RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 RAI14Q9P0K7 980 aa8.56□□□□□ -1.04
CBWD1-219ENST00000611457 RBM26Q5T8P6 1007 aaKnown RBP8.55□□□□□ -1.04
CBWD1-219ENST00000611457 IFNL3Q8IZI9 196 aa8.55□□□□□ -1.04
CBWD1-219ENST00000611457 EMID1Q96A84 441 aaPredicted RBP8.55□□□□□ -1.04
CBWD1-219ENST00000611457 CNNM2Q9H8M5 875 aa8.55□□□□□ -1.04
CBWD1-219ENST00000611457 BRPF3Q9ULD4 1205 aa8.55□□□□□ -1.04
CBWD1-219ENST00000611457 hCG_1984214I3L0E3 225 aa8.55□□□□□ -1.04
CBWD1-219ENST00000611457 EDNRBP24530 442 aa8.55□□□□□ -1.04
CBWD1-219ENST00000611457 CTGFP29279 349 aa8.55□□□□□ -1.04
CBWD1-219ENST00000611457 GJA8P48165 433 aa8.55□□□□□ -1.04
CBWD1-219ENST00000611457 ABCB5Q2M3G0 1257 aa8.55□□□□□ -1.04
CBWD1-219ENST00000611457 ZNF792Q3KQV3 632 aa8.55□□□□□ -1.04
CBWD1-219ENST00000611457 ZNF713Q8N859 430 aaPredicted RBP8.55□□□□□ -1.04
CBWD1-219ENST00000611457 SLC43A3Q8NBI5 491 aa8.55□□□□□ -1.04
CBWD1-219ENST00000611457 ARHGEF10LQ9HCE6 1279 aa8.55□□□□□ -1.04
CBWD1-219ENST00000611457 GOPCQ9HD26 462 aa8.55□□□□□ -1.04
CBWD1-219ENST00000611457 HOXC10Q9NYD6 342 aa8.55□□□□□ -1.04
CBWD1-219ENST00000611457 MNX1P50219 401 aaPredicted RBP8.55□□□□□ -1.04
CBWD1-219ENST00000611457 PPP2R5BQ15173 497 aa8.55□□□□□ -1.04
CBWD1-219ENST00000611457 PI16Q6UXB8 463 aa8.55□□□□□ -1.04
CBWD1-219ENST00000611457 BEGAINQ9BUH8 593 aa8.55□□□□□ -1.04
CBWD1-219ENST00000611457 KATNBL1Q9H079 304 aa8.55□□□□□ -1.04
CBWD1-219ENST00000611457 PUS7LQ9H0K6 701 aaKnown RBP8.55□□□□□ -1.04
CBWD1-219ENST00000611457 CCDC8Q9H0W5 538 aaPredicted RBP8.55□□□□□ -1.04
CBWD1-219ENST00000611457 MTMR4Q9NYA4 1195 aa8.55□□□□□ -1.04
CBWD1-219ENST00000611457 PPP1R9AQ9ULJ8 1098 aa8.55□□□□□ -1.04
CBWD1-219ENST00000611457 SPDYE16A6NNV3 312 aaPredicted RBP8.54□□□□□ -1.04
CBWD1-219ENST00000611457 SDSP20132 328 aa8.54□□□□□ -1.04
CBWD1-219ENST00000611457 GORABQ5T7V8 394 aa8.54□□□□□ -1.04
CBWD1-219ENST00000611457 ASCC2Q9H1I8 757 aaPredicted RBP8.54□□□□□ -1.04
CBWD1-219ENST00000611457 RNF41Q9H4P4 317 aaPredicted RBP8.54□□□□□ -1.04
CBWD1-219ENST00000611457 RBPJLQ9UBG7 517 aa8.54□□□□□ -1.04
CBWD1-219ENST00000611457 FBXO40Q9UH90 709 aa8.54□□□□□ -1.04
CBWD1-219ENST00000611457 KIAA1671Q9BY89 1806 aa8.54□□□□□ -1.04
CBWD1-219ENST00000611457 GPAA1O43292 621 aa8.54□□□□□ -1.04
CBWD1-219ENST00000611457 SLC3A2P08195 630 aaKnown RBP8.54□□□□□ -1.04
CBWD1-219ENST00000611457 PTPREP23469 700 aa8.54□□□□□ -1.04
CBWD1-219ENST00000611457 PDE4AP27815 886 aa8.54□□□□□ -1.04
CBWD1-219ENST00000611457 TRAF1Q13077 416 aa8.54□□□□□ -1.04
CBWD1-219ENST00000611457 CERKLQ49MI3 558 aaPredicted RBP8.54□□□□□ -1.04
CBWD1-219ENST00000611457 SHISA4Q96DD7 197 aa8.54□□□□□ -1.04
CBWD1-219ENST00000611457 TRIM47Q96LD4 638 aa8.54□□□□□ -1.04
CBWD1-219ENST00000611457 NACAP1Q9BZK3 213 aa8.54□□□□□ -1.04
CBWD1-219ENST00000611457 SLC38A10Q9HBR0 1119 aa8.54□□□□□ -1.04
CBWD1-219ENST00000611457 COL4A4P53420 1690 aaPredicted RBP8.54□□□□□ -1.04
CBWD1-219ENST00000611457 PLIN1O60240 522 aa8.54□□□□□ -1.04
CBWD1-219ENST00000611457 GJB1P08034 283 aa8.54□□□□□ -1.04
CBWD1-219ENST00000611457 DYNLL1P63167 89 aaKnown RBP8.54□□□□□ -1.04
CBWD1-219ENST00000611457 PTPN11Q06124 597 aaPredicted RBP8.54□□□□□ -1.04
CBWD1-219ENST00000611457 COL13A1Q5TAT6 717 aaPredicted RBP8.54□□□□□ -1.04
CBWD1-219ENST00000611457 AMOTL1Q8IY63 956 aa8.54□□□□□ -1.04
CBWD1-219ENST00000611457 NEUROD6Q96NK8 337 aa8.54□□□□□ -1.04
CBWD1-219ENST00000611457 C1orf115Q9H7X2 142 aa8.54□□□□□ -1.04
CBWD1-219ENST00000611457 VEZTQ9HBM0 779 aa8.54□□□□□ -1.04
CBWD1-219ENST00000611457 AATFQ9NY61 560 aaKnown RBP eCLIP8.54□□□□□ -1.04
CBWD1-219ENST00000611457 CTNNA3Q9UI47 895 aa8.54□□□□□ -1.04
CBWD1-219ENST00000611457 PFASO15067 1338 aa8.53□□□□□ -1.04
CBWD1-219ENST00000611457 ATG2AQ2TAZ0 1938 aa8.53□□□□□ -1.04
CBWD1-219ENST00000611457 MBD4O95243 580 aa8.53□□□□□ -1.04
CBWD1-219ENST00000611457 CCNA1P78396 465 aa8.53□□□□□ -1.04
CBWD1-219ENST00000611457 SEC23AQ15436 765 aa8.53□□□□□ -1.04
CBWD1-219ENST00000611457 SESTD1Q86VW0 696 aa8.53□□□□□ -1.04
CBWD1-219ENST00000611457 TGFBRAP1Q8WUH2 860 aa8.53□□□□□ -1.04
CBWD1-219ENST00000611457 MAP4K1Q92918 833 aa8.53□□□□□ -1.04
CBWD1-219ENST00000611457 IGHDP01880 384 aa8.53□□□□□ -1.04
CBWD1-219ENST00000611457 HMGCRP04035 888 aa8.53□□□□□ -1.04
CBWD1-219ENST00000611457 VCAM1P19320 739 aa8.53□□□□□ -1.04
CBWD1-219ENST00000611457 PLCD1P51178 756 aa8.53□□□□□ -1.04
CBWD1-219ENST00000611457 HERVK_113P62684 666 aa8.53□□□□□ -1.04
CBWD1-219ENST00000611457 PPARAQ07869 468 aa8.53□□□□□ -1.04
CBWD1-219ENST00000611457 PPP1R18Q6NYC8 613 aa8.53□□□□□ -1.04
CBWD1-219ENST00000611457 RPTORQ8N122 1335 aa8.53□□□□□ -1.04
CBWD1-219ENST00000611457 GOLIM4O00461 696 aa8.52□□□□□ -1.04
CBWD1-219ENST00000611457 CYBAP13498 195 aa8.52□□□□□ -1.04
CBWD1-219ENST00000611457 ERVK-9P63128 1117 aa8.52□□□□□ -1.04
CBWD1-219ENST00000611457 ERVK-24P63145 666 aa8.52□□□□□ -1.04
CBWD1-219ENST00000611457 CAP1Q01518 475 aa8.52□□□□□ -1.04
CBWD1-219ENST00000611457 KIF22Q14807 665 aa8.52□□□□□ -1.04
CBWD1-219ENST00000611457 XRRA1Q6P2D8 792 aa8.52□□□□□ -1.04
CBWD1-219ENST00000611457 ZNF214Q9UL59 606 aaPredicted RBP8.52□□□□□ -1.04
CBWD1-219ENST00000611457 TMEM265A0A087WTH1 108 aa8.52□□□□□ -1.05
CBWD1-219ENST00000611457 SGSM2O43147 1006 aa8.52□□□□□ -1.05
CBWD1-219ENST00000611457 TTLL1O95922 423 aa8.52□□□□□ -1.05
CBWD1-219ENST00000611457 MCTP2Q6DN12 878 aa8.52□□□□□ -1.05
CBWD1-219ENST00000611457 MOB2Q70IA6 237 aa8.52□□□□□ -1.05
CBWD1-219ENST00000611457 GPRC5AQ8NFJ5 357 aa8.52□□□□□ -1.05
CBWD1-219ENST00000611457 LZTS2Q9BRK4 669 aa8.52□□□□□ -1.05
CBWD1-219ENST00000611457 TMOD4Q9NZQ9 345 aa8.52□□□□□ -1.05
CBWD1-219ENST00000611457 MAP2K5Q13163 448 aa8.52□□□□□ -1.05
CBWD1-219ENST00000611457 OS9Q13438 667 aaPredicted RBP8.52□□□□□ -1.05
CBWD1-219ENST00000611457 COG2Q14746 738 aa8.52□□□□□ -1.05
CBWD1-219ENST00000611457 CCSAPQ6IQ19 270 aaPredicted RBP8.52□□□□□ -1.05
CBWD1-219ENST00000611457 BACH2Q9BYV9 841 aa8.52□□□□□ -1.05
CBWD1-219ENST00000611457 PHF24Q9UPV7 400 aa8.52□□□□□ -1.05
CBWD1-219ENST00000611457 TACC3Q9Y6A5 838 aa8.52□□□□□ -1.05
CBWD1-219ENST00000611457 U3KPZ7 1027 aaPredicted RBP8.52□□□□□ -1.05
CBWD1-219ENST00000611457 STAM2O75886 525 aa8.51□□□□□ -1.05
CBWD1-219ENST00000611457 HSPD1P10809 573 aaKnown RBP8.51□□□□□ -1.05
CBWD1-219ENST00000611457 GSPT1P15170 499 aaKnown RBP8.51□□□□□ -1.05
CBWD1-219ENST00000611457 HOXC8P31273 242 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms