RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685	SLF1	Q9BQI6	1058 aa		18.76	■□□□□ 0.59
CAPN12-211	ENST00000601685	CTNND2	Q9UQB3	1225 aa		18.76	■□□□□ 0.59
CAPN12-211	ENST00000601685	EIF3CL	B5ME19	914 aa	Known RBP	18.75	■□□□□ 0.59
CAPN12-211	ENST00000601685	ITGA6	P23229	1130 aa		18.75	■□□□□ 0.59
CAPN12-211	ENST00000601685	ARID4A	P29374	1257 aa	Predicted RBP	18.75	■□□□□ 0.59
CAPN12-211	ENST00000601685	VGLL2	Q8N8G2	317 aa		18.75	■□□□□ 0.59
CAPN12-211	ENST00000601685	CTCFL	Q8NI51	663 aa	Predicted RBP	18.75	■□□□□ 0.59
CAPN12-211	ENST00000601685	EIF3C	Q99613	913 aa	Known RBP	18.75	■□□□□ 0.59
CAPN12-211	ENST00000601685	STRCP1	A6NGW2	1772 aa		18.75	■□□□□ 0.59
CAPN12-211	ENST00000601685	GPT	P24298	496 aa		18.75	■□□□□ 0.59
CAPN12-211	ENST00000601685	CDC25A	P30304	524 aa		18.75	■□□□□ 0.59
CAPN12-211	ENST00000601685	PHKA1	P46020	1223 aa		18.75	■□□□□ 0.59
CAPN12-211	ENST00000601685	USP14	P54578	494 aa		18.75	■□□□□ 0.59
CAPN12-211	ENST00000601685	SART3	Q15020	963 aa	Known RBP	18.75	■□□□□ 0.59
CAPN12-211	ENST00000601685	TRAPPC11	Q7Z392	1133 aa		18.75	■□□□□ 0.59
CAPN12-211	ENST00000601685	NUP88	Q99567	741 aa	Predicted RBP	18.75	■□□□□ 0.59
CAPN12-211	ENST00000601685	ZKSCAN3	Q9BRR0	538 aa		18.75	■□□□□ 0.59
CAPN12-211	ENST00000601685	GREM2	Q9H772	168 aa		18.75	■□□□□ 0.59
CAPN12-211	ENST00000601685	FAM205C	A6NFA0	338 aa		18.74	■□□□□ 0.59
CAPN12-211	ENST00000601685	SYF2	O95926	243 aa	Known RBP	18.74	■□□□□ 0.59
CAPN12-211	ENST00000601685	COPB1	P53618	953 aa	Known RBP	18.74	■□□□□ 0.59
CAPN12-211	ENST00000601685	RCAN1	P53805	252 aa		18.74	■□□□□ 0.59
CAPN12-211	ENST00000601685	DNAJC10	Q8IXB1	793 aa		18.74	■□□□□ 0.59
CAPN12-211	ENST00000601685	TMOD3	Q9NYL9	352 aa		18.74	■□□□□ 0.59
CAPN12-211	ENST00000601685	RNF40	O75150	1001 aa		18.74	■□□□□ 0.59
CAPN12-211	ENST00000601685	CORO7	P57737	925 aa		18.74	■□□□□ 0.59
CAPN12-211	ENST00000601685	SPAG1	Q07617	926 aa		18.74	■□□□□ 0.59
CAPN12-211	ENST00000601685	RRP12	Q5JTH9	1297 aa	Known RBP	18.74	■□□□□ 0.59
CAPN12-211	ENST00000601685	TMTC2	Q8N394	836 aa		18.74	■□□□□ 0.59
CAPN12-211	ENST00000601685	FANCB	Q8NB91	859 aa		18.74	■□□□□ 0.59
CAPN12-211	ENST00000601685	STAG1	Q8WVM7	1258 aa		18.74	■□□□□ 0.59
CAPN12-211	ENST00000601685	FERMT2	Q96AC1	680 aa		18.74	■□□□□ 0.59
CAPN12-211	ENST00000601685	VPS16	Q9H269	839 aa		18.74	■□□□□ 0.59
CAPN12-211	ENST00000601685	CNNM1	Q9NRU3	951 aa		18.74	■□□□□ 0.59
CAPN12-211	ENST00000601685	MYH8	P13535	1937 aa		18.74	■□□□□ 0.59
CAPN12-211	ENST00000601685	CHD4	Q14839	1912 aa		18.74	■□□□□ 0.59
CAPN12-211	ENST00000601685	COL5A2	P05997	1499 aa	Predicted RBP	18.73	■□□□□ 0.59
CAPN12-211	ENST00000601685	PRPF6	O94906	941 aa	Known RBP	18.73	■□□□□ 0.59
CAPN12-211	ENST00000601685	MBD4	O95243	580 aa		18.73	■□□□□ 0.59
CAPN12-211	ENST00000601685	UQCRFS1P1	P0C7P4	283 aa		18.73	■□□□□ 0.59
CAPN12-211	ENST00000601685	AFAP1L1	Q8TED9	768 aa		18.73	■□□□□ 0.59
CAPN12-211	ENST00000601685	SHISA4	Q96DD7	197 aa		18.73	■□□□□ 0.59
CAPN12-211	ENST00000601685	MTA3	Q9BTC8	594 aa		18.73	■□□□□ 0.59
CAPN12-211	ENST00000601685	ASAP1	Q9ULH1	1129 aa		18.73	■□□□□ 0.59
CAPN12-211	ENST00000601685	REXO2	Q9Y3B8	237 aa	Known RBP	18.73	■□□□□ 0.59
CAPN12-211	ENST00000601685	KDM4F	A0A1W2PPD8	638 aa		18.73	■□□□□ 0.59
CAPN12-211	ENST00000601685	MCM3	P25205	808 aa		18.73	■□□□□ 0.59
CAPN12-211	ENST00000601685	KRT9	P35527	623 aa		18.73	■□□□□ 0.59
CAPN12-211	ENST00000601685	RWDD2A	Q9UIY3	292 aa		18.73	■□□□□ 0.59
CAPN12-211	ENST00000601685	EPN1	Q9Y6I3	576 aa	Predicted RBP	18.73	■□□□□ 0.59
CAPN12-211	ENST00000601685	ERICH2	A1L162	156 aa		18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	GSG1L2	A8MUP6	293 aa		18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	PSMD14	O00487	310 aa		18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	COBL	O75128	1261 aa		18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	PDE8B	O95263	885 aa		18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	HLF	Q16534	295 aa		18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	MAP9	Q49MG5	647 aa		18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	ZNF654	Q8IZM8	581 aa		18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	NUP133	Q8WUM0	1156 aa		18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	RNF26	Q9BY78	433 aa	Predicted RBP	18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	ARMT1	Q9H993	441 aa		18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	TAB2	Q9NYJ8	693 aa		18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	PPFIA4	O75335	1185 aa		18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	NDUFA10	O95299	355 aa		18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	BMP15	O95972	392 aa		18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	AKAP17A	Q02040	695 aa	Known RBP	18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	TTC31	Q49AM3	519 aa	Predicted RBP	18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	EARS2	Q5JPH6	523 aa	Known RBP	18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	CHP1	Q99653	195 aa		18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	TOMM22	Q9NS69	142 aa		18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	HPCAL4	Q9UM19	191 aa		18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	GUCA1B	Q9UMX6	200 aa		18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	CDHR2	Q9BYE9	1310 aa		18.72	■□□□□ 0.59
CAPN12-211	ENST00000601685	ANKRD18B	A2A2Z9	1011 aa		18.71	■□□□□ 0.59
CAPN12-211	ENST00000601685	TCP11X2	Q5H9J9	407 aa		18.71	■□□□□ 0.59
CAPN12-211	ENST00000601685	RRAGB	Q5VZM2	374 aa		18.71	■□□□□ 0.59
CAPN12-211	ENST00000601685	GIGYF2	Q6Y7W6	1299 aa	Known RBP	18.71	■□□□□ 0.59
CAPN12-211	ENST00000601685	MAGEB6	Q8N7X4	407 aa		18.71	■□□□□ 0.59
CAPN12-211	ENST00000601685	CARD10	Q9BWT7	1032 aa		18.71	■□□□□ 0.59
CAPN12-211	ENST00000601685	TRIM10	Q9UDY6	481 aa		18.71	■□□□□ 0.59
CAPN12-211	ENST00000601685	XDH	P47989	1333 aa		18.71	■□□□□ 0.59
CAPN12-211	ENST00000601685	KRT2	P35908	639 aa		18.71	■□□□□ 0.59
CAPN12-211	ENST00000601685	BRINP3	Q76B58	766 aa		18.71	■□□□□ 0.59
CAPN12-211	ENST00000601685	PACS2	Q86VP3	889 aa		18.71	■□□□□ 0.59
CAPN12-211	ENST00000601685	ANKRD20A12P	Q8NF67	263 aa		18.71	■□□□□ 0.59
CAPN12-211	ENST00000601685	HAUS4	Q9H6D7	363 aa		18.71	■□□□□ 0.59
CAPN12-211	ENST00000601685	KCNJ18	B7U540	433 aa		18.7	■□□□□ 0.58
CAPN12-211	ENST00000601685	XBP1	P17861	261 aa		18.7	■□□□□ 0.58
CAPN12-211	ENST00000601685	KCNJ12	Q14500	433 aa		18.7	■□□□□ 0.58
CAPN12-211	ENST00000601685	STAM	Q92783	540 aa		18.7	■□□□□ 0.58
CAPN12-211	ENST00000601685	PHF20	Q9BVI0	1012 aa		18.7	■□□□□ 0.58
CAPN12-211	ENST00000601685	VPS54	Q9P1Q0	977 aa		18.7	■□□□□ 0.58
CAPN12-211	ENST00000601685	ZC3H4	Q9UPT8	1303 aa	Known RBP	18.7	■□□□□ 0.58
CAPN12-211	ENST00000601685	TARSL2	A2RTX5	802 aa	Known RBP	18.7	■□□□□ 0.58
CAPN12-211	ENST00000601685	CTSW	P56202	376 aa		18.7	■□□□□ 0.58
CAPN12-211	ENST00000601685	PAK1	Q13153	545 aa		18.7	■□□□□ 0.58
CAPN12-211	ENST00000601685	NLRP10	Q86W26	655 aa		18.7	■□□□□ 0.58
CAPN12-211	ENST00000601685	PPM1E	Q8WY54	764 aa		18.7	■□□□□ 0.58
CAPN12-211	ENST00000601685	MMS19	Q96T76	1030 aa		18.7	■□□□□ 0.58
CAPN12-211	ENST00000601685	SHANK3	Q9BYB0	1731 aa		18.69	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 690.9 ms