RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 RASA1P20936 1047 aa13.68□□□□□ -0.22
USP6NL-206ENST00000609853 SMARCA1P28370 1054 aa13.68□□□□□ -0.22
USP6NL-206ENST00000609853 RHBDL3P58872 404 aa13.68□□□□□ -0.22
USP6NL-206ENST00000609853 NLRP5P59047 1200 aa13.68□□□□□ -0.22
USP6NL-206ENST00000609853 EVX2Q03828 476 aa13.68□□□□□ -0.22
USP6NL-206ENST00000609853 NOLC1Q14978 699 aaKnown RBP eCLIP13.68□□□□□ -0.22
USP6NL-206ENST00000609853 DPCR1Q3MIW9 517 aa13.68□□□□□ -0.22
USP6NL-206ENST00000609853 LONRF3Q496Y0 759 aa13.68□□□□□ -0.22
USP6NL-206ENST00000609853 MAPKAPK5Q8IW41 473 aa13.68□□□□□ -0.22
USP6NL-206ENST00000609853 AOPEPQ8N6M6 819 aa13.68□□□□□ -0.22
USP6NL-206ENST00000609853 NEDD1Q8NHV4 660 aa13.68□□□□□ -0.22
USP6NL-206ENST00000609853 DYNLL2Q96FJ2 89 aa13.68□□□□□ -0.22
USP6NL-206ENST00000609853 PYM1Q9BRP8 204 aaKnown RBP13.68□□□□□ -0.22
USP6NL-206ENST00000609853 FLT1P17948 1338 aa13.68□□□□□ -0.22
USP6NL-206ENST00000609853 PLCD1P51178 756 aa13.67□□□□□ -0.22
USP6NL-206ENST00000609853 NPY5RQ15761 445 aa13.67□□□□□ -0.22
USP6NL-206ENST00000609853 NT5DC1Q5TFE4 455 aa13.67□□□□□ -0.22
USP6NL-206ENST00000609853 OLFM4Q6UX06 510 aa13.67□□□□□ -0.22
USP6NL-206ENST00000609853 COL23A1Q86Y22 540 aaPredicted RBP13.67□□□□□ -0.22
USP6NL-206ENST00000609853 MPNDQ8N594 471 aa13.67□□□□□ -0.22
USP6NL-206ENST00000609853 TRIML1Q8N9V2 468 aa13.67□□□□□ -0.22
USP6NL-206ENST00000609853 CCDC148Q8NFR7 591 aa13.67□□□□□ -0.22
USP6NL-206ENST00000609853 KIAA1524Q8TCG1 905 aa13.67□□□□□ -0.22
USP6NL-206ENST00000609853 SHISA4Q96DD7 197 aa13.67□□□□□ -0.22
USP6NL-206ENST00000609853 MASTLQ96GX5 879 aa13.67□□□□□ -0.22
USP6NL-206ENST00000609853 ZNF830Q96NB3 372 aaPredicted RBP13.67□□□□□ -0.22
USP6NL-206ENST00000609853 EYA3Q99504 573 aa13.67□□□□□ -0.22
USP6NL-206ENST00000609853 PARP3Q9Y6F1 533 aa13.67□□□□□ -0.22
USP6NL-206ENST00000609853 TPM2P07951 284 aa13.67□□□□□ -0.22
USP6NL-206ENST00000609853 CDK8P49336 464 aa13.67□□□□□ -0.22
USP6NL-206ENST00000609853 MDM2Q00987 491 aaPredicted RBP13.67□□□□□ -0.22
USP6NL-206ENST00000609853 ZNF827Q17R98 1081 aa13.67□□□□□ -0.22
USP6NL-206ENST00000609853 CT47A1Q5JQC4 288 aaPredicted RBP13.67□□□□□ -0.22
USP6NL-206ENST00000609853 CCDC186Q7Z3E2 898 aa13.67□□□□□ -0.22
USP6NL-206ENST00000609853 METTL16Q86W50 562 aaKnown RBP13.67□□□□□ -0.22
USP6NL-206ENST00000609853 IMPACTQ9P2X3 320 aa13.67□□□□□ -0.22
USP6NL-206ENST00000609853 DACH1Q9UI36 760 aa13.67□□□□□ -0.22
USP6NL-206ENST00000609853 BAZ2BQ9UIF8 2168 aaKnown RBP13.66□□□□□ -0.22
USP6NL-206ENST00000609853 PALM3A6NDB9 673 aaPredicted RBP13.66□□□□□ -0.22
USP6NL-206ENST00000609853 APBA3O96018 575 aa13.66□□□□□ -0.22
USP6NL-206ENST00000609853 NOVP48745 357 aa13.66□□□□□ -0.22
USP6NL-206ENST00000609853 GTF2IP78347 998 aa13.66□□□□□ -0.22
USP6NL-206ENST00000609853 TTC38Q5R3I4 469 aa13.66□□□□□ -0.22
USP6NL-206ENST00000609853 SLC51AQ86UW1 340 aa13.66□□□□□ -0.22
USP6NL-206ENST00000609853 DAGLBQ8NCG7 672 aa13.66□□□□□ -0.22
USP6NL-206ENST00000609853 ERCC4Q92889 916 aaPredicted RBP13.66□□□□□ -0.22
USP6NL-206ENST00000609853 KCNF1Q9H3M0 494 aa13.66□□□□□ -0.22
USP6NL-206ENST00000609853 MAD2L2Q9UI95 211 aa13.66□□□□□ -0.22
USP6NL-206ENST00000609853 MYO3BQ8WXR4 1341 aa13.66□□□□□ -0.22
USP6NL-206ENST00000609853 PLIN4Q96Q06 1357 aa13.65□□□□□ -0.22
USP6NL-206ENST00000609853 POLR2DO15514 142 aaKnown RBP13.65□□□□□ -0.22
USP6NL-206ENST00000609853 TOP1P11387 765 aaKnown RBP13.65□□□□□ -0.22
USP6NL-206ENST00000609853 PTGS1P23219 599 aa13.65□□□□□ -0.22
USP6NL-206ENST00000609853 GSDMDP57764 484 aa13.65□□□□□ -0.22
USP6NL-206ENST00000609853 ATP2C1P98194 919 aaPredicted RBP13.65□□□□□ -0.22
USP6NL-206ENST00000609853 PNOCQ13519 176 aa13.65□□□□□ -0.22
USP6NL-206ENST00000609853 POSTNQ15063 836 aa13.65□□□□□ -0.22
USP6NL-206ENST00000609853 ARL6IP4Q66PJ3 421 aaKnown RBP13.65□□□□□ -0.22
USP6NL-206ENST00000609853 DPP8Q6V1X1 898 aaPredicted RBP13.65□□□□□ -0.22
USP6NL-206ENST00000609853 CCDC12Q8WUD4 166 aaPredicted RBP13.65□□□□□ -0.22
USP6NL-206ENST00000609853 TMEM47Q9BQJ4 181 aa13.65□□□□□ -0.22
USP6NL-206ENST00000609853 SPZ1Q9BXG8 430 aa13.65□□□□□ -0.22
USP6NL-206ENST00000609853 CSRNP2Q9H175 543 aa13.65□□□□□ -0.22
USP6NL-206ENST00000609853 SAP30BPQ9UHR5 308 aaKnown RBP13.65□□□□□ -0.22
USP6NL-206ENST00000609853 PCDHA4Q9UN74 947 aa13.65□□□□□ -0.22
USP6NL-206ENST00000609853 DAGLAQ9Y4D2 1042 aa13.65□□□□□ -0.22
USP6NL-206ENST00000609853 hCG_1642624A0A1W2PR95 340 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 USP17L3A6NCW0 530 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 USP17L4A6NCW7 530 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 BIN1O00499 593 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 SMC2O95347 1197 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 ATP2B1P20020 1258 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 MYL5Q02045 173 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 HHIPL2Q6UWX4 724 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 USP17L1Q7RTZ2 530 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 BLIDQ8IZY5 108 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 MLKLQ8NB16 471 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 MRIQ9BWK5 157 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 STX8Q9UNK0 236 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 PCDHA5Q9Y5H7 936 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 SNED1Q8TER0 1413 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 MYH8P13535 1937 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 MMP10P09238 476 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 SARSP49591 514 aaKnown RBP13.64□□□□□ -0.23
USP6NL-206ENST00000609853 FKBP1AP62942 108 aaKnown RBP13.64□□□□□ -0.23
USP6NL-206ENST00000609853 NCAPHQ15003 741 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 PPP4R3BQ5MIZ7 849 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 PODNQ7Z5L7 613 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 SPATA20Q8TB22 786 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 SMARCE1Q969G3 411 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 SWAP70Q9UH65 585 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 C10orf71Q711Q0 1435 aa13.64□□□□□ -0.23
USP6NL-206ENST00000609853 COL11A2P13942 1736 aaPredicted RBP13.63□□□□□ -0.23
USP6NL-206ENST00000609853 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.63□□□□□ -0.23
USP6NL-206ENST00000609853 hCG_1984214I3L0E3 225 aa13.63□□□□□ -0.23
USP6NL-206ENST00000609853 CBFA2T2O43439 604 aa13.63□□□□□ -0.23
USP6NL-206ENST00000609853 ACTN4O43707 911 aaKnown RBP13.63□□□□□ -0.23
USP6NL-206ENST00000609853 PARP1P09874 1014 aaKnown RBP13.63□□□□□ -0.23
USP6NL-206ENST00000609853 SLFN14P0C7P3 912 aa13.63□□□□□ -0.23
USP6NL-206ENST00000609853 SLC4A8Q2Y0W8 1093 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 370.5 ms