RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 PAGR1Q9BTK6 254 aa12.78□□□□□ -0.36
TUBE1-210ENST00000604967 UNC93B1Q9H1C4 597 aa12.78□□□□□ -0.36
TUBE1-210ENST00000604967 FBXO28Q9NVF7 368 aa12.78□□□□□ -0.36
TUBE1-210ENST00000604967 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.78□□□□□ -0.36
TUBE1-210ENST00000604967 PARP14Q460N5 1801 aa12.78□□□□□ -0.36
TUBE1-210ENST00000604967 MYH8P13535 1937 aa12.78□□□□□ -0.36
TUBE1-210ENST00000604967 ADCY3O60266 1144 aa12.77□□□□□ -0.37
TUBE1-210ENST00000604967 GSPT1P15170 499 aaKnown RBP12.77□□□□□ -0.37
TUBE1-210ENST00000604967 TDO2P48775 406 aa12.77□□□□□ -0.37
TUBE1-210ENST00000604967 CTDSPL2Q05D32 466 aa12.77□□□□□ -0.37
TUBE1-210ENST00000604967 IRF5Q13568 498 aa12.77□□□□□ -0.37
TUBE1-210ENST00000604967 ARHGEF6Q15052 776 aa12.77□□□□□ -0.37
TUBE1-210ENST00000604967 MORN1Q5T089 497 aa12.77□□□□□ -0.37
TUBE1-210ENST00000604967 SKAP1Q86WV1 359 aa12.77□□□□□ -0.37
TUBE1-210ENST00000604967 GPRC5AQ8NFJ5 357 aa12.77□□□□□ -0.37
TUBE1-210ENST00000604967 RAET1EQ8TD07 263 aa12.77□□□□□ -0.37
TUBE1-210ENST00000604967 CCDC17Q96LX7 622 aa12.77□□□□□ -0.37
TUBE1-210ENST00000604967 NUP88Q99567 741 aaPredicted RBP12.77□□□□□ -0.37
TUBE1-210ENST00000604967 VCPKMTQ9H867 229 aa12.77□□□□□ -0.37
TUBE1-210ENST00000604967 APPP05067 770 aa12.76□□□□□ -0.37
TUBE1-210ENST00000604967 INHAP05111 366 aa12.76□□□□□ -0.37
TUBE1-210ENST00000604967 CCL5P13501 91 aa12.76□□□□□ -0.37
TUBE1-210ENST00000604967 GNAT2P19087 354 aa12.76□□□□□ -0.37
TUBE1-210ENST00000604967 USP14P54578 494 aa12.76□□□□□ -0.37
TUBE1-210ENST00000604967 PPARAQ07869 468 aa12.76□□□□□ -0.37
TUBE1-210ENST00000604967 CCL14Q16627 93 aa12.76□□□□□ -0.37
TUBE1-210ENST00000604967 FAM47AQ5JRC9 791 aa12.76□□□□□ -0.37
TUBE1-210ENST00000604967 RASGRP2Q7LDG7 609 aa12.76□□□□□ -0.37
TUBE1-210ENST00000604967 ATG4CQ96DT6 458 aa12.76□□□□□ -0.37
TUBE1-210ENST00000604967 TAOK2Q9UL54 1235 aa12.76□□□□□ -0.37
TUBE1-210ENST00000604967 NMT2O60551 498 aa12.75□□□□□ -0.37
TUBE1-210ENST00000604967 IGHA2P01877 340 aa12.75□□□□□ -0.37
TUBE1-210ENST00000604967 SDSP20132 328 aa12.75□□□□□ -0.37
TUBE1-210ENST00000604967 HOXD10P28358 340 aa12.75□□□□□ -0.37
TUBE1-210ENST00000604967 GPR142Q7Z601 462 aa12.75□□□□□ -0.37
TUBE1-210ENST00000604967 UBE2Q1Q7Z7E8 422 aa12.75□□□□□ -0.37
TUBE1-210ENST00000604967 REPS2Q8NFH8 660 aa12.75□□□□□ -0.37
TUBE1-210ENST00000604967 TRIB2Q92519 343 aa12.75□□□□□ -0.37
TUBE1-210ENST00000604967 CEP95Q96GE4 821 aa12.75□□□□□ -0.37
TUBE1-210ENST00000604967 KANSL2Q9H9L4 492 aa12.75□□□□□ -0.37
TUBE1-210ENST00000604967 IL17RBQ9NRM6 502 aa12.75□□□□□ -0.37
TUBE1-210ENST00000604967 FLRT1Q9NZU1 646 aa12.75□□□□□ -0.37
TUBE1-210ENST00000604967 RABGAP1Q9Y3P9 1069 aa12.75□□□□□ -0.37
TUBE1-210ENST00000604967 PDE4DIPQ5VU43 2346 aa12.74□□□□□ -0.37
TUBE1-210ENST00000604967 TRIM6-TRIM34B2RNG4 842 aa12.74□□□□□ -0.37
TUBE1-210ENST00000604967 FGAP02671 866 aa12.74□□□□□ -0.37
TUBE1-210ENST00000604967 HSPD1P10809 573 aaKnown RBP12.74□□□□□ -0.37
TUBE1-210ENST00000604967 DSG3P32926 999 aa12.74□□□□□ -0.37
TUBE1-210ENST00000604967 ATP2B2Q01814 1243 aa12.74□□□□□ -0.37
TUBE1-210ENST00000604967 ALX1Q15699 326 aa12.74□□□□□ -0.37
TUBE1-210ENST00000604967 NBPF11Q86T75 865 aa12.74□□□□□ -0.37
TUBE1-210ENST00000604967 SLAIN1Q8ND83 568 aa12.74□□□□□ -0.37
TUBE1-210ENST00000604967 PXYLP1Q8TE99 480 aa12.74□□□□□ -0.37
TUBE1-210ENST00000604967 RILPL2Q969X0 211 aa12.74□□□□□ -0.37
TUBE1-210ENST00000604967 COA7Q96BR5 231 aa12.74□□□□□ -0.37
TUBE1-210ENST00000604967 DDRGK1Q96HY6 314 aa12.74□□□□□ -0.37
TUBE1-210ENST00000604967 MOV10L1Q9BXT6 1211 aaKnown RBP12.74□□□□□ -0.37
TUBE1-210ENST00000604967 NAPBQ9H115 298 aa12.74□□□□□ -0.37
TUBE1-210ENST00000604967 HELLSQ9NRZ9 838 aa12.74□□□□□ -0.37
TUBE1-210ENST00000604967 ADAMTS5Q9UNA0 930 aa12.74□□□□□ -0.37
TUBE1-210ENST00000604967 PLIN4Q96Q06 1357 aa12.73□□□□□ -0.37
TUBE1-210ENST00000604967 NDUFB10O96000 172 aa12.73□□□□□ -0.37
TUBE1-210ENST00000604967 FGRP09769 529 aa12.73□□□□□ -0.37
TUBE1-210ENST00000604967 CYP2B6P20813 491 aa12.73□□□□□ -0.37
TUBE1-210ENST00000604967 COG2Q14746 738 aa12.73□□□□□ -0.37
TUBE1-210ENST00000604967 TMEM132BQ14DG7 1078 aa12.73□□□□□ -0.37
TUBE1-210ENST00000604967 MCMDC2Q4G0Z9 681 aa12.73□□□□□ -0.37
TUBE1-210ENST00000604967 FAM83BQ5T0W9 1011 aa12.73□□□□□ -0.37
TUBE1-210ENST00000604967 MAP3K21Q5TCX8 1036 aa12.73□□□□□ -0.37
TUBE1-210ENST00000604967 LRRC47Q8N1G4 583 aaKnown RBP12.73□□□□□ -0.37
TUBE1-210ENST00000604967 NEDD1Q8NHV4 660 aa12.73□□□□□ -0.37
TUBE1-210ENST00000604967 TANGO6Q9C0B7 1094 aa12.73□□□□□ -0.37
TUBE1-210ENST00000604967 MKNK2Q9HBH9 465 aa12.73□□□□□ -0.37
TUBE1-210ENST00000604967 ARHGEF10LQ9HCE6 1279 aa12.73□□□□□ -0.37
TUBE1-210ENST00000604967 PAK6Q9NQU5 681 aaPredicted RBP12.73□□□□□ -0.37
TUBE1-210ENST00000604967 MTMR4Q9NYA4 1195 aa12.73□□□□□ -0.37
TUBE1-210ENST00000604967 NYAP2Q9P242 653 aa12.73□□□□□ -0.37
TUBE1-210ENST00000604967 ANAPC4Q9UJX5 808 aa12.73□□□□□ -0.37
TUBE1-210ENST00000604967 CCDC171Q6TFL3 1326 aa12.72□□□□□ -0.37
TUBE1-210ENST00000604967 F5H6K3 240 aa12.72□□□□□ -0.37
TUBE1-210ENST00000604967 WDR46O15213 610 aaKnown RBP12.72□□□□□ -0.37
TUBE1-210ENST00000604967 FLOT1O75955 427 aa12.72□□□□□ -0.37
TUBE1-210ENST00000604967 MNX1P50219 401 aaPredicted RBP12.72□□□□□ -0.37
TUBE1-210ENST00000604967 TFAP4Q01664 338 aa12.72□□□□□ -0.37
TUBE1-210ENST00000604967 KLRC3Q07444 240 aa12.72□□□□□ -0.37
TUBE1-210ENST00000604967 PLEKHH3Q7Z736 793 aa12.72□□□□□ -0.37
TUBE1-210ENST00000604967 TBC1D10CQ8IV04 446 aa12.72□□□□□ -0.37
TUBE1-210ENST00000604967 AMOTL1Q8IY63 956 aa12.72□□□□□ -0.37
TUBE1-210ENST00000604967 NPLOC4Q8TAT6 608 aa12.72□□□□□ -0.37
TUBE1-210ENST00000604967 LPAR1Q92633 364 aa12.72□□□□□ -0.37
TUBE1-210ENST00000604967 MKL1Q969V6 931 aa12.72□□□□□ -0.37
TUBE1-210ENST00000604967 RNF208Q9H0X6 261 aa12.72□□□□□ -0.37
TUBE1-210ENST00000604967 CLIP2Q9UDT6 1046 aa12.72□□□□□ -0.37
TUBE1-210ENST00000604967 ZBTB47Q9UFB7 747 aaPredicted RBP12.72□□□□□ -0.37
TUBE1-210ENST00000604967 COL11A1P12107 1806 aaPredicted RBP12.72□□□□□ -0.37
TUBE1-210ENST00000604967 COBLO75128 1261 aa12.71□□□□□ -0.37
TUBE1-210ENST00000604967 GJB1P08034 283 aa12.71□□□□□ -0.37
TUBE1-210ENST00000604967 PTPREP23469 700 aa12.71□□□□□ -0.37
TUBE1-210ENST00000604967 MAPK4P31152 587 aa12.71□□□□□ -0.37
TUBE1-210ENST00000604967 GJA8P48165 433 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms