RNA–Protein interactions for RNA: ENST00000603334.1

DDX55P1-201, Transcript of DEAD-box helicase 55 pseudogene 1, humanhuman

BASIC

Gene DDX55P1, Length 1,414 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55P1-201ENST00000603334 TMTC2Q8N394 836 aa12.04□□□□□ -0.48
DDX55P1-201ENST00000603334 FOXD4L4Q8WXT5 416 aaPredicted RBP12.04□□□□□ -0.48
DDX55P1-201ENST00000603334 WNK4Q96J92 1243 aa12.04□□□□□ -0.48
DDX55P1-201ENST00000603334 TRIM34Q9BYJ4 488 aa12.04□□□□□ -0.48
DDX55P1-201ENST00000603334 AGXT2Q9BYV1 514 aa12.04□□□□□ -0.48
DDX55P1-201ENST00000603334 R3HDMLQ9H3Y0 253 aa12.04□□□□□ -0.48
DDX55P1-201ENST00000603334 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.04□□□□□ -0.48
DDX55P1-201ENST00000603334 GOLGA8BA8MQT2 603 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 ORC4O43929 436 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 PLCD1P51178 756 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 SCRN1Q12765 414 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 NBR1Q14596 966 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 FAM184AQ8NB25 1140 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 NKX2-3Q8TAU0 364 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 IGDCC4Q8TDY8 1250 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 GTF3C6Q969F1 213 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 SERPINB13Q9UIV8 391 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 BRPF3Q9ULD4 1205 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 SLC12A7Q9Y666 1083 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 SNCAIPQ9Y6H5 919 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 PHIPQ8WWQ0 1821 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 TESPA1A2RU30 521 aaPredicted RBP12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 IGF2BP3O00425 579 aaKnown RBP eCLIP12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 CPLX1O14810 134 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 DHX16O60231 1041 aaKnown RBP12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 ALDH1A1P00352 501 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 DDIT3P35638 169 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 CDK8P49336 464 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 GTF2A2P52657 109 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 TFAP4Q01664 338 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 PPIL2Q13356 520 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 FBXL16Q8N461 479 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 CRACR2BQ8N4Y2 399 aaPredicted RBP12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 OPTNQ96CV9 577 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 DDX11Q96FC9 970 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 ZSCAN10Q96SZ4 725 aaPredicted RBP12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 CFHR5Q9BXR6 569 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 LY9Q9HBG7 655 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 PICK1Q9NRD5 415 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 SWAP70Q9UH65 585 aa12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.03□□□□□ -0.48
DDX55P1-201ENST00000603334 MYH6P13533 1939 aa12.02□□□□□ -0.48
DDX55P1-201ENST00000603334 PTPRFP10586 1907 aa12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 TCHHQ07283 1943 aa12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 CXCL11O14625 94 aa12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 ZBTB43O43298 467 aa12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 FGRP09769 529 aa12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 TSPY3P0CV98 308 aa12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 TSPY8P0CW00 308 aa12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 CAP2P40123 477 aa12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 LIFRP42702 1097 aa12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 METAP2P50579 478 aaKnown RBP eCLIP12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 ST3GAL1Q11201 340 aa12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 RAB3GAP1Q15042 981 aa12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 CCDC178Q5BJE1 867 aa12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 IFIT1BQ5T764 474 aaKnown RBP12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 LARP1BQ659C4 914 aaKnown RBP12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 OTUD7BQ6GQQ9 843 aa12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 TATDN1Q6P1N9 297 aa12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 CPLX2Q6PUV4 134 aaKnown RBP12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 CCDC144CPQ8IYA2 1237 aa12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 NUP133Q8WUM0 1156 aa12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 ZKSCAN4Q969J2 545 aaPredicted RBP12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 ABHD8Q96I13 439 aa12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 MS4A4AQ96JQ5 239 aa12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 PTPN18Q99952 460 aa12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 MTA3Q9BTC8 594 aa12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 ELP3Q9H9T3 547 aa12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 SENP2Q9HC62 589 aa12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 NCOA5Q9HCD5 579 aaKnown RBP12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 ZCCHC17Q9NP64 241 aaKnown RBP12.02□□□□□ -0.49
DDX55P1-201ENST00000603334 TNRC18O15417 2968 aaPredicted RBP12.01□□□□□ -0.49
DDX55P1-201ENST00000603334 TNKSO95271 1327 aa12.01□□□□□ -0.49
DDX55P1-201ENST00000603334 SPDYE4A6NLX3 237 aa12.01□□□□□ -0.49
DDX55P1-201ENST00000603334 GOLGA8AA7E2F4 631 aa12.01□□□□□ -0.49
DDX55P1-201ENST00000603334 TBC1D8O95759 1140 aa12.01□□□□□ -0.49
DDX55P1-201ENST00000603334 ASNSP08243 561 aa12.01□□□□□ -0.49
DDX55P1-201ENST00000603334 CETPP11597 493 aa12.01□□□□□ -0.49
DDX55P1-201ENST00000603334 RXRAP19793 462 aa12.01□□□□□ -0.49
DDX55P1-201ENST00000603334 INPP5BP32019 993 aa12.01□□□□□ -0.49
DDX55P1-201ENST00000603334 GABPAQ06546 454 aa12.01□□□□□ -0.49
DDX55P1-201ENST00000603334 SNAPC2Q13487 334 aa12.01□□□□□ -0.49
DDX55P1-201ENST00000603334 NFKBIBQ15653 356 aa12.01□□□□□ -0.49
DDX55P1-201ENST00000603334 MICU3Q86XE3 530 aa12.01□□□□□ -0.49
DDX55P1-201ENST00000603334 IFNL1Q8IU54 200 aa12.01□□□□□ -0.49
DDX55P1-201ENST00000603334 SLC44A5Q8NCS7 719 aa12.01□□□□□ -0.49
DDX55P1-201ENST00000603334 TNPO1Q92973 898 aaKnown RBP12.01□□□□□ -0.49
DDX55P1-201ENST00000603334 LLPHQ9BRT6 129 aaKnown RBP12.01□□□□□ -0.49
DDX55P1-201ENST00000603334 MYL10Q9BUA6 226 aa12.01□□□□□ -0.49
DDX55P1-201ENST00000603334 MCOLN1Q9GZU1 580 aa12.01□□□□□ -0.49
DDX55P1-201ENST00000603334 KCNH4Q9UQ05 1017 aa12.01□□□□□ -0.49
DDX55P1-201ENST00000603334 KIF3AQ9Y496 699 aa12.01□□□□□ -0.49
DDX55P1-201ENST00000603334 MKI67P46013 3256 aaKnown RBP12.01□□□□□ -0.49
DDX55P1-201ENST00000603334 DOCK1Q14185 1865 aa12□□□□□ -0.49
DDX55P1-201ENST00000603334 ZSWIM8A7E2V4 1837 aa12□□□□□ -0.49
DDX55P1-201ENST00000603334 ATAD5Q96QE3 1844 aa12□□□□□ -0.49
DDX55P1-201ENST00000603334 VPS37CA5D8V6 355 aaPredicted RBP12□□□□□ -0.49
DDX55P1-201ENST00000603334 JAK2O60674 1132 aa12□□□□□ -0.49
DDX55P1-201ENST00000603334 SLURP2P0DP57 97 aa12□□□□□ -0.49
DDX55P1-201ENST00000603334 PTPRAP18433 802 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms