RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 CATSPERGQ6ZRH7 1159 aa22.84■■□□□ 1.25
SRSF4-206ENST00000605204 NBPF11Q86T75 865 aa22.84■■□□□ 1.25
SRSF4-206ENST00000605204 GOPCQ9HD26 462 aa22.84■■□□□ 1.25
SRSF4-206ENST00000605204 TNPO2O14787 897 aaKnown RBP22.83■■□□□ 1.25
SRSF4-206ENST00000605204 HSPD1P10809 573 aaKnown RBP22.83■■□□□ 1.25
SRSF4-206ENST00000605204 PCP11498 1178 aaKnown RBP22.83■■□□□ 1.25
SRSF4-206ENST00000605204 NT5C2P49902 561 aa22.83■■□□□ 1.25
SRSF4-206ENST00000605204 GPRC5AQ8NFJ5 357 aa22.83■■□□□ 1.25
SRSF4-206ENST00000605204 P2RX7Q99572 595 aaKnown RBP22.83■■□□□ 1.25
SRSF4-206ENST00000605204 RPAP3Q9H6T3 665 aaPredicted RBP22.83■■□□□ 1.25
SRSF4-206ENST00000605204 NYAP2Q9P242 653 aa22.83■■□□□ 1.25
SRSF4-206ENST00000605204 MGAMO43451 1857 aa22.83■■□□□ 1.24
SRSF4-206ENST00000605204 MYPNQ86TC9 1320 aa22.82■■□□□ 1.24
SRSF4-206ENST00000605204 WDR46O15213 610 aaKnown RBP22.82■■□□□ 1.24
SRSF4-206ENST00000605204 EEF2P13639 858 aaKnown RBP22.82■■□□□ 1.24
SRSF4-206ENST00000605204 HABP4Q5JVS0 413 aaKnown RBP22.82■■□□□ 1.24
SRSF4-206ENST00000605204 VPS53Q5VIR6 699 aa22.82■■□□□ 1.24
SRSF4-206ENST00000605204 ZNF589Q86UQ0 364 aaPredicted RBP22.82■■□□□ 1.24
SRSF4-206ENST00000605204 SIAH1Q8IUQ4 282 aa22.82■■□□□ 1.24
SRSF4-206ENST00000605204 COA7Q96BR5 231 aa22.82■■□□□ 1.24
SRSF4-206ENST00000605204 RABGAP1Q9Y3P9 1069 aa22.82■■□□□ 1.24
SRSF4-206ENST00000605204 RAD50Q92878 1312 aa22.82■■□□□ 1.24
SRSF4-206ENST00000605204 CEP290O15078 2479 aa22.81■■□□□ 1.24
SRSF4-206ENST00000605204 NEFLP07196 543 aa22.81■■□□□ 1.24
SRSF4-206ENST00000605204 TSPY3P0CV98 308 aa22.81■■□□□ 1.24
SRSF4-206ENST00000605204 TSPY8P0CW00 308 aa22.81■■□□□ 1.24
SRSF4-206ENST00000605204 GSPT1P15170 499 aaKnown RBP22.81■■□□□ 1.24
SRSF4-206ENST00000605204 CWC27Q6UX04 472 aaKnown RBP22.81■■□□□ 1.24
SRSF4-206ENST00000605204 RAET1EQ8TD07 263 aa22.81■■□□□ 1.24
SRSF4-206ENST00000605204 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.81■■□□□ 1.24
SRSF4-206ENST00000605204 HOXC10Q9NYD6 342 aa22.81■■□□□ 1.24
SRSF4-206ENST00000605204 MYH8P13535 1937 aa22.81■■□□□ 1.24
SRSF4-206ENST00000605204 IGKV6D-41A0A0C4DH26 115 aa22.8■■□□□ 1.24
SRSF4-206ENST00000605204 FGAP02671 866 aa22.8■■□□□ 1.24
SRSF4-206ENST00000605204 CCNA1P78396 465 aa22.8■■□□□ 1.24
SRSF4-206ENST00000605204 NEDD1Q8NHV4 660 aa22.8■■□□□ 1.24
SRSF4-206ENST00000605204 TANGO6Q9C0B7 1094 aa22.8■■□□□ 1.24
SRSF4-206ENST00000605204 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.8■■□□□ 1.247e-16■■□□□ 12.1
SRSF4-206ENST00000605204 ORC4O43929 436 aa22.79■■□□□ 1.24
SRSF4-206ENST00000605204 MAPK4P31152 587 aa22.79■■□□□ 1.24
SRSF4-206ENST00000605204 ATP2B2Q01814 1243 aa22.79■■□□□ 1.24
SRSF4-206ENST00000605204 IRF5Q13568 498 aa22.79■■□□□ 1.24
SRSF4-206ENST00000605204 COG2Q14746 738 aa22.79■■□□□ 1.24
SRSF4-206ENST00000605204 CLEC10AQ8IUN9 316 aa22.79■■□□□ 1.24
SRSF4-206ENST00000605204 MB21D1Q8N884 522 aa22.79■■□□□ 1.24
SRSF4-206ENST00000605204 RUFY2Q8WXA3 655 aa22.79■■□□□ 1.24
SRSF4-206ENST00000605204 SHISA4Q96DD7 197 aa22.79■■□□□ 1.24
SRSF4-206ENST00000605204 PRDM1O75626 825 aa22.78■■□□□ 1.24
SRSF4-206ENST00000605204 TTLL1O95922 423 aa22.78■■□□□ 1.24
SRSF4-206ENST00000605204 FGRP09769 529 aa22.78■■□□□ 1.24
SRSF4-206ENST00000605204 ERVK-9P63128 1117 aa22.78■■□□□ 1.24
SRSF4-206ENST00000605204 ERVK-24P63145 666 aa22.78■■□□□ 1.24
SRSF4-206ENST00000605204 STK11IPQ8N1F8 1099 aa22.78■■□□□ 1.24
SRSF4-206ENST00000605204 SLAIN1Q8ND83 568 aa22.78■■□□□ 1.24
SRSF4-206ENST00000605204 DSCC1Q9BVC3 393 aa22.78■■□□□ 1.24
SRSF4-206ENST00000605204 TMEM106CQ9BVX2 250 aa22.78■■□□□ 1.24
SRSF4-206ENST00000605204 RBPJLQ9UBG7 517 aa22.78■■□□□ 1.24
SRSF4-206ENST00000605204 GREB1LQ9C091 1923 aaPredicted RBP22.78■■□□□ 1.24
SRSF4-206ENST00000605204 PRKCZQ05513 592 aa22.77■■□□□ 1.24
SRSF4-206ENST00000605204 CCAR1Q8IX12 1150 aaKnown RBP22.77■■□□□ 1.24
SRSF4-206ENST00000605204 SOCS4Q8WXH5 440 aa22.77■■□□□ 1.24
SRSF4-206ENST00000605204 MKL1Q969V6 931 aa22.77■■□□□ 1.24
SRSF4-206ENST00000605204 RNF41Q9H4P4 317 aaPredicted RBP22.77■■□□□ 1.24
SRSF4-206ENST00000605204 MTMR4Q9NYA4 1195 aa22.77■■□□□ 1.24
SRSF4-206ENST00000605204 RANBP2P49792 3224 aaKnown RBP22.77■■□□□ 1.24
SRSF4-206ENST00000605204 TSPY2A6NKD2 308 aa22.76■■□□□ 1.23
SRSF4-206ENST00000605204 SPDYE16A6NNV3 312 aaPredicted RBP22.76■■□□□ 1.23
SRSF4-206ENST00000605204 TFAP4Q01664 338 aa22.76■■□□□ 1.23
SRSF4-206ENST00000605204 PXYLP1Q8TE99 480 aa22.76■■□□□ 1.23
SRSF4-206ENST00000605204 CEP95Q96GE4 821 aa22.76■■□□□ 1.23
SRSF4-206ENST00000605204 PAGR1Q9BTK6 254 aa22.76■■□□□ 1.23
SRSF4-206ENST00000605204 TXNRD2Q9NNW7 524 aa22.76■■□□□ 1.23
SRSF4-206ENST00000605204 CTNNA3Q9UI47 895 aa22.76■■□□□ 1.23
SRSF4-206ENST00000605204 FLOT1O75955 427 aa22.76■■□□□ 1.23
SRSF4-206ENST00000605204 GRK4P32298 578 aa22.76■■□□□ 1.23
SRSF4-206ENST00000605204 FLT3LGP49771 235 aa22.76■■□□□ 1.23
SRSF4-206ENST00000605204 MTFR1Q15390 333 aa22.76■■□□□ 1.23
SRSF4-206ENST00000605204 SPICE1Q8N0Z3 855 aa22.76■■□□□ 1.23
SRSF4-206ENST00000605204 TRIOBPQ9H2D6 2365 aa22.75■■□□□ 1.23
SRSF4-206ENST00000605204 CTDSPL2Q05D32 466 aa22.75■■□□□ 1.23
SRSF4-206ENST00000605204 GMCL1P1Q8NEA9 526 aa22.75■■□□□ 1.23
SRSF4-206ENST00000605204 CLIP2Q9UDT6 1046 aa22.75■■□□□ 1.23
SRSF4-206ENST00000605204 SZT2Q5T011 3432 aa22.74■■□□□ 1.23
SRSF4-206ENST00000605204 F5H6K3 240 aa22.74■■□□□ 1.23
SRSF4-206ENST00000605204 ZNF213O14771 459 aa22.74■■□□□ 1.23
SRSF4-206ENST00000605204 CENPBP07199 599 aaPredicted RBP22.74■■□□□ 1.23
SRSF4-206ENST00000605204 DSG3P32926 999 aa22.74■■□□□ 1.23
SRSF4-206ENST00000605204 KLRC3Q07444 240 aa22.74■■□□□ 1.23
SRSF4-206ENST00000605204 STAG1Q8WVM7 1258 aa22.74■■□□□ 1.23
SRSF4-206ENST00000605204 FAM47AQ5JRC9 791 aa22.73■■□□□ 1.23
SRSF4-206ENST00000605204 KIAA1755Q5JYT7 1200 aa22.73■■□□□ 1.23
SRSF4-206ENST00000605204 AKNAD1Q5T1N1 836 aa22.73■■□□□ 1.23
SRSF4-206ENST00000605204 MFSD6Q6ZSS7 791 aa22.73■■□□□ 1.23
SRSF4-206ENST00000605204 CCDC136Q96JN2 1154 aa22.73■■□□□ 1.23
SRSF4-206ENST00000605204 CWC22Q9HCG8 908 aaKnown RBP22.73■■□□□ 1.23
SRSF4-206ENST00000605204 RANBP6O60518 1105 aaKnown RBP22.72■■□□□ 1.23
SRSF4-206ENST00000605204 NDUFB10O96000 172 aa22.72■■□□□ 1.23
SRSF4-206ENST00000605204 CHMLP26374 656 aa22.72■■□□□ 1.23
SRSF4-206ENST00000605204 FXR1P51114 621 aaKnown RBP eCLIP22.72■■□□□ 1.23
SRSF4-206ENST00000605204 UBXN2AP68543 259 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms