RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 KRT79Q5XKE5 535 aa12.44□□□□□ -0.42
ZNF558-207ENST00000601372 PI16Q6UXB8 463 aa12.44□□□□□ -0.42
ZNF558-207ENST00000601372 USP28Q96RU2 1077 aa12.44□□□□□ -0.42
ZNF558-207ENST00000601372 GBP3Q9H0R5 595 aa12.44□□□□□ -0.42
ZNF558-207ENST00000601372 MRVI1Q9Y6F6 885 aa12.44□□□□□ -0.42
ZNF558-207ENST00000601372 BMP15O95972 392 aa12.44□□□□□ -0.42
ZNF558-207ENST00000601372 HSPD1P10809 573 aaKnown RBP12.44□□□□□ -0.42
ZNF558-207ENST00000601372 NLRP12P59046 1061 aa12.44□□□□□ -0.42
ZNF558-207ENST00000601372 MYL5Q02045 173 aa12.44□□□□□ -0.42
ZNF558-207ENST00000601372 KRT26Q7Z3Y9 468 aa12.44□□□□□ -0.42
ZNF558-207ENST00000601372 ZSCAN10Q96SZ4 725 aaPredicted RBP12.44□□□□□ -0.42
ZNF558-207ENST00000601372 BCCIPQ9P287 314 aaKnown RBP eCLIP12.44□□□□□ -0.42
ZNF558-207ENST00000601372 ERLIN2O94905 339 aa12.44□□□□□ -0.42
ZNF558-207ENST00000601372 PTPN12Q05209 780 aaKnown RBP12.44□□□□□ -0.42
ZNF558-207ENST00000601372 SLC16A10Q8TF71 515 aa12.44□□□□□ -0.42
ZNF558-207ENST00000601372 CTAGE1Q96RT6 745 aa12.44□□□□□ -0.42
ZNF558-207ENST00000601372 RMND1Q9NWS8 449 aa12.44□□□□□ -0.42
ZNF558-207ENST00000601372 USO1O60763 962 aaKnown RBP12.44□□□□□ -0.42
ZNF558-207ENST00000601372 MCM6Q14566 821 aa12.44□□□□□ -0.42
ZNF558-207ENST00000601372 DSCC1Q9BVC3 393 aa12.44□□□□□ -0.42
ZNF558-207ENST00000601372 TDRD3Q9H7E2 651 aaKnown RBP12.44□□□□□ -0.42
ZNF558-207ENST00000601372 CNTNAP4Q9C0A0 1308 aa12.44□□□□□ -0.42
ZNF558-207ENST00000601372 SNAP23O00161 211 aa12.44□□□□□ -0.42
ZNF558-207ENST00000601372 CAMTA2O94983 1202 aa12.44□□□□□ -0.42
ZNF558-207ENST00000601372 IGKV5-2P06315 115 aa12.44□□□□□ -0.42
ZNF558-207ENST00000601372 PLEKHG2Q9H7P9 1386 aa12.44□□□□□ -0.42
ZNF558-207ENST00000601372 PTPN21Q16825 1174 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 BAG1Q99933 345 aaPredicted RBP12.43□□□□□ -0.42
ZNF558-207ENST00000601372 ADGRB1O14514 1584 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 KIAA0754O94854 1291 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 RHOXF2BP0C7M4 288 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 ELF2Q15723 593 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 PIK3AP1Q6ZUJ8 805 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 TAX1BP1Q86VP1 789 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 TRMT44Q8IYL2 757 aaKnown RBP12.43□□□□□ -0.42
ZNF558-207ENST00000601372 RHOXF2Q9BQY4 288 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 AZI2Q9H6S1 392 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 CD209Q9NNX6 404 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 CCDC175P0C221 793 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 USP14P54578 494 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 MAP4K1Q92918 833 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 NAP1L4Q99733 375 aaKnown RBP12.43□□□□□ -0.42
ZNF558-207ENST00000601372 LZTS2Q9BRK4 669 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 DEXIO95424 95 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 GOLGA8HP0CJ92 632 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 KRT40Q6A162 431 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 DTHD1Q6ZMT9 781 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 APOBEC3FQ8IUX4 373 aaKnown RBP12.43□□□□□ -0.42
ZNF558-207ENST00000601372 GUCA1BQ9UMX6 200 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 TMEM232C9JQI7 657 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 ZNF500O60304 480 aaPredicted RBP12.43□□□□□ -0.42
ZNF558-207ENST00000601372 ASIC1P78348 528 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 GPIHBP1Q8IV16 184 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 GPR108Q9NPR9 543 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 NEURL4Q96JN8 1562 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 TESPA1A2RU30 521 aaPredicted RBP12.43□□□□□ -0.42
ZNF558-207ENST00000601372 PHACTR2O75167 634 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 CCNA1P78396 465 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 LONRF3Q496Y0 759 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 MAP9Q49MG5 647 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 SLFN13Q68D06 897 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 ATL3Q6DD88 541 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 CTR9Q6PD62 1173 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 CCPG1Q9ULG6 757 aa12.43□□□□□ -0.42
ZNF558-207ENST00000601372 USP32Q8NFA0 1604 aa12.42□□□□□ -0.42
ZNF558-207ENST00000601372 RDXP35241 583 aaKnown RBP12.42□□□□□ -0.42
ZNF558-207ENST00000601372 PI4KBQ9UBF8 816 aa12.42□□□□□ -0.42
ZNF558-207ENST00000601372 HACL1Q9UJ83 578 aa12.42□□□□□ -0.42
ZNF558-207ENST00000601372 SIGLEC1Q9BZZ2 1709 aa12.42□□□□□ -0.42
ZNF558-207ENST00000601372 USP8P40818 1118 aa12.42□□□□□ -0.42
ZNF558-207ENST00000601372 CETN1Q12798 172 aa12.42□□□□□ -0.42
ZNF558-207ENST00000601372 FERMT2Q96AC1 680 aa12.42□□□□□ -0.42
ZNF558-207ENST00000601372 CUL4AQ13619 759 aa12.42□□□□□ -0.42
ZNF558-207ENST00000601372 PODNQ7Z5L7 613 aa12.42□□□□□ -0.42
ZNF558-207ENST00000601372 ISCA1Q9BUE6 129 aa12.42□□□□□ -0.42
ZNF558-207ENST00000601372 ATP8A2Q9NTI2 1148 aa12.42□□□□□ -0.42
ZNF558-207ENST00000601372 MEGF6O75095 1541 aa12.42□□□□□ -0.42
ZNF558-207ENST00000601372 CTAGE9A4FU28 777 aa12.42□□□□□ -0.42
ZNF558-207ENST00000601372 PFKFB2O60825 505 aa12.42□□□□□ -0.42
ZNF558-207ENST00000601372 RASGRF1Q13972 1273 aa12.42□□□□□ -0.42
ZNF558-207ENST00000601372 COL5A2P05997 1499 aaPredicted RBP12.42□□□□□ -0.42
ZNF558-207ENST00000601372 CDHR2Q9BYE9 1310 aa12.42□□□□□ -0.42
ZNF558-207ENST00000601372 NDUFA8P51970 172 aa12.41□□□□□ -0.42
ZNF558-207ENST00000601372 POLA2Q14181 598 aa12.41□□□□□ -0.42
ZNF558-207ENST00000601372 NCAPH2Q6IBW4 605 aa12.41□□□□□ -0.42
ZNF558-207ENST00000601372 FAM114A1Q8IWE2 563 aa12.41□□□□□ -0.42
ZNF558-207ENST00000601372 STAMQ92783 540 aa12.41□□□□□ -0.42
ZNF558-207ENST00000601372 XPO4Q9C0E2 1151 aaKnown RBP12.41□□□□□ -0.42
ZNF558-207ENST00000601372 VPS16Q9H269 839 aa12.41□□□□□ -0.42
ZNF558-207ENST00000601372 PDE4DQ08499 809 aa12.41□□□□□ -0.42
ZNF558-207ENST00000601372 CLIC6Q96NY7 704 aa12.41□□□□□ -0.42
ZNF558-207ENST00000601372 BCL2L12Q9HB09 334 aa12.41□□□□□ -0.42
ZNF558-207ENST00000601372 ARID5AQ03989 594 aa12.41□□□□□ -0.42
ZNF558-207ENST00000601372 EPHA10Q5JZY3 1008 aa12.41□□□□□ -0.42
ZNF558-207ENST00000601372 ALS2CR12Q96Q35 445 aa12.41□□□□□ -0.42
ZNF558-207ENST00000601372 MLXIPQ9HAP2 919 aa12.41□□□□□ -0.42
ZNF558-207ENST00000601372 M0QZ92 97 aa12.41□□□□□ -0.42
ZNF558-207ENST00000601372 KCTD1Q719H9 257 aa12.41□□□□□ -0.42
ZNF558-207ENST00000601372 DIS3L2Q8IYB7 885 aaKnown RBP12.41□□□□□ -0.42
ZNF558-207ENST00000601372 GLT8D2Q9H1C3 349 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms