RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 APOBRQ0VD83 1088 aa8.85□□□□□ -0.99
TUBE1-205ENST00000603651 CCDC120Q96HB5 630 aa8.85□□□□□ -0.99
TUBE1-205ENST00000603651 TMEM59LQ9UK28 342 aa8.85□□□□□ -0.99
TUBE1-205ENST00000603651 PCDHA11Q9Y5I1 949 aa8.85□□□□□ -0.99
TUBE1-205ENST00000603651 SLC22A31A6NKX4 558 aa8.84□□□□□ -0.99
TUBE1-205ENST00000603651 GREM1O60565 184 aa8.84□□□□□ -0.99
TUBE1-205ENST00000603651 GLI1P08151 1106 aa8.84□□□□□ -0.99
TUBE1-205ENST00000603651 POLR2BP30876 1174 aaKnown RBP8.84□□□□□ -0.99
TUBE1-205ENST00000603651 MFAP1P55081 439 aaKnown RBP8.84□□□□□ -0.99
TUBE1-205ENST00000603651 PKN1Q16512 942 aa8.84□□□□□ -0.99
TUBE1-205ENST00000603651 PRR23BQ6ZRT6 265 aa8.84□□□□□ -0.99
TUBE1-205ENST00000603651 TSPYL5Q86VY4 417 aaPredicted RBP8.84□□□□□ -0.99
TUBE1-205ENST00000603651 SLC38A3Q99624 504 aa8.84□□□□□ -0.99
TUBE1-205ENST00000603651 GPR62Q9BZJ7 368 aa8.84□□□□□ -0.99
TUBE1-205ENST00000603651 ROBO2Q9HCK4 1378 aa8.84□□□□□ -0.99
TUBE1-205ENST00000603651 SHISA3A0PJX4 238 aa8.83□□□□□ -1
TUBE1-205ENST00000603651 TRHRP34981 398 aaPredicted RBP8.83□□□□□ -1
TUBE1-205ENST00000603651 CLCQ05315 142 aa8.83□□□□□ -1
TUBE1-205ENST00000603651 GAB4Q2WGN9 574 aa8.83□□□□□ -1
TUBE1-205ENST00000603651 OVOS1Q6IE37 1185 aa8.83□□□□□ -1
TUBE1-205ENST00000603651 ABHD4Q8TB40 342 aa8.83□□□□□ -1
TUBE1-205ENST00000603651 DIRC2Q96SL1 478 aa8.83□□□□□ -1
TUBE1-205ENST00000603651 ASPNQ9BXN1 380 aa8.83□□□□□ -1
TUBE1-205ENST00000603651 FAM53CQ9NYF3 392 aa8.83□□□□□ -1
TUBE1-205ENST00000603651 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.82□□□□□ -1
TUBE1-205ENST00000603651 RGS13O14921 159 aa8.82□□□□□ -1
TUBE1-205ENST00000603651 MYLIPQ8WY64 445 aa8.82□□□□□ -1
TUBE1-205ENST00000603651 NKD1Q969G9 470 aa8.82□□□□□ -1
TUBE1-205ENST00000603651 SYTL4Q96C24 671 aaPredicted RBP8.82□□□□□ -1
TUBE1-205ENST00000603651 ZNF512BQ96KM6 892 aaPredicted RBP8.82□□□□□ -1
TUBE1-205ENST00000603651 LRRC3Q9BY71 257 aa8.82□□□□□ -1
TUBE1-205ENST00000603651 ASCC2Q9H1I8 757 aaPredicted RBP8.82□□□□□ -1
TUBE1-205ENST00000603651 GMIPQ9P107 970 aa8.82□□□□□ -1
TUBE1-205ENST00000603651 BTBD11A6QL63 1104 aa8.81□□□□□ -1
TUBE1-205ENST00000603651 UBOX5O94941 541 aa8.81□□□□□ -1
TUBE1-205ENST00000603651 SRFP11831 508 aa8.81□□□□□ -1
TUBE1-205ENST00000603651 NSUN3Q9H649 340 aaKnown RBP8.81□□□□□ -1
TUBE1-205ENST00000603651 ANTXR1Q9H6X2 564 aa8.81□□□□□ -1
TUBE1-205ENST00000603651 KCNK12Q9HB15 430 aa8.81□□□□□ -1
TUBE1-205ENST00000603651 KCNQ5Q9NR82 932 aa8.81□□□□□ -1
TUBE1-205ENST00000603651 FAM86C2PA6NEL3 165 aa8.8□□□□□ -1
TUBE1-205ENST00000603651 ZNF76P36508 570 aa8.8□□□□□ -1
TUBE1-205ENST00000603651 KIAA0825Q8IV33 1275 aa8.8□□□□□ -1
TUBE1-205ENST00000603651 FAM84AQ96KN4 292 aa8.8□□□□□ -1
TUBE1-205ENST00000603651 SPON2Q9BUD6 331 aa8.8□□□□□ -1
TUBE1-205ENST00000603651 BACH2Q9BYV9 841 aa8.8□□□□□ -1
TUBE1-205ENST00000603651 C19orf44Q9H6X5 657 aa8.8□□□□□ -1
TUBE1-205ENST00000603651 FZD5Q13467 585 aa8.79□□□□□ -1
TUBE1-205ENST00000603651 PCDHGB7Q9Y5F8 929 aa8.79□□□□□ -1
TUBE1-205ENST00000603651 ZNF165P49910 485 aa8.78□□□□□ -1
TUBE1-205ENST00000603651 RNF4P78317 190 aa8.78□□□□□ -1
TUBE1-205ENST00000603651 MESP2Q0VG99 397 aa8.78□□□□□ -1
TUBE1-205ENST00000603651 NMIQ13287 307 aaPredicted RBP8.78□□□□□ -1
TUBE1-205ENST00000603651 ATG4CQ96DT6 458 aa8.78□□□□□ -1
TUBE1-205ENST00000603651 EAF1Q96JC9 268 aaPredicted RBP8.78□□□□□ -1
TUBE1-205ENST00000603651 ATE1O95260 518 aa8.77□□□□□ -1.01
TUBE1-205ENST00000603651 SNW1Q13573 536 aaKnown RBP8.77□□□□□ -1.01
TUBE1-205ENST00000603651 ZNF394Q53GI3 561 aa8.77□□□□□ -1.01
TUBE1-205ENST00000603651 LDLRAD1Q5T700 205 aa8.77□□□□□ -1.01
TUBE1-205ENST00000603651 SYDE1Q6ZW31 735 aaPredicted RBP8.77□□□□□ -1.01
TUBE1-205ENST00000603651 NLRC3Q7RTR2 1065 aa8.77□□□□□ -1.01
TUBE1-205ENST00000603651 TMC3Q7Z5M5 1100 aa8.77□□□□□ -1.01
TUBE1-205ENST00000603651 USP48Q86UV5 1035 aa8.77□□□□□ -1.01
TUBE1-205ENST00000603651 SSU72P8A0A1W2PR75 194 aa8.76□□□□□ -1.01
TUBE1-205ENST00000603651 CLEC3AO75596 197 aa8.76□□□□□ -1.01
TUBE1-205ENST00000603651 HPXP02790 462 aa8.76□□□□□ -1.01
TUBE1-205ENST00000603651 ZGLP1P0C6A0 271 aa8.76□□□□□ -1.01
TUBE1-205ENST00000603651 RPL10P27635 214 aaKnown RBP8.76□□□□□ -1.01
TUBE1-205ENST00000603651 NT5C1AQ9BXI3 368 aa8.76□□□□□ -1.01
TUBE1-205ENST00000603651 RNF32Q9H0A6 362 aa8.76□□□□□ -1.01
TUBE1-205ENST00000603651 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.76□□□□□ -1.01
TUBE1-205ENST00000603651 EHMT1Q9H9B1 1298 aa8.76□□□□□ -1.01
TUBE1-205ENST00000603651 RBM47A0AV96 593 aaKnown RBP8.75□□□□□ -1.01
TUBE1-205ENST00000603651 MEIS1O00470 390 aa8.75□□□□□ -1.01
TUBE1-205ENST00000603651 FKTNO75072 461 aa8.75□□□□□ -1.01
TUBE1-205ENST00000603651 JAG1P78504 1218 aa8.75□□□□□ -1.01
TUBE1-205ENST00000603651 NBPF12Q5TAG4 269 aaPredicted RBP8.75□□□□□ -1.01
TUBE1-205ENST00000603651 FBXW10Q5XX13 1052 aa8.75□□□□□ -1.01
TUBE1-205ENST00000603651 HOMEZQ8IX15 550 aa8.75□□□□□ -1.01
TUBE1-205ENST00000603651 DHX38Q92620 1227 aaKnown RBP8.75□□□□□ -1.01
TUBE1-205ENST00000603651 KRTAP9-9Q9BYP9 154 aa8.75□□□□□ -1.01
TUBE1-205ENST00000603651 KRTAP9-4Q9BYQ2 154 aa8.75□□□□□ -1.01
TUBE1-205ENST00000603651 FOXP3Q9BZS1 431 aa8.75□□□□□ -1.01
TUBE1-205ENST00000603651 CNNM2Q9H8M5 875 aa8.75□□□□□ -1.01
TUBE1-205ENST00000603651 DCP1AQ9NPI6 582 aaPredicted RBP8.75□□□□□ -1.01
TUBE1-205ENST00000603651 ZMYM5Q9UJ78 669 aa8.75□□□□□ -1.01
TUBE1-205ENST00000603651 GALK1P51570 392 aa8.74□□□□□ -1.01
TUBE1-205ENST00000603651 TEKQ02763 1124 aa8.74□□□□□ -1.01
TUBE1-205ENST00000603651 NBPF9Q3BBW0 867 aa8.74□□□□□ -1.01
TUBE1-205ENST00000603651 CDCP2Q5VXM1 449 aa8.74□□□□□ -1.01
TUBE1-205ENST00000603651 OXR1Q8N573 874 aa8.74□□□□□ -1.01
TUBE1-205ENST00000603651 PDZD8Q8NEN9 1154 aa8.74□□□□□ -1.01
TUBE1-205ENST00000603651 VWCEQ96DN2 955 aa8.74□□□□□ -1.01
TUBE1-205ENST00000603651 MKRN2Q9H000 416 aaKnown RBP8.74□□□□□ -1.01
TUBE1-205ENST00000603651 MINPP1Q9UNW1 487 aa8.74□□□□□ -1.01
TUBE1-205ENST00000603651 FANCCQ00597 558 aa8.73□□□□□ -1.01
TUBE1-205ENST00000603651 TIGD5Q53EQ6 642 aa8.73□□□□□ -1.01
TUBE1-205ENST00000603651 WAPLQ7Z5K2 1190 aa8.73□□□□□ -1.01
TUBE1-205ENST00000603651 SLITRK4Q8IW52 837 aa8.73□□□□□ -1.01
TUBE1-205ENST00000603651 REXO1Q8N1G1 1221 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms