RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 CNTNAP1P78357 1384 aa15.89■□□□□ 0.13
IRF3-229ENST00000601373 TBC1D12O60347 775 aa15.89■□□□□ 0.13
IRF3-229ENST00000601373 TTLL1O95922 423 aa15.89■□□□□ 0.13
IRF3-229ENST00000601373 XBP1P17861 261 aa15.89■□□□□ 0.13
IRF3-229ENST00000601373 HOXD11P31277 338 aaPredicted RBP15.89■□□□□ 0.13
IRF3-229ENST00000601373 NBPF9Q3BBW0 867 aa15.89■□□□□ 0.13
IRF3-229ENST00000601373 DNAJC18Q9H819 358 aa15.89■□□□□ 0.13
IRF3-229ENST00000601373 ZNF541Q9H0D2 1346 aa15.89■□□□□ 0.13
IRF3-229ENST00000601373 MPHOSPH10O00566 681 aaKnown RBP15.88■□□□□ 0.13
IRF3-229ENST00000601373 PPFIA3O75145 1194 aa15.88■□□□□ 0.13
IRF3-229ENST00000601373 SMARCA1P28370 1054 aa15.88■□□□□ 0.13
IRF3-229ENST00000601373 CTCFP49711 727 aaPredicted RBP15.88■□□□□ 0.13
IRF3-229ENST00000601373 KRT85P78386 507 aa15.88■□□□□ 0.13
IRF3-229ENST00000601373 RESTQ13127 1097 aa15.88■□□□□ 0.13
IRF3-229ENST00000601373 RBM26Q5T8P6 1007 aaKnown RBP15.88■□□□□ 0.13
IRF3-229ENST00000601373 ATL3Q6DD88 541 aa15.88■□□□□ 0.13
IRF3-229ENST00000601373 TMEM179Q6ZVK1 233 aa15.88■□□□□ 0.13
IRF3-229ENST00000601373 FERMT3Q86UX7 667 aa15.88■□□□□ 0.13
IRF3-229ENST00000601373 LDHDQ86WU2 507 aa15.88■□□□□ 0.13
IRF3-229ENST00000601373 KANSL2Q9H9L4 492 aa15.88■□□□□ 0.13
IRF3-229ENST00000601373 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.88■□□□□ 0.13
IRF3-229ENST00000601373 CABP5Q9NP86 173 aa15.88■□□□□ 0.13
IRF3-229ENST00000601373 RNF216Q9NWF9 866 aaPredicted RBP15.88■□□□□ 0.13
IRF3-229ENST00000601373 SIPA1L1O43166 1804 aa15.87■□□□□ 0.13
IRF3-229ENST00000601373 PALM3A6NDB9 673 aaPredicted RBP15.87■□□□□ 0.13
IRF3-229ENST00000601373 TRAK2O60296 914 aa15.87■□□□□ 0.13
IRF3-229ENST00000601373 PARP1P09874 1014 aaKnown RBP15.87■□□□□ 0.13
IRF3-229ENST00000601373 FUT2Q10981 343 aa15.87■□□□□ 0.13
IRF3-229ENST00000601373 ABCB5Q2M3G0 1257 aa15.87■□□□□ 0.13
IRF3-229ENST00000601373 KIF4BQ2VIQ3 1234 aa15.87■□□□□ 0.13
IRF3-229ENST00000601373 TMEM87AQ8NBN3 555 aa15.87■□□□□ 0.13
IRF3-229ENST00000601373 MKL1Q969V6 931 aa15.87■□□□□ 0.13
IRF3-229ENST00000601373 L3MBTL3Q96JM7 780 aaPredicted RBP15.87■□□□□ 0.13
IRF3-229ENST00000601373 LMBRD1Q9NUN5 540 aa15.87■□□□□ 0.13
IRF3-229ENST00000601373 GPRC5DQ9NZD1 345 aa15.87■□□□□ 0.13
IRF3-229ENST00000601373 NYAP2Q9P242 653 aa15.87■□□□□ 0.13
IRF3-229ENST00000601373 PASKQ96RG2 1323 aa15.87■□□□□ 0.13
IRF3-229ENST00000601373 SHTN1A0MZ66 631 aa15.86■□□□□ 0.13
IRF3-229ENST00000601373 FOXN1O15353 648 aa15.86■□□□□ 0.13
IRF3-229ENST00000601373 PRPF40AO75400 957 aaKnown RBP15.86■□□□□ 0.13
IRF3-229ENST00000601373 PLEKHA8P1O95397 391 aa15.86■□□□□ 0.13
IRF3-229ENST00000601373 FOSBP53539 338 aa15.86■□□□□ 0.13
IRF3-229ENST00000601373 GUCY1B3Q02153 619 aa15.86■□□□□ 0.13
IRF3-229ENST00000601373 MAP3K10Q02779 954 aa15.86■□□□□ 0.13
IRF3-229ENST00000601373 SAFBQ15424 915 aaKnown RBP eCLIP15.86■□□□□ 0.13
IRF3-229ENST00000601373 KRT40Q6A162 431 aa15.86■□□□□ 0.13
IRF3-229ENST00000601373 BRAPQ7Z569 592 aa15.86■□□□□ 0.13
IRF3-229ENST00000601373 CCDC82Q8N4S0 544 aa15.86■□□□□ 0.13
IRF3-229ENST00000601373 SRBD1Q8N5C6 995 aaKnown RBP15.86■□□□□ 0.13
IRF3-229ENST00000601373 ZNF396Q96N95 335 aaPredicted RBP15.86■□□□□ 0.13
IRF3-229ENST00000601373 SCAND2PQ9GZW5 306 aaPredicted RBP15.86■□□□□ 0.13
IRF3-229ENST00000601373 CLIP2Q9UDT6 1046 aa15.86■□□□□ 0.13
IRF3-229ENST00000601373 MAD2L2Q9UI95 211 aa15.86■□□□□ 0.13
IRF3-229ENST00000601373 CFAP45Q9UL16 551 aa15.86■□□□□ 0.13
IRF3-229ENST00000601373 V9GY48 417 aaPredicted RBP15.86■□□□□ 0.13
IRF3-229ENST00000601373 TMEM88BA6NKF7 163 aa15.85■□□□□ 0.13
IRF3-229ENST00000601373 DDNO94850 711 aaPredicted RBP15.85■□□□□ 0.13
IRF3-229ENST00000601373 NCLP19338 710 aaKnown RBP15.85■□□□□ 0.13
IRF3-229ENST00000601373 DNM1Q05193 864 aaKnown RBP15.85■□□□□ 0.13
IRF3-229ENST00000601373 RASA3Q14644 834 aa15.85■□□□□ 0.13
IRF3-229ENST00000601373 FOXD4L6Q3SYB3 417 aaPredicted RBP15.85■□□□□ 0.13
IRF3-229ENST00000601373 TBC1D10BQ4KMP7 808 aaPredicted RBP15.85■□□□□ 0.13
IRF3-229ENST00000601373 ASPRV1Q53RT3 343 aa15.85■□□□□ 0.13
IRF3-229ENST00000601373 FOXD4L3Q6VB84 417 aaPredicted RBP15.85■□□□□ 0.13
IRF3-229ENST00000601373 SAMD7Q7Z3H4 446 aa15.85■□□□□ 0.13
IRF3-229ENST00000601373 APOBEC3FQ8IUX4 373 aaKnown RBP15.85■□□□□ 0.13
IRF3-229ENST00000601373 CMTR1Q8N1G2 835 aaKnown RBP15.85■□□□□ 0.13
IRF3-229ENST00000601373 PGAP2Q9UHJ9 254 aa15.85■□□□□ 0.13
IRF3-229ENST00000601373 SYNPO2Q9UMS6 1093 aa15.85■□□□□ 0.13
IRF3-229ENST00000601373 GREB1LQ9C091 1923 aaPredicted RBP15.85■□□□□ 0.13
IRF3-229ENST00000601373 CNTNAP5Q8WYK1 1306 aa15.85■□□□□ 0.13
IRF3-229ENST00000601373 FAM196BA6NMK8 535 aa15.84■□□□□ 0.13
IRF3-229ENST00000601373 OTUD7BQ6GQQ9 843 aa15.84■□□□□ 0.13
IRF3-229ENST00000601373 FAM177A1Q8N128 213 aaPredicted RBP15.84■□□□□ 0.13
IRF3-229ENST00000601373 HOOK2Q96ED9 719 aa15.84■□□□□ 0.13
IRF3-229ENST00000601373 AIFM3Q96NN9 605 aa15.84■□□□□ 0.13
IRF3-229ENST00000601373 SPZ1Q9BXG8 430 aa15.84■□□□□ 0.13
IRF3-229ENST00000601373 TMEM39BQ9GZU3 492 aa15.84■□□□□ 0.13
IRF3-229ENST00000601373 HACL1Q9UJ83 578 aa15.84■□□□□ 0.13
IRF3-229ENST00000601373 CNPY2Q9Y2B0 182 aa15.84■□□□□ 0.13
IRF3-229ENST00000601373 KLRF2D3W0D1 207 aa15.83■□□□□ 0.12
IRF3-229ENST00000601373 MBD3O95983 291 aa15.83■□□□□ 0.12
IRF3-229ENST00000601373 SNHG28P0DPA3 235 aa15.83■□□□□ 0.12
IRF3-229ENST00000601373 PDHBP11177 359 aa15.83■□□□□ 0.12
IRF3-229ENST00000601373 LMOD1P29536 600 aaPredicted RBP15.83■□□□□ 0.12
IRF3-229ENST00000601373 GUCY1A2P33402 732 aa15.83■□□□□ 0.12
IRF3-229ENST00000601373 KIF23Q02241 960 aaPredicted RBP15.83■□□□□ 0.12
IRF3-229ENST00000601373 PKN1Q16512 942 aa15.83■□□□□ 0.12
IRF3-229ENST00000601373 PFKFB3Q16875 520 aaPredicted RBP15.83■□□□□ 0.12
IRF3-229ENST00000601373 USP48Q86UV5 1035 aa15.83■□□□□ 0.12
IRF3-229ENST00000601373 STAG2Q8N3U4 1231 aa15.83■□□□□ 0.12
IRF3-229ENST00000601373 TAF1DQ9H5J8 278 aaPredicted RBP15.83■□□□□ 0.12
IRF3-229ENST00000601373 GINM1Q9NU53 330 aa15.83■□□□□ 0.12
IRF3-229ENST00000601373 WBP1LQ9NX94 342 aa15.83■□□□□ 0.12
IRF3-229ENST00000601373 MYH6P13533 1939 aa15.82■□□□□ 0.12
IRF3-229ENST00000601373 TCHHQ07283 1943 aa15.82■□□□□ 0.12
IRF3-229ENST00000601373 EGFRP00533 1210 aa15.82■□□□□ 0.12
IRF3-229ENST00000601373 GH2P01242 217 aa15.82■□□□□ 0.12
IRF3-229ENST00000601373 MMP1P03956 469 aa15.82■□□□□ 0.12
IRF3-229ENST00000601373 SCG2P13521 617 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms