
SRRM3-205ENST00000612155 CEP95Q96GE4 821 aa22.73■■□□□ 1.23
SRRM3-205ENST00000612155 FAM217BQ9NTX9 383 aaPredicted RBP22.73■■□□□ 1.23
SRRM3-205ENST00000612155 ORC3Q9UBD5 711 aaPredicted RBP22.73■■□□□ 1.23
SRRM3-205ENST00000612155 TNKSO95271 1327 aa22.73■■□□□ 1.23
SRRM3-205ENST00000612155 CEBPZQ03701 1054 aaKnown RBP22.72■■□□□ 1.23
SRRM3-205ENST00000612155 ZSCAN10Q96SZ4 725 aaPredicted RBP22.72■■□□□ 1.23
SRRM3-205ENST00000612155 UBAC1Q9BSL1 405 aa22.72■■□□□ 1.23
SRRM3-205ENST00000612155 KIF3AQ9Y496 699 aa22.72■■□□□ 1.23
SRRM3-205ENST00000612155 UBE2Q2LH0YL09 131 aa22.72■■□□□ 1.23
SRRM3-205ENST00000612155 NF2P35240 595 aa22.72■■□□□ 1.23
SRRM3-205ENST00000612155 TMEM67Q5HYA8 995 aa22.72■■□□□ 1.23
SRRM3-205ENST00000612155 ENAHQ8N8S7 591 aaPredicted RBP22.72■■□□□ 1.23
SRRM3-205ENST00000612155 NEDD1Q8NHV4 660 aa22.72■■□□□ 1.23
SRRM3-205ENST00000612155 CLMNQ96JQ2 1002 aa22.72■■□□□ 1.23
SRRM3-205ENST00000612155 TMEM87BQ96K49 555 aa22.72■■□□□ 1.23
SRRM3-205ENST00000612155 USP28Q96RU2 1077 aa22.72■■□□□ 1.23
SRRM3-205ENST00000612155 STX8Q9UNK0 236 aa22.72■■□□□ 1.23
SRRM3-205ENST00000612155 MTMR7Q9Y216 660 aa22.72■■□□□ 1.23
SRRM3-205ENST00000612155 PPP1R12BO60237 982 aaPredicted RBP22.71■■□□□ 1.23
SRRM3-205ENST00000612155 CST9Q5W186 159 aa22.71■■□□□ 1.23
SRRM3-205ENST00000612155 ZBTB21Q9ULJ3 1066 aa22.71■■□□□ 1.23
SRRM3-205ENST00000612155 LETM1O95202 739 aaPredicted RBP22.7■■□□□ 1.23
SRRM3-205ENST00000612155 SGMS1Q86VZ5 419 aa22.7■■□□□ 1.23
SRRM3-205ENST00000612155 IQCA1Q86XH1 822 aa22.7■■□□□ 1.23
SRRM3-205ENST00000612155 AIFM3Q96NN9 605 aa22.7■■□□□ 1.23
SRRM3-205ENST00000612155 MYL10Q9BUA6 226 aa22.7■■□□□ 1.23
SRRM3-205ENST00000612155 RCOR1Q9UKL0 485 aa22.7■■□□□ 1.23
SRRM3-205ENST00000612155 DHX16O60231 1041 aaKnown RBP22.7■■□□□ 1.22
SRRM3-205ENST00000612155 RCSD1Q6JBY9 416 aa22.7■■□□□ 1.22
SRRM3-205ENST00000612155 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.7■■□□□ 1.22
SRRM3-205ENST00000612155 RASGRP2Q7LDG7 609 aa22.7■■□□□ 1.22
SRRM3-205ENST00000612155 CCDC144CPQ8IYA2 1237 aa22.7■■□□□ 1.22
SRRM3-205ENST00000612155 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.7■■□□□ 1.22
SRRM3-205ENST00000612155 CNKSR2Q8WXI2 1034 aa22.7■■□□□ 1.22
SRRM3-205ENST00000612155 HOOK2Q96ED9 719 aa22.7■■□□□ 1.22
SRRM3-205ENST00000612155 DACT1Q9NYF0 836 aa22.7■■□□□ 1.22
SRRM3-205ENST00000612155 METAP2P50579 478 aaKnown RBP eCLIP22.69■■□□□ 1.22
SRRM3-205ENST00000612155 NTRK3Q16288 839 aa22.69■■□□□ 1.22
SRRM3-205ENST00000612155 FBXO18Q8NFZ0 1043 aa22.69■■□□□ 1.22
SRRM3-205ENST00000612155 CCDC17Q96LX7 622 aa22.69■■□□□ 1.22
SRRM3-205ENST00000612155 CABP5Q9NP86 173 aa22.69■■□□□ 1.22
SRRM3-205ENST00000612155 ZNF112Q9UJU3 913 aa22.69■■□□□ 1.22
SRRM3-205ENST00000612155 ATAD5Q96QE3 1844 aa22.69■■□□□ 1.22
SRRM3-205ENST00000612155 CPLX1O14810 134 aa22.69■■□□□ 1.22
SRRM3-205ENST00000612155 VGLL4Q14135 290 aa22.69■■□□□ 1.22
SRRM3-205ENST00000612155 SEC23AQ15436 765 aa22.69■■□□□ 1.22
SRRM3-205ENST00000612155 C8orf76Q96K31 380 aa22.69■■□□□ 1.22
SRRM3-205ENST00000612155 CFAP45Q9UL16 551 aa22.69■■□□□ 1.22
SRRM3-205ENST00000612155 OTOFQ9HC10 1997 aa22.68■■□□□ 1.22
SRRM3-205ENST00000612155 NR1I2O75469 434 aa22.68■■□□□ 1.22
SRRM3-205ENST00000612155 LIFRP42702 1097 aa22.68■■□□□ 1.22
SRRM3-205ENST00000612155 MICU3Q86XE3 530 aa22.68■■□□□ 1.22
SRRM3-205ENST00000612155 SIAH1Q8IUQ4 282 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms