RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 SNRKQ9NRH2 765 aa16.28■□□□□ 0.2
CTSA-212ENST00000606394 TRIM43BA6NCK2 446 aa16.27■□□□□ 0.2
CTSA-212ENST00000606394 GNAI2P04899 355 aa16.27■□□□□ 0.2
CTSA-212ENST00000606394 COG2Q14746 738 aa16.27■□□□□ 0.2
CTSA-212ENST00000606394 MB21D1Q8N884 522 aa16.27■□□□□ 0.2
CTSA-212ENST00000606394 TRIM43Q96BQ3 446 aaPredicted RBP16.27■□□□□ 0.2
CTSA-212ENST00000606394 MOV10L1Q9BXT6 1211 aaKnown RBP16.27■□□□□ 0.2
CTSA-212ENST00000606394 NRBP1Q9UHY1 535 aa16.27■□□□□ 0.2
CTSA-212ENST00000606394 MYH1P12882 1939 aa16.27■□□□□ 0.19
CTSA-212ENST00000606394 ADCYAP1R1P41586 468 aa16.26■□□□□ 0.19
CTSA-212ENST00000606394 USP5P45974 858 aa16.26■□□□□ 0.19
CTSA-212ENST00000606394 LRRC41Q15345 812 aa16.26■□□□□ 0.19
CTSA-212ENST00000606394 ACER1Q8TDN7 264 aa16.26■□□□□ 0.19
CTSA-212ENST00000606394 RNPC3Q96LT9 517 aaKnown RBP16.26■□□□□ 0.19
CTSA-212ENST00000606394 SPATC1LQ9H0A9 340 aa16.26■□□□□ 0.19
CTSA-212ENST00000606394 MROH8Q9H579 483 aa16.26■□□□□ 0.19
CTSA-212ENST00000606394 TNFRSF10AO00220 468 aa16.25■□□□□ 0.19
CTSA-212ENST00000606394 KIAA0355O15063 1070 aa16.25■□□□□ 0.19
CTSA-212ENST00000606394 CLTBP09497 229 aa16.25■□□□□ 0.19
CTSA-212ENST00000606394 CYP7A1P22680 504 aa16.25■□□□□ 0.19
CTSA-212ENST00000606394 TLE2Q04725 743 aa16.25■□□□□ 0.19
CTSA-212ENST00000606394 TNNI3KQ59H18 835 aa16.25■□□□□ 0.19
CTSA-212ENST00000606394 SH3RF1Q7Z6J0 888 aa16.25■□□□□ 0.19
CTSA-212ENST00000606394 CDCA7LQ96GN5 454 aa16.25■□□□□ 0.19
CTSA-212ENST00000606394 PHF24Q9UPV7 400 aa16.25■□□□□ 0.19
CTSA-212ENST00000606394 FPGT-TNNI3KV9GXZ4 949 aa16.25■□□□□ 0.19
CTSA-212ENST00000606394 PNMA6EA0A0J9YXQ4 647 aa16.24■□□□□ 0.19
CTSA-212ENST00000606394 ERCC3P19447 782 aa16.24■□□□□ 0.19
CTSA-212ENST00000606394 DYNLL1P63167 89 aaKnown RBP16.24■□□□□ 0.19
CTSA-212ENST00000606394 DBNDD2Q9BQY9 259 aa16.24■□□□□ 0.19
CTSA-212ENST00000606394 CHD9Q3L8U1 2897 aa16.23■□□□□ 0.19
CTSA-212ENST00000606394 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.23■□□□□ 0.19
CTSA-212ENST00000606394 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.23■□□□□ 0.19
CTSA-212ENST00000606394 COBLO75128 1261 aa16.23■□□□□ 0.19
CTSA-212ENST00000606394 MYCNP04198 464 aaPredicted RBP16.23■□□□□ 0.19
CTSA-212ENST00000606394 RAG1P15918 1043 aa16.23■□□□□ 0.19
CTSA-212ENST00000606394 COL9A1P20849 921 aa16.23■□□□□ 0.19
CTSA-212ENST00000606394 SHMT1P34896 483 aa16.23■□□□□ 0.19
CTSA-212ENST00000606394 ZAP70P43403 619 aa16.23■□□□□ 0.19
CTSA-212ENST00000606394 FAM47AQ5JRC9 791 aa16.23■□□□□ 0.19
CTSA-212ENST00000606394 ANO1Q5XXA6 986 aa16.23■□□□□ 0.19
CTSA-212ENST00000606394 RNF180Q86T96 592 aa16.23■□□□□ 0.19
CTSA-212ENST00000606394 FERMT2Q96AC1 680 aa16.23■□□□□ 0.19
CTSA-212ENST00000606394 MAML3Q96JK9 1138 aa16.23■□□□□ 0.19
CTSA-212ENST00000606394 PIH1D3Q9NQM4 214 aaKnown RBP16.23■□□□□ 0.19
CTSA-212ENST00000606394 ROBO3Q96MS0 1386 aa16.23■□□□□ 0.19
CTSA-212ENST00000606394 MYO5AQ9Y4I1 1855 aaKnown RBP16.22■□□□□ 0.19
CTSA-212ENST00000606394 A0A0G2JMZ2 1700 aa16.22■□□□□ 0.19
CTSA-212ENST00000606394 RARBP10826 455 aa16.22■□□□□ 0.19
CTSA-212ENST00000606394 DNAJB2P25686 324 aa16.22■□□□□ 0.19
CTSA-212ENST00000606394 GUCY1A2P33402 732 aa16.22■□□□□ 0.19
CTSA-212ENST00000606394 RARSP54136 660 aaKnown RBP16.22■□□□□ 0.19
CTSA-212ENST00000606394 FPGSQ05932 587 aa16.22■□□□□ 0.19
CTSA-212ENST00000606394 GRIN2CQ14957 1233 aa16.22■□□□□ 0.19
CTSA-212ENST00000606394 TOX2Q96NM4 488 aa16.22■□□□□ 0.19
CTSA-212ENST00000606394 XPNPEP3Q9NQH7 507 aa16.22■□□□□ 0.19
CTSA-212ENST00000606394 IPO8O15397 1037 aaKnown RBP16.21■□□□□ 0.19
CTSA-212ENST00000606394 IDH1O75874 414 aaKnown RBP16.21■□□□□ 0.19
CTSA-212ENST00000606394 FCER1AP12319 257 aa16.21■□□□□ 0.19
CTSA-212ENST00000606394 ITGB8P26012 769 aa16.21■□□□□ 0.19
CTSA-212ENST00000606394 MIGA1Q8NAN2 632 aa16.21■□□□□ 0.19
CTSA-212ENST00000606394 ATXN2LQ8WWM7 1075 aaKnown RBP16.21■□□□□ 0.19
CTSA-212ENST00000606394 TANGO6Q9C0B7 1094 aa16.21■□□□□ 0.19
CTSA-212ENST00000606394 TSHZ2Q9NRE2 1034 aa16.21■□□□□ 0.19
CTSA-212ENST00000606394 RCAN3Q9UKA8 241 aa16.21■□□□□ 0.19
CTSA-212ENST00000606394 SLC25A27O95847 323 aa16.2■□□□□ 0.18
CTSA-212ENST00000606394 DSG3P32926 999 aa16.2■□□□□ 0.18
CTSA-212ENST00000606394 PLCD1P51178 756 aa16.2■□□□□ 0.18
CTSA-212ENST00000606394 EPHB4P54760 987 aa16.2■□□□□ 0.18
CTSA-212ENST00000606394 GABPAQ06546 454 aa16.2■□□□□ 0.18
CTSA-212ENST00000606394 MAP3K12Q12852 859 aa16.2■□□□□ 0.18
CTSA-212ENST00000606394 OS9Q13438 667 aaPredicted RBP16.2■□□□□ 0.18
CTSA-212ENST00000606394 POLA2Q14181 598 aa16.2■□□□□ 0.18
CTSA-212ENST00000606394 SEPT2Q15019 361 aa16.2■□□□□ 0.18
CTSA-212ENST00000606394 PRAMEF19Q5SWL8 479 aa16.2■□□□□ 0.18
CTSA-212ENST00000606394 ANKRD33Q7Z3H0 272 aa16.2■□□□□ 0.18
CTSA-212ENST00000606394 TSEN34Q9BSV6 310 aaKnown RBP16.2■□□□□ 0.18
CTSA-212ENST00000606394 ZNF576Q9H609 170 aa16.2■□□□□ 0.18
CTSA-212ENST00000606394 DIS3Q9Y2L1 958 aaKnown RBP16.2■□□□□ 0.18
CTSA-212ENST00000606394 SMCHD1A6NHR9 2005 aa16.19■□□□□ 0.18
CTSA-212ENST00000606394 A0A1W2PQ45 241 aaPredicted RBP16.19■□□□□ 0.18
CTSA-212ENST00000606394 A0A1W2PQY0 241 aa16.19■□□□□ 0.18
CTSA-212ENST00000606394 A0A1W2PRG0 241 aa16.19■□□□□ 0.18
CTSA-212ENST00000606394 RRP1P56182 461 aaKnown RBP16.19■□□□□ 0.18
CTSA-212ENST00000606394 AKNAD1Q5T1N1 836 aa16.19■□□□□ 0.18
CTSA-212ENST00000606394 CCDC174Q6PII3 467 aa16.19■□□□□ 0.18
CTSA-212ENST00000606394 NCAPG2Q86XI2 1143 aa16.19■□□□□ 0.18
CTSA-212ENST00000606394 MAGEB6Q8N7X4 407 aa16.19■□□□□ 0.18
CTSA-212ENST00000606394 USP38Q8NB14 1042 aa16.19■□□□□ 0.18
CTSA-212ENST00000606394 SSH3Q8TE77 659 aa16.19■□□□□ 0.18
CTSA-212ENST00000606394 TIFAQ96CG3 184 aa16.19■□□□□ 0.18
CTSA-212ENST00000606394 TMEM39AQ9NV64 488 aa16.19■□□□□ 0.18
CTSA-212ENST00000606394 DCDC2CA8MYV0 355 aa16.18■□□□□ 0.18
CTSA-212ENST00000606394 PQBP1O60828 265 aaKnown RBP16.18■□□□□ 0.18
CTSA-212ENST00000606394 PLS1Q14651 629 aa16.18■□□□□ 0.18
CTSA-212ENST00000606394 TMEM179Q6ZVK1 233 aa16.18■□□□□ 0.18
CTSA-212ENST00000606394 NUP133Q8WUM0 1156 aa16.18■□□□□ 0.18
CTSA-212ENST00000606394 GAS2L1Q99501 681 aaPredicted RBP16.18■□□□□ 0.18
CTSA-212ENST00000606394 TINF2Q9BSI4 451 aa16.18■□□□□ 0.18
CTSA-212ENST00000606394 SH2D4AQ9H788 454 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms