RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 FBXL19Q6PCT2 694 aa6.84□□□□□ -1.31
SMCHD1-213ENST00000609587 CDC37L1Q7L3B6 337 aa6.84□□□□□ -1.31
SMCHD1-213ENST00000609587 GOLM1Q8NBJ4 401 aa6.84□□□□□ -1.31
SMCHD1-213ENST00000609587 JARID2Q92833 1246 aaPredicted RBP6.84□□□□□ -1.31
SMCHD1-213ENST00000609587 RELTQ969Z4 430 aa6.84□□□□□ -1.31
SMCHD1-213ENST00000609587 WNT10AQ9GZT5 417 aa6.84□□□□□ -1.31
SMCHD1-213ENST00000609587 SUPT16HQ9Y5B9 1047 aaKnown RBP6.84□□□□□ -1.31
SMCHD1-213ENST00000609587 PRAMEF27A3QJZ7 478 aa6.83□□□□□ -1.32
SMCHD1-213ENST00000609587 GARTP22102 1010 aa6.83□□□□□ -1.32
SMCHD1-213ENST00000609587 CAP2P40123 477 aa6.83□□□□□ -1.32
SMCHD1-213ENST00000609587 RPL6Q02878 288 aaKnown RBP6.83□□□□□ -1.32
SMCHD1-213ENST00000609587 TINF2Q9BSI4 451 aa6.83□□□□□ -1.32
SMCHD1-213ENST00000609587 PARD6AQ9NPB6 346 aa6.83□□□□□ -1.32
SMCHD1-213ENST00000609587 KCNQ5Q9NR82 932 aa6.83□□□□□ -1.32
SMCHD1-213ENST00000609587 GREM1O60565 184 aa6.82□□□□□ -1.32
SMCHD1-213ENST00000609587 BNC2Q6ZN30 1099 aaPredicted RBP6.82□□□□□ -1.32
SMCHD1-213ENST00000609587 ARMCX6Q7L4S7 300 aa6.82□□□□□ -1.32
SMCHD1-213ENST00000609587 GATAD2BQ8WXI9 593 aa6.82□□□□□ -1.32
SMCHD1-213ENST00000609587 GPRASP2Q96D09 838 aa6.82□□□□□ -1.32
SMCHD1-213ENST00000609587 ALPK1Q96QP1 1244 aa6.82□□□□□ -1.32
SMCHD1-213ENST00000609587 IRF2BPLQ9H1B7 796 aa6.82□□□□□ -1.32
SMCHD1-213ENST00000609587 FAM221AA4D161 298 aa6.81□□□□□ -1.32
SMCHD1-213ENST00000609587 H3BS24 57 aa6.81□□□□□ -1.32
SMCHD1-213ENST00000609587 CILPO75339 1184 aa6.81□□□□□ -1.32
SMCHD1-213ENST00000609587 LRIG2O94898 1065 aa6.81□□□□□ -1.32
SMCHD1-213ENST00000609587 F13A1P00488 732 aa6.81□□□□□ -1.32
SMCHD1-213ENST00000609587 GJA8P48165 433 aa6.81□□□□□ -1.32
SMCHD1-213ENST00000609587 SLBPQ14493 270 aaKnown RBP eCLIP6.81□□□□□ -1.32
SMCHD1-213ENST00000609587 CDKAL1Q5VV42 579 aa6.81□□□□□ -1.32
SMCHD1-213ENST00000609587 FAM196AQ6ZSG2 479 aa6.81□□□□□ -1.32
SMCHD1-213ENST00000609587 C22orf34Q6ZV56 151 aa6.81□□□□□ -1.32
SMCHD1-213ENST00000609587 HID1Q8IV36 788 aa6.81□□□□□ -1.32
SMCHD1-213ENST00000609587 MFSD4AQ8N468 514 aa6.81□□□□□ -1.32
SMCHD1-213ENST00000609587 SLC43A3Q8NBI5 491 aa6.81□□□□□ -1.32
SMCHD1-213ENST00000609587 EAF1Q96JC9 268 aaPredicted RBP6.81□□□□□ -1.32
SMCHD1-213ENST00000609587 NT5C1AQ9BXI3 368 aa6.81□□□□□ -1.32
SMCHD1-213ENST00000609587 CNTNAP4Q9C0A0 1308 aa6.8□□□□□ -1.32
SMCHD1-213ENST00000609587 BPNT1O95861 308 aa6.8□□□□□ -1.32
SMCHD1-213ENST00000609587 GRK4P32298 578 aa6.8□□□□□ -1.32
SMCHD1-213ENST00000609587 ETF1P62495 437 aaKnown RBP6.8□□□□□ -1.32
SMCHD1-213ENST00000609587 APOBRQ0VD83 1088 aa6.8□□□□□ -1.32
SMCHD1-213ENST00000609587 VPS37DQ86XT2 251 aa6.8□□□□□ -1.32
SMCHD1-213ENST00000609587 ABHD4Q8TB40 342 aa6.8□□□□□ -1.32
SMCHD1-213ENST00000609587 SLC26A8Q96RN1 970 aa6.8□□□□□ -1.32
SMCHD1-213ENST00000609587 FBRSQ9HAH7 460 aa6.8□□□□□ -1.32
SMCHD1-213ENST00000609587 UBP1Q9NZI7 540 aa6.8□□□□□ -1.32
SMCHD1-213ENST00000609587 SLAMF8Q9P0V8 285 aa6.8□□□□□ -1.32
SMCHD1-213ENST00000609587 ST14Q9Y5Y6 855 aa6.8□□□□□ -1.32
SMCHD1-213ENST00000609587 ROBO2Q9HCK4 1378 aa6.8□□□□□ -1.32
SMCHD1-213ENST00000609587 FAM155AB1AL88 458 aaPredicted RBP6.79□□□□□ -1.32
SMCHD1-213ENST00000609587 TLR3O15455 904 aaKnown RBP6.79□□□□□ -1.32
SMCHD1-213ENST00000609587 FOXD2O60548 495 aaPredicted RBP6.79□□□□□ -1.32
SMCHD1-213ENST00000609587 SLITRK5O94991 958 aa6.79□□□□□ -1.32
SMCHD1-213ENST00000609587 SRFP11831 508 aa6.79□□□□□ -1.32
SMCHD1-213ENST00000609587 ERVFC1P60507 584 aa6.79□□□□□ -1.32
SMCHD1-213ENST00000609587 PDE4BQ07343 736 aa6.79□□□□□ -1.32
SMCHD1-213ENST00000609587 MFSD2AQ8NA29 543 aa6.79□□□□□ -1.32
SMCHD1-213ENST00000609587 FBXO27Q8NI29 283 aa6.79□□□□□ -1.32
SMCHD1-213ENST00000609587 RASGRP4Q8TDF6 673 aa6.79□□□□□ -1.32
SMCHD1-213ENST00000609587 NKD1Q969G9 470 aa6.79□□□□□ -1.32
SMCHD1-213ENST00000609587 SPATA32Q96LK8 384 aa6.79□□□□□ -1.32
SMCHD1-213ENST00000609587 RBAK-RBAKDNI3L0D1 243 aa6.78□□□□□ -1.32
SMCHD1-213ENST00000609587 DNAJA1P31689 397 aaKnown RBP6.78□□□□□ -1.32
SMCHD1-213ENST00000609587 CRKP46108 304 aa6.78□□□□□ -1.32
SMCHD1-213ENST00000609587 ARID5AQ03989 594 aa6.78□□□□□ -1.32
SMCHD1-213ENST00000609587 MPP2Q14168 576 aa6.78□□□□□ -1.32
SMCHD1-213ENST00000609587 NKG7Q16617 165 aa6.78□□□□□ -1.32
SMCHD1-213ENST00000609587 MRPL41Q8IXM3 137 aaKnown RBP6.78□□□□□ -1.32
SMCHD1-213ENST00000609587 CCDC120Q96HB5 630 aa6.78□□□□□ -1.32
SMCHD1-213ENST00000609587 LRRC3Q9BY71 257 aa6.78□□□□□ -1.32
SMCHD1-213ENST00000609587 ADAM30Q9UKF2 790 aa6.78□□□□□ -1.32
SMCHD1-213ENST00000609587 CAPN6Q9Y6Q1 641 aa6.78□□□□□ -1.32
SMCHD1-213ENST00000609587 PRR36Q9H6K5 1346 aa6.77□□□□□ -1.32
SMCHD1-213ENST00000609587 DNAJC25-GNG10A0A024R161 153 aa6.77□□□□□ -1.33
SMCHD1-213ENST00000609587 CST3P01034 146 aaPredicted RBP6.77□□□□□ -1.33
SMCHD1-213ENST00000609587 PGRP06401 933 aa6.77□□□□□ -1.33
SMCHD1-213ENST00000609587 RAC2P15153 192 aa6.77□□□□□ -1.33
SMCHD1-213ENST00000609587 CWF19L2Q2TBE0 894 aaKnown RBP6.77□□□□□ -1.33
SMCHD1-213ENST00000609587 SEZ6Q53EL9 994 aa6.77□□□□□ -1.33
SMCHD1-213ENST00000609587 RALGPS1Q5JS13 557 aa6.77□□□□□ -1.33
SMCHD1-213ENST00000609587 TTC6Q86TZ1 520 aa6.77□□□□□ -1.33
SMCHD1-213ENST00000609587 MCATQ8IVS2 390 aaKnown RBP6.77□□□□□ -1.33
SMCHD1-213ENST00000609587 SREK1Q8WXA9 508 aaKnown RBP6.77□□□□□ -1.33
SMCHD1-213ENST00000609587 KCNC2Q96PR1 638 aa6.77□□□□□ -1.33
SMCHD1-213ENST00000609587 ZCCHC4Q9H5U6 513 aa6.77□□□□□ -1.33
SMCHD1-213ENST00000609587 TJP2Q9UDY2 1190 aa6.77□□□□□ -1.33
SMCHD1-213ENST00000609587 BMP7P18075 431 aa6.76□□□□□ -1.33
SMCHD1-213ENST00000609587 ATF4P18848 351 aaPredicted RBP6.76□□□□□ -1.33
SMCHD1-213ENST00000609587 SF3A1Q15459 793 aaKnown RBP6.76□□□□□ -1.33
SMCHD1-213ENST00000609587 TMEM201Q5SNT2 666 aa6.76□□□□□ -1.33
SMCHD1-213ENST00000609587 SLC6A19Q695T7 634 aa6.76□□□□□ -1.33
SMCHD1-213ENST00000609587 REC114Q7Z4M0 266 aa6.76□□□□□ -1.33
SMCHD1-213ENST00000609587 THAP5Q7Z6K1 395 aa6.76□□□□□ -1.33
SMCHD1-213ENST00000609587 SLITRK4Q8IW52 837 aa6.76□□□□□ -1.33
SMCHD1-213ENST00000609587 KCNN1Q92952 543 aa6.76□□□□□ -1.33
SMCHD1-213ENST00000609587 TANGO6Q9C0B7 1094 aa6.76□□□□□ -1.33
SMCHD1-213ENST00000609587 EFR3BQ9Y2G0 817 aa6.76□□□□□ -1.33
SMCHD1-213ENST00000609587 MCM4P33991 863 aa6.75□□□□□ -1.33
SMCHD1-213ENST00000609587 COL9A2Q14055 689 aaPredicted RBP6.75□□□□□ -1.33
SMCHD1-213ENST00000609587 SFRP5Q5T4F7 317 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms