RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 CDK5RAP2Q96SN8 1893 aa22.74■■□□□ 1.23
MMP28-201ENST00000605424 DDX60LQ5H9U9 1706 aaKnown RBP22.74■■□□□ 1.23
MMP28-201ENST00000605424 SRGNP10124 158 aa22.74■■□□□ 1.23
MMP28-201ENST00000605424 PLCD1P51178 756 aa22.74■■□□□ 1.23
MMP28-201ENST00000605424 CCDC34Q96HJ3 373 aa22.74■■□□□ 1.23
MMP28-201ENST00000605424 LZTS2Q9BRK4 669 aa22.74■■□□□ 1.23
MMP28-201ENST00000605424 ANKRD31Q8N7Z5 1873 aa22.74■■□□□ 1.23
MMP28-201ENST00000605424 NEMFO60524 1076 aa22.73■■□□□ 1.23
MMP28-201ENST00000605424 RASA1P20936 1047 aa22.73■■□□□ 1.23
MMP28-201ENST00000605424 PTGS1P23219 599 aa22.73■■□□□ 1.23
MMP28-201ENST00000605424 RHBDL3P58872 404 aa22.73■■□□□ 1.23
MMP28-201ENST00000605424 METTL16Q86W50 562 aaKnown RBP22.73■■□□□ 1.23
MMP28-201ENST00000605424 A0A087WWV3 80 aa22.72■■□□□ 1.23
MMP28-201ENST00000605424 hCG_1642624A0A1W2PR95 340 aa22.72■■□□□ 1.23
MMP28-201ENST00000605424 PDE6BP35913 854 aa22.72■■□□□ 1.23
MMP28-201ENST00000605424 NLRP5P59047 1200 aa22.72■■□□□ 1.23
MMP28-201ENST00000605424 MDM2Q00987 491 aaPredicted RBP22.72■■□□□ 1.23
MMP28-201ENST00000605424 FLT1P17948 1338 aa22.72■■□□□ 1.23
MMP28-201ENST00000605424 MYO1BO43795 1136 aa22.72■■□□□ 1.23
MMP28-201ENST00000605424 TPM2P07951 284 aa22.72■■□□□ 1.23
MMP28-201ENST00000605424 PDGFDQ9GZP0 370 aaPredicted RBP22.72■■□□□ 1.23
MMP28-201ENST00000605424 BIN1O00499 593 aa22.71■■□□□ 1.23
MMP28-201ENST00000605424 CDK8P49336 464 aa22.71■■□□□ 1.23
MMP28-201ENST00000605424 PNOCQ13519 176 aa22.71■■□□□ 1.23
MMP28-201ENST00000605424 SLC15A2Q16348 729 aa22.71■■□□□ 1.23
MMP28-201ENST00000605424 NT5DC1Q5TFE4 455 aa22.71■■□□□ 1.23
MMP28-201ENST00000605424 COL23A1Q86Y22 540 aaPredicted RBP22.71■■□□□ 1.23
MMP28-201ENST00000605424 NEDD1Q8NHV4 660 aa22.71■■□□□ 1.23
MMP28-201ENST00000605424 ZC3H12CQ9C0D7 883 aaKnown RBP22.71■■□□□ 1.23
MMP28-201ENST00000605424 SLC4A8Q2Y0W8 1093 aa22.7■■□□□ 1.23
MMP28-201ENST00000605424 TTC38Q5R3I4 469 aa22.7■■□□□ 1.23
MMP28-201ENST00000605424 GALNT17Q6IS24 598 aa22.7■■□□□ 1.23
MMP28-201ENST00000605424 OLFM4Q6UX06 510 aa22.7■■□□□ 1.23
MMP28-201ENST00000605424 TMX4Q9H1E5 349 aaPredicted RBP22.7■■□□□ 1.23
MMP28-201ENST00000605424 SAP30BPQ9UHR5 308 aaKnown RBP22.7■■□□□ 1.23
MMP28-201ENST00000605424 MAD2L2Q9UI95 211 aa22.7■■□□□ 1.23
MMP28-201ENST00000605424 USP17L3A6NCW0 530 aa22.7■■□□□ 1.22
MMP28-201ENST00000605424 USP17L4A6NCW7 530 aa22.7■■□□□ 1.22
MMP28-201ENST00000605424 POLR2DO15514 142 aaKnown RBP22.7■■□□□ 1.22
MMP28-201ENST00000605424 ATP2B1P20020 1258 aa22.7■■□□□ 1.22
MMP28-201ENST00000605424 GRIN1Q05586 938 aa22.7■■□□□ 1.22
MMP28-201ENST00000605424 DHX8Q14562 1220 aaKnown RBP22.7■■□□□ 1.22
MMP28-201ENST00000605424 EARS2Q5JPH6 523 aaKnown RBP22.7■■□□□ 1.22
MMP28-201ENST00000605424 USP17L1Q7RTZ2 530 aa22.7■■□□□ 1.22
MMP28-201ENST00000605424 TRIML1Q8N9V2 468 aa22.7■■□□□ 1.22
MMP28-201ENST00000605424 FBXW7Q969H0 707 aa22.7■■□□□ 1.22
MMP28-201ENST00000605424 CSRNP2Q9H175 543 aa22.7■■□□□ 1.22
MMP28-201ENST00000605424 GTF2IP78347 998 aa22.69■■□□□ 1.22
MMP28-201ENST00000605424 NCAPHQ15003 741 aa22.69■■□□□ 1.22
MMP28-201ENST00000605424 POSTNQ15063 836 aa22.69■■□□□ 1.22
MMP28-201ENST00000605424 EYA3Q99504 573 aa22.69■■□□□ 1.22
MMP28-201ENST00000605424 TMEM47Q9BQJ4 181 aa22.69■■□□□ 1.22
MMP28-201ENST00000605424 PCDHA5Q9Y5H7 936 aa22.69■■□□□ 1.22
MMP28-201ENST00000605424 FOCADQ5VW36 1801 aa22.69■■□□□ 1.22
MMP28-201ENST00000605424 PALM3A6NDB9 673 aaPredicted RBP22.69■■□□□ 1.22
MMP28-201ENST00000605424 ATP2C1P98194 919 aaPredicted RBP22.69■■□□□ 1.22
MMP28-201ENST00000605424 SPECC1Q5M775 1068 aa22.69■■□□□ 1.22
MMP28-201ENST00000605424 MASTLQ96GX5 879 aa22.69■■□□□ 1.22
MMP28-201ENST00000605424 IMPACTQ9P2X3 320 aa22.69■■□□□ 1.22
MMP28-201ENST00000605424 NRBP1Q9UHY1 535 aa22.69■■□□□ 1.22
MMP28-201ENST00000605424 DAGLAQ9Y4D2 1042 aa22.69■■□□□ 1.22
MMP28-201ENST00000605424 PARP3Q9Y6F1 533 aa22.69■■□□□ 1.22
MMP28-201ENST00000605424 FAM205CA6NFA0 338 aa22.68■■□□□ 1.22
MMP28-201ENST00000605424 SMARCA1P28370 1054 aa22.68■■□□□ 1.22
MMP28-201ENST00000605424 NOVP48745 357 aa22.68■■□□□ 1.22
MMP28-201ENST00000605424 SLC44A5Q8NCS7 719 aa22.68■■□□□ 1.22
MMP28-201ENST00000605424 CCDC148Q8NFR7 591 aa22.68■■□□□ 1.22
MMP28-201ENST00000605424 PYCARDQ9ULZ3 195 aa22.68■■□□□ 1.22
MMP28-201ENST00000605424 QSER1Q2KHR3 1735 aa22.68■■□□□ 1.22
MMP28-201ENST00000605424 MYH1P12882 1939 aa22.68■■□□□ 1.22
MMP28-201ENST00000605424 SNED1Q8TER0 1413 aa22.67■■□□□ 1.22
MMP28-201ENST00000605424 SARSP49591 514 aaKnown RBP22.67■■□□□ 1.22
MMP28-201ENST00000605424 MYL5Q02045 173 aa22.67■■□□□ 1.22
MMP28-201ENST00000605424 FOXP4Q8IVH2 680 aaPredicted RBP22.67■■□□□ 1.22
MMP28-201ENST00000605424 BLIDQ8IZY5 108 aa22.67■■□□□ 1.22
MMP28-201ENST00000605424 PYM1Q9BRP8 204 aaKnown RBP22.67■■□□□ 1.22
MMP28-201ENST00000605424 SERTAD1Q9UHV2 236 aa22.67■■□□□ 1.22
MMP28-201ENST00000605424 DACH1Q9UI36 760 aa22.67■■□□□ 1.22
MMP28-201ENST00000605424 PCDHA4Q9UN74 947 aa22.67■■□□□ 1.22
MMP28-201ENST00000605424 STX8Q9UNK0 236 aa22.67■■□□□ 1.22
MMP28-201ENST00000605424 R3HCC1Q9Y3T6 440 aaKnown RBP22.67■■□□□ 1.22
MMP28-201ENST00000605424 ACTN4O43707 911 aaKnown RBP22.67■■□□□ 1.22
MMP28-201ENST00000605424 GSDMDP57764 484 aa22.67■■□□□ 1.22
MMP28-201ENST00000605424 DPP8Q6V1X1 898 aaPredicted RBP22.67■■□□□ 1.22
MMP28-201ENST00000605424 STAG2Q8N3U4 1231 aa22.67■■□□□ 1.22
MMP28-201ENST00000605424 DAGLBQ8NCG7 672 aa22.67■■□□□ 1.22
MMP28-201ENST00000605424 MLKLQ8NB16 471 aa22.66■■□□□ 1.22
MMP28-201ENST00000605424 SMARCE1Q969G3 411 aa22.66■■□□□ 1.22
MMP28-201ENST00000605424 SPZ1Q9BXG8 430 aa22.66■■□□□ 1.22
MMP28-201ENST00000605424 STK32BQ9NY57 414 aa22.66■■□□□ 1.22
MMP28-201ENST00000605424 RIMBP2O15034 1052 aa22.65■■□□□ 1.22
MMP28-201ENST00000605424 TOP1P11387 765 aaKnown RBP22.65■■□□□ 1.22
MMP28-201ENST00000605424 CT47A1Q5JQC4 288 aaPredicted RBP22.65■■□□□ 1.22
MMP28-201ENST00000605424 DNTTIP2Q5QJE6 756 aaKnown RBP22.65■■□□□ 1.22
MMP28-201ENST00000605424 ARL6IP4Q66PJ3 421 aaKnown RBP22.65■■□□□ 1.22
MMP28-201ENST00000605424 PIK3AP1Q6ZUJ8 805 aa22.65■■□□□ 1.22
MMP28-201ENST00000605424 LRRC8AQ8IWT6 810 aa22.65■■□□□ 1.22
MMP28-201ENST00000605424 SPATA20Q8TB22 786 aa22.65■■□□□ 1.22
MMP28-201ENST00000605424 PLIN4Q96Q06 1357 aa22.65■■□□□ 1.22
MMP28-201ENST00000605424 PTGDRQ13258 359 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms