RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 CCDC42Q96M95 316 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 BPIFA3Q9BQP9 254 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 PPP2R2CQ9Y2T4 447 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 USO1O60763 962 aaKnown RBP7.19□□□□□ -1.26
SNX13-213ENST00000611725 NTRK3Q16288 839 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 TMED8Q6PL24 325 aaPredicted RBP7.19□□□□□ -1.26
SNX13-213ENST00000611725 FAM196AQ6ZSG2 479 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 EYA3Q99504 573 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 LEMD3Q9Y2U8 911 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 XDHP47989 1333 aa7.19□□□□□ -1.26
SNX13-213ENST00000611725 FOXN1O15353 648 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 TROAPQ12815 778 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 RASGRP4Q8TDF6 673 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 TSG101Q99816 390 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 TTF2Q9UNY4 1162 aaKnown RBP7.18□□□□□ -1.26
SNX13-213ENST00000611725 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.18□□□□□ -1.26
SNX13-213ENST00000611725 PTPAQ15257 358 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 ILDR1Q86SU0 546 aaPredicted RBP7.18□□□□□ -1.26
SNX13-213ENST00000611725 VGLL2Q8N8G2 317 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 GUCA1BQ9UMX6 200 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 BICDL2A1A5D9 508 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 IGSF3O75054 1194 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 USP17L8P0C7I0 530 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 ZNF76P36508 570 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 TXKP42681 527 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 PDE4DQ08499 809 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 ZNF569Q5MCW4 686 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 CCDC181Q5TID7 509 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 ZNF219Q9P2Y4 722 aaPredicted RBP7.18□□□□□ -1.26
SNX13-213ENST00000611725 MAP2P11137 1827 aaKnown RBP7.18□□□□□ -1.26
SNX13-213ENST00000611725 FAM205CA6NFA0 338 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 POTEB2H3BUK9 544 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 RIMBP2O15034 1052 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 CYP2D6P10635 497 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 RNF216Q9NWF9 866 aaPredicted RBP7.18□□□□□ -1.26
SNX13-213ENST00000611725 USP21Q9UK80 565 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 KRT86O43790 486 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 EIF6P56537 245 aaKnown RBP7.18□□□□□ -1.26
SNX13-213ENST00000611725 IQCEQ6IPM2 695 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 DHX40Q8IX18 779 aaKnown RBP7.18□□□□□ -1.26
SNX13-213ENST00000611725 CCDC102AQ96A19 550 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 NSUN4Q96CB9 384 aaKnown RBP7.18□□□□□ -1.26
SNX13-213ENST00000611725 CCDC51Q96ER9 411 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 DYNLL2Q96FJ2 89 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 TCEAL9Q9UHQ7 104 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 CTNND2Q9UQB3 1225 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 SMCO2A6NFE2 343 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 USP27XA6NNY8 438 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 CTIFO43310 598 aaKnown RBP7.18□□□□□ -1.26
SNX13-213ENST00000611725 LONP1P36776 959 aaKnown RBP7.18□□□□□ -1.26
SNX13-213ENST00000611725 PPP1R2P41236 205 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 BTDP43251 543 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 KRT83P78385 493 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 GALNT17Q6IS24 598 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 SMYD4Q8IYR2 804 aaPredicted RBP7.18□□□□□ -1.26
SNX13-213ENST00000611725 NOC3LQ8WTT2 800 aaKnown RBP7.18□□□□□ -1.26
SNX13-213ENST00000611725 MAN1B1Q9UKM7 699 aa7.18□□□□□ -1.26
SNX13-213ENST00000611725 NWD1Q149M9 1564 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 KAT6BQ8WYB5 2073 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 CTR9Q6PD62 1173 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 PPP1R13BQ96KQ4 1090 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 NAA15Q9BXJ9 866 aaKnown RBP7.17□□□□□ -1.26
SNX13-213ENST00000611725 COL5A2P05997 1499 aaPredicted RBP7.17□□□□□ -1.26
SNX13-213ENST00000611725 GTF2IP78347 998 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 GOLGA8FQ08AF8 430 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 GOLGA8DPQ0D2H9 430 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 TRIM14Q14142 442 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 NAA30Q147X3 362 aaPredicted RBP7.17□□□□□ -1.26
SNX13-213ENST00000611725 CT47A1Q5JQC4 288 aaPredicted RBP7.17□□□□□ -1.26
SNX13-213ENST00000611725 UTP14CQ5TAP6 766 aaKnown RBP7.17□□□□□ -1.26
SNX13-213ENST00000611725 ZNF622Q969S3 477 aaKnown RBP eCLIP7.17□□□□□ -1.262e-6■■■■□ 19.6
SNX13-213ENST00000611725 CTDP1Q9Y5B0 961 aaPredicted RBP7.17□□□□□ -1.26
SNX13-213ENST00000611725 ORC4O43929 436 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 ENOX2Q16206 610 aaKnown RBP7.17□□□□□ -1.26
SNX13-213ENST00000611725 ARL6IP4Q66PJ3 421 aaKnown RBP7.17□□□□□ -1.26
SNX13-213ENST00000611725 SPAG5Q96R06 1193 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 RUFY1Q96T51 708 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 MMRN2Q9H8L6 949 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 JCADQ9P266 1359 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 CTAGE9A4FU28 777 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 POLR3GO15318 223 aaPredicted RBP7.17□□□□□ -1.26
SNX13-213ENST00000611725 NMT2O60551 498 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 CCZ1BP86790 482 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 CCZ1P86791 482 aaPredicted RBP7.17□□□□□ -1.26
SNX13-213ENST00000611725 KIF5AQ12840 1032 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 NELFBQ8WX92 580 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 EEF2KMTQ96G04 330 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 RBM17Q96I25 401 aaKnown RBP7.17□□□□□ -1.26
SNX13-213ENST00000611725 HPSEQ9Y251 543 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 BCL9O00512 1426 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 SPATA31A1Q5TZJ5 1347 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 GRAPQ13588 217 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 SV2BQ7L1I2 683 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 CEP112Q8N8E3 955 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 OR8K1Q8NGG5 319 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 GRAPLQ8TC17 118 aaPredicted RBP7.17□□□□□ -1.26
SNX13-213ENST00000611725 DPF2Q92785 391 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 GOLGA1Q92805 767 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 RIOK1Q9BRS2 568 aaKnown RBP7.17□□□□□ -1.26
SNX13-213ENST00000611725 UBA5Q9GZZ9 404 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms