RNA–Protein interactions for RNA: ENST00000611527.1

FGFR2-223, Transcript of fibroblast growth factor receptor 2, human

TSL 3 BASIC

Gene FGFR2, Length 435 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR2-223	ENST00000611527	NKX2-3	Q8TAU0	364 aa		13.26	□□□□□ -0.29
FGFR2-223	ENST00000611527	TRIOBP	Q9H2D6	2365 aa		13.26	□□□□□ -0.29
FGFR2-223	ENST00000611527	MKNK2	Q9HBH9	465 aa		13.26	□□□□□ -0.29
FGFR2-223	ENST00000611527	ZNF287	Q9HBT7	754 aa		13.26	□□□□□ -0.29
FGFR2-223	ENST00000611527	GINM1	Q9NU53	330 aa		13.26	□□□□□ -0.29
FGFR2-223	ENST00000611527	CTNNA3	Q9UI47	895 aa		13.26	□□□□□ -0.29
FGFR2-223	ENST00000611527	COLQ	Q9Y215	455 aa	Predicted RBP	13.26	□□□□□ -0.29
FGFR2-223	ENST00000611527	RBM8A	Q9Y5S9	174 aa	Known RBP	13.26	□□□□□ -0.29
FGFR2-223	ENST00000611527	TACC3	Q9Y6A5	838 aa		13.26	□□□□□ -0.29
FGFR2-223	ENST00000611527		U3KPZ7	1027 aa	Predicted RBP	13.26	□□□□□ -0.29
FGFR2-223	ENST00000611527	USP17L5	A8MUK1	530 aa		13.25	□□□□□ -0.29
FGFR2-223	ENST00000611527	ADCY3	O60266	1144 aa		13.25	□□□□□ -0.29
FGFR2-223	ENST00000611527	GUCY1A2	P33402	732 aa		13.25	□□□□□ -0.29
FGFR2-223	ENST00000611527	HMGCS2	P54868	508 aa		13.25	□□□□□ -0.29
FGFR2-223	ENST00000611527	SPP2	Q13103	211 aa		13.25	□□□□□ -0.29
FGFR2-223	ENST00000611527	SEPT2	Q15019	361 aa		13.25	□□□□□ -0.29
FGFR2-223	ENST00000611527	IMMT	Q16891	758 aa	Known RBP	13.25	□□□□□ -0.29
FGFR2-223	ENST00000611527	TMEM179	Q6ZVK1	233 aa		13.25	□□□□□ -0.29
FGFR2-223	ENST00000611527	ANKRD13C	Q8N6S4	541 aa		13.25	□□□□□ -0.29
FGFR2-223	ENST00000611527	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.25	□□□□□ -0.29
FGFR2-223	ENST00000611527	STAG1	Q8WVM7	1258 aa		13.25	□□□□□ -0.29
FGFR2-223	ENST00000611527	CCDC17	Q96LX7	622 aa		13.25	□□□□□ -0.29
FGFR2-223	ENST00000611527	UNC93B1	Q9H1C4	597 aa		13.25	□□□□□ -0.29
FGFR2-223	ENST00000611527	CABP5	Q9NP86	173 aa		13.25	□□□□□ -0.29
FGFR2-223	ENST00000611527	DOCK3	Q8IZD9	2030 aa		13.24	□□□□□ -0.29
FGFR2-223	ENST00000611527	ZNF213	O14771	459 aa		13.24	□□□□□ -0.29
FGFR2-223	ENST00000611527	ORC4	O43929	436 aa		13.24	□□□□□ -0.29
FGFR2-223	ENST00000611527	INHA	P05111	366 aa		13.24	□□□□□ -0.29
FGFR2-223	ENST00000611527	FXR1	P51114	621 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
FGFR2-223	ENST00000611527	ICA1	Q05084	483 aa		13.24	□□□□□ -0.29
FGFR2-223	ENST00000611527	RRP12	Q5JTH9	1297 aa	Known RBP	13.24	□□□□□ -0.29
FGFR2-223	ENST00000611527	AKNAD1	Q5T1N1	836 aa		13.24	□□□□□ -0.29
FGFR2-223	ENST00000611527	UBE2Q1	Q7Z7E8	422 aa		13.24	□□□□□ -0.29
FGFR2-223	ENST00000611527	ZNF280C	Q8ND82	737 aa		13.24	□□□□□ -0.29
FGFR2-223	ENST00000611527	U2AF1L4	Q8WU68	220 aa	Known RBP	13.24	□□□□□ -0.29
FGFR2-223	ENST00000611527	FEZ1	Q99689	392 aa		13.24	□□□□□ -0.29
FGFR2-223	ENST00000611527	TBC1D2	Q9BYX2	928 aa		13.24	□□□□□ -0.29
FGFR2-223	ENST00000611527	AS3MT	Q9HBK9	375 aa		13.24	□□□□□ -0.29
FGFR2-223	ENST00000611527	INCENP	Q9NQS7	918 aa		13.24	□□□□□ -0.29
FGFR2-223	ENST00000611527	TOMM22	Q9NS69	142 aa		13.24	□□□□□ -0.29
FGFR2-223	ENST00000611527	PNMA3	Q9UL41	463 aa		13.24	□□□□□ -0.29
FGFR2-223	ENST00000611527	MTMR2	Q13614	643 aa		13.23	□□□□□ -0.29
FGFR2-223	ENST00000611527	FAM110C	Q1W6H9	321 aa		13.23	□□□□□ -0.29
FGFR2-223	ENST00000611527	FAM47A	Q5JRC9	791 aa		13.23	□□□□□ -0.29
FGFR2-223	ENST00000611527	DPF3	Q92784	378 aa		13.23	□□□□□ -0.29
FGFR2-223	ENST00000611527	MAP4K1	Q92918	833 aa		13.23	□□□□□ -0.29
FGFR2-223	ENST00000611527	WDR18	Q9BV38	432 aa		13.23	□□□□□ -0.29
FGFR2-223	ENST00000611527	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
FGFR2-223	ENST00000611527	RNF41	Q9H4P4	317 aa	Predicted RBP	13.23	□□□□□ -0.29
FGFR2-223	ENST00000611527	TAF6L	Q9Y6J9	622 aa		13.23	□□□□□ -0.29
FGFR2-223	ENST00000611527	TSPY2	A6NKD2	308 aa		13.22	□□□□□ -0.29
FGFR2-223	ENST00000611527	RANBP6	O60518	1105 aa	Known RBP	13.22	□□□□□ -0.29
FGFR2-223	ENST00000611527	FARP2	O94887	1054 aa	Predicted RBP	13.22	□□□□□ -0.29
FGFR2-223	ENST00000611527	CYP21A2	P08686	494 aa		13.22	□□□□□ -0.29
FGFR2-223	ENST00000611527	FGR	P09769	529 aa		13.22	□□□□□ -0.29
FGFR2-223	ENST00000611527	TSPY3	P0CV98	308 aa		13.22	□□□□□ -0.29
FGFR2-223	ENST00000611527	TSPY8	P0CW00	308 aa		13.22	□□□□□ -0.29
FGFR2-223	ENST00000611527	PC	P11498	1178 aa	Known RBP	13.22	□□□□□ -0.29
FGFR2-223	ENST00000611527	IRF5	Q13568	498 aa		13.22	□□□□□ -0.29
FGFR2-223	ENST00000611527	CHRDL2	Q6WN34	429 aa		13.22	□□□□□ -0.29
FGFR2-223	ENST00000611527	MFSD6	Q6ZSS7	791 aa		13.22	□□□□□ -0.29
FGFR2-223	ENST00000611527	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.22	□□□□□ -0.29
FGFR2-223	ENST00000611527	ACER1	Q8TDN7	264 aa		13.22	□□□□□ -0.29
FGFR2-223	ENST00000611527	PXYLP1	Q8TE99	480 aa		13.22	□□□□□ -0.29
FGFR2-223	ENST00000611527	COA7	Q96BR5	231 aa		13.22	□□□□□ -0.29
FGFR2-223	ENST00000611527	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.22	□□□□□ -0.29
FGFR2-223	ENST00000611527	PLXNB2	O15031	1838 aa		13.22	□□□□□ -0.29
FGFR2-223	ENST00000611527	IGKV6D-41	A0A0C4DH26	115 aa		13.21	□□□□□ -0.29
FGFR2-223	ENST00000611527		B4E1Z4	1266 aa		13.21	□□□□□ -0.29
FGFR2-223	ENST00000611527	REC8	O95072	547 aa		13.21	□□□□□ -0.29
FGFR2-223	ENST00000611527	GCLC	P48506	637 aa	Predicted RBP	13.21	□□□□□ -0.29
FGFR2-223	ENST00000611527	TFAP4	Q01664	338 aa		13.21	□□□□□ -0.29
FGFR2-223	ENST00000611527	ATP2B2	Q01814	1243 aa		13.21	□□□□□ -0.29
FGFR2-223	ENST00000611527	ZYX	Q15942	572 aa	Known RBP	13.21	□□□□□ -0.29
FGFR2-223	ENST00000611527	NEDD1	Q8NHV4	660 aa		13.21	□□□□□ -0.29
FGFR2-223	ENST00000611527	CEP95	Q96GE4	821 aa		13.21	□□□□□ -0.29
FGFR2-223	ENST00000611527	HTATIP2	Q9BUP3	242 aa		13.21	□□□□□ -0.29
FGFR2-223	ENST00000611527	RANBP2	P49792	3224 aa	Known RBP	13.21	□□□□□ -0.29
FGFR2-223	ENST00000611527	PARP14	Q460N5	1801 aa		13.2	□□□□□ -0.3
FGFR2-223	ENST00000611527	ALPK3	Q96L96	1907 aa		13.2	□□□□□ -0.3
FGFR2-223	ENST00000611527	USP17L10	C9JJH3	530 aa		13.2	□□□□□ -0.3
FGFR2-223	ENST00000611527	SLC27A2	O14975	620 aa		13.2	□□□□□ -0.3
FGFR2-223	ENST00000611527	SGPL1	O95470	568 aa		13.2	□□□□□ -0.3
FGFR2-223	ENST00000611527	BACE1	P56817	501 aa		13.2	□□□□□ -0.3
FGFR2-223	ENST00000611527	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
FGFR2-223	ENST00000611527	SH3D19	Q5HYK7	790 aa		13.2	□□□□□ -0.3
FGFR2-223	ENST00000611527	CREB3L3	Q68CJ9	461 aa		13.2	□□□□□ -0.3
FGFR2-223	ENST00000611527	STOX1	Q6ZVD7	989 aa		13.2	□□□□□ -0.3
FGFR2-223	ENST00000611527	ESR2	Q92731	530 aa		13.2	□□□□□ -0.3
FGFR2-223	ENST00000611527	DEFB118	Q96PH6	123 aa		13.2	□□□□□ -0.3
FGFR2-223	ENST00000611527	KANSL2	Q9H9L4	492 aa		13.2	□□□□□ -0.3
FGFR2-223	ENST00000611527	ARHGEF10L	Q9HCE6	1279 aa		13.2	□□□□□ -0.3
FGFR2-223	ENST00000611527		A0A1W2PRG0	241 aa		13.19	□□□□□ -0.3
FGFR2-223	ENST00000611527	NMT2	O60551	498 aa		13.19	□□□□□ -0.3
FGFR2-223	ENST00000611527	KDM4A	O75164	1064 aa		13.19	□□□□□ -0.3
FGFR2-223	ENST00000611527	EEF2	P13639	858 aa	Known RBP	13.19	□□□□□ -0.3
FGFR2-223	ENST00000611527	IRX3	P78415	501 aa	Predicted RBP	13.19	□□□□□ -0.3
FGFR2-223	ENST00000611527	LRRC47	Q8N1G4	583 aa	Known RBP	13.19	□□□□□ -0.3
FGFR2-223	ENST00000611527	KIAA1683	Q9H0B3	1180 aa		13.19	□□□□□ -0.3
FGFR2-223	ENST00000611527	SH2D4A	Q9H788	454 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms