RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 TTLL1O95922 423 aa16.84■□□□□ 0.29
CTSA-211ENST00000606066 OSBPP22059 807 aa16.84■□□□□ 0.29
CTSA-211ENST00000606066 TAF1CQ15572 869 aaPredicted RBP16.84■□□□□ 0.29
CTSA-211ENST00000606066 ZYXQ15942 572 aaKnown RBP16.84■□□□□ 0.29
CTSA-211ENST00000606066 SIAH1Q8IUQ4 282 aa16.84■□□□□ 0.29
CTSA-211ENST00000606066 LPAR1Q92633 364 aa16.84■□□□□ 0.29
CTSA-211ENST00000606066 CEP95Q96GE4 821 aa16.84■□□□□ 0.29
CTSA-211ENST00000606066 PARK7Q99497 189 aaKnown RBP16.84■□□□□ 0.29
CTSA-211ENST00000606066 EMILIN3Q9NT22 766 aa16.84■□□□□ 0.29
CTSA-211ENST00000606066 TCP11L1Q9NUJ3 509 aa16.84■□□□□ 0.29
CTSA-211ENST00000606066 CLIP2Q9UDT6 1046 aa16.84■□□□□ 0.29
CTSA-211ENST00000606066 SYNPO2Q9UMS6 1093 aa16.84■□□□□ 0.29
CTSA-211ENST00000606066 TACC3Q9Y6A5 838 aa16.84■□□□□ 0.29
CTSA-211ENST00000606066 EPB41L2O43491 1005 aaKnown RBP16.83■□□□□ 0.28
CTSA-211ENST00000606066 NECTIN1Q15223 517 aa16.83■□□□□ 0.28
CTSA-211ENST00000606066 CCDC178Q5BJE1 867 aa16.83■□□□□ 0.28
CTSA-211ENST00000606066 IQCA1Q86XH1 822 aa16.83■□□□□ 0.28
CTSA-211ENST00000606066 CLEC10AQ8IUN9 316 aa16.83■□□□□ 0.28
CTSA-211ENST00000606066 MKL1Q969V6 931 aa16.83■□□□□ 0.28
CTSA-211ENST00000606066 ARMC5Q96C12 935 aa16.83■□□□□ 0.28
CTSA-211ENST00000606066 GOPCQ9HD26 462 aa16.83■□□□□ 0.28
CTSA-211ENST00000606066 STX8Q9UNK0 236 aa16.83■□□□□ 0.28
CTSA-211ENST00000606066 CENPFP49454 3210 aa16.83■□□□□ 0.28
CTSA-211ENST00000606066 NEDD4P46934 1319 aa16.82■□□□□ 0.28
CTSA-211ENST00000606066 HOXA7P31268 230 aaPredicted RBP16.82■□□□□ 0.28
CTSA-211ENST00000606066 SP3Q02447 781 aa16.82■□□□□ 0.28
CTSA-211ENST00000606066 CRHR2Q13324 411 aa16.82■□□□□ 0.28
CTSA-211ENST00000606066 TREML2Q5T2D2 321 aa16.82■□□□□ 0.28
CTSA-211ENST00000606066 CREB3L3Q68CJ9 461 aa16.82■□□□□ 0.28
CTSA-211ENST00000606066 RALYLQ86SE5 291 aaKnown RBP16.82■□□□□ 0.28
CTSA-211ENST00000606066 VCPKMTQ9H867 229 aa16.82■□□□□ 0.28
CTSA-211ENST00000606066 EFCC1Q9HA90 598 aa16.82■□□□□ 0.28
CTSA-211ENST00000606066 POTEFA5A3E0 1075 aa16.81■□□□□ 0.28
CTSA-211ENST00000606066 B4E1Z4 1266 aa16.81■□□□□ 0.28
CTSA-211ENST00000606066 USP17L15C9J2P7 530 aa16.81■□□□□ 0.28
CTSA-211ENST00000606066 USP17L13C9JLJ4 530 aa16.81■□□□□ 0.28
CTSA-211ENST00000606066 USP17L11C9JVI0 530 aa16.81■□□□□ 0.28
CTSA-211ENST00000606066 USP17L18D6R9N7 530 aa16.81■□□□□ 0.28
CTSA-211ENST00000606066 USP17L22D6RA61 530 aa16.81■□□□□ 0.28
CTSA-211ENST00000606066 USP17L17D6RBQ6 530 aa16.81■□□□□ 0.28
CTSA-211ENST00000606066 USP17L19D6RCP7 530 aa16.81■□□□□ 0.28
CTSA-211ENST00000606066 USP17L20D6RJB6 530 aa16.81■□□□□ 0.28
CTSA-211ENST00000606066 E7EWF7 191 aa16.81■□□□□ 0.28
CTSA-211ENST00000606066 SLC27A2O14975 620 aa16.81■□□□□ 0.28
CTSA-211ENST00000606066 KDM4AO75164 1064 aa16.81■□□□□ 0.28
CTSA-211ENST00000606066 ZKSCAN1P17029 563 aaPredicted RBP16.81■□□□□ 0.28
CTSA-211ENST00000606066 VCAM1P19320 739 aa16.81■□□□□ 0.28
CTSA-211ENST00000606066 IRX3P78415 501 aaPredicted RBP16.81■□□□□ 0.28
CTSA-211ENST00000606066 USP17L24Q0WX57 530 aa16.81■□□□□ 0.28
CTSA-211ENST00000606066 NCOA7Q8NI08 942 aa16.81■□□□□ 0.28
CTSA-211ENST00000606066 SMCR8Q8TEV9 937 aaPredicted RBP16.81■□□□□ 0.28
CTSA-211ENST00000606066 TTC14Q96N46 770 aa16.81■□□□□ 0.28
CTSA-211ENST00000606066 IL17RBQ9NRM6 502 aa16.81■□□□□ 0.28
CTSA-211ENST00000606066 ATAD5Q96QE3 1844 aa16.81■□□□□ 0.28
CTSA-211ENST00000606066 RAD21O60216 631 aa16.8■□□□□ 0.28
CTSA-211ENST00000606066 TLR2O60603 784 aa16.8■□□□□ 0.28
CTSA-211ENST00000606066 NOVP48745 357 aa16.8■□□□□ 0.28
CTSA-211ENST00000606066 ARHGEF6Q15052 776 aa16.8■□□□□ 0.28
CTSA-211ENST00000606066 UBAC1Q9BSL1 405 aa16.8■□□□□ 0.28
CTSA-211ENST00000606066 ZSWIM5Q9P217 1185 aa16.8■□□□□ 0.28
CTSA-211ENST00000606066 F5H6K3 240 aa16.79■□□□□ 0.28
CTSA-211ENST00000606066 WDR46O15213 610 aaKnown RBP16.79■□□□□ 0.28
CTSA-211ENST00000606066 NMT2O60551 498 aa16.79■□□□□ 0.28
CTSA-211ENST00000606066 CYP2C8P10632 490 aa16.79■□□□□ 0.28
CTSA-211ENST00000606066 KLRC3Q07444 240 aa16.79■□□□□ 0.28
CTSA-211ENST00000606066 DGKHQ86XP1 1220 aa16.79■□□□□ 0.28
CTSA-211ENST00000606066 GMCL1P1Q8NEA9 526 aa16.79■□□□□ 0.28
CTSA-211ENST00000606066 CD99L2Q8TCZ2 262 aa16.79■□□□□ 0.28
CTSA-211ENST00000606066 ASCC2Q9H1I8 757 aaPredicted RBP16.79■□□□□ 0.28
CTSA-211ENST00000606066 RPAP3Q9H6T3 665 aaPredicted RBP16.79■□□□□ 0.28
CTSA-211ENST00000606066 BRCA2P51587 3418 aa16.79■□□□□ 0.28
CTSA-211ENST00000606066 PHIPQ8WWQ0 1821 aa16.79■□□□□ 0.28
CTSA-211ENST00000606066 TOP1P11387 765 aaKnown RBP16.78■□□□□ 0.28
CTSA-211ENST00000606066 GCLCP48506 637 aaPredicted RBP16.78■□□□□ 0.28
CTSA-211ENST00000606066 KRT32Q14532 448 aa16.78■□□□□ 0.28
CTSA-211ENST00000606066 SART3Q15020 963 aaKnown RBP16.78■□□□□ 0.28
CTSA-211ENST00000606066 HABP4Q5JVS0 413 aaKnown RBP16.78■□□□□ 0.28
CTSA-211ENST00000606066 CATSPERGQ6ZRH7 1159 aa16.78■□□□□ 0.28
CTSA-211ENST00000606066 SPICE1Q8N0Z3 855 aa16.78■□□□□ 0.28
CTSA-211ENST00000606066 LRRC47Q8N1G4 583 aaKnown RBP16.78■□□□□ 0.28
CTSA-211ENST00000606066 GTF3C2Q8WUA4 911 aaPredicted RBP16.78■□□□□ 0.28
CTSA-211ENST00000606066 ZSCAN10Q96SZ4 725 aaPredicted RBP16.78■□□□□ 0.28
CTSA-211ENST00000606066 ERICH2A1L162 156 aa16.77■□□□□ 0.28
CTSA-211ENST00000606066 NDUFB10O96000 172 aa16.77■□□□□ 0.28
CTSA-211ENST00000606066 MCCP23508 829 aa16.77■□□□□ 0.28
CTSA-211ENST00000606066 HSPA4P34932 840 aa16.77■□□□□ 0.28
CTSA-211ENST00000606066 TSGA10IPQ3SY00 556 aa16.77■□□□□ 0.28
CTSA-211ENST00000606066 SLFN13Q68D06 897 aa16.77■□□□□ 0.28
CTSA-211ENST00000606066 TMEM47Q9BQJ4 181 aa16.77■□□□□ 0.28
CTSA-211ENST00000606066 ZKSCAN3Q9BRR0 538 aa16.77■□□□□ 0.28
CTSA-211ENST00000606066 TANGO6Q9C0B7 1094 aa16.77■□□□□ 0.28
CTSA-211ENST00000606066 HOXC10Q9NYD6 342 aa16.77■□□□□ 0.28
CTSA-211ENST00000606066 MYH8P13535 1937 aa16.76■□□□□ 0.27
CTSA-211ENST00000606066 EN2P19622 333 aaPredicted RBP16.76■□□□□ 0.27
CTSA-211ENST00000606066 CAP1Q01518 475 aa16.76■□□□□ 0.27
CTSA-211ENST00000606066 COG2Q14746 738 aa16.76■□□□□ 0.27
CTSA-211ENST00000606066 KIAA1755Q5JYT7 1200 aa16.76■□□□□ 0.27
CTSA-211ENST00000606066 C17orf99Q6UX52 265 aa16.76■□□□□ 0.27
CTSA-211ENST00000606066 STOX1Q6ZVD7 989 aa16.76■□□□□ 0.27
CTSA-211ENST00000606066 ANKS1AQ92625 1134 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms