RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	RILPL2	Q969X0	211 aa		18.48	■□□□□ 0.55
PLD3-223	ENST00000600948	PAGR1	Q9BTK6	254 aa		18.48	■□□□□ 0.55
PLD3-223	ENST00000600948	SH2D4A	Q9H788	454 aa		18.48	■□□□□ 0.55
PLD3-223	ENST00000600948	VCPKMT	Q9H867	229 aa		18.48	■□□□□ 0.55
PLD3-223	ENST00000600948	KANSL2	Q9H9L4	492 aa		18.48	■□□□□ 0.55
PLD3-223	ENST00000600948	MKNK2	Q9HBH9	465 aa		18.48	■□□□□ 0.55
PLD3-223	ENST00000600948	CNMD	O75829	334 aa		18.47	■□□□□ 0.55
PLD3-223	ENST00000600948	EEF2	P13639	858 aa	Known RBP	18.47	■□□□□ 0.55
PLD3-223	ENST00000600948		Q3C1V9	767 aa		18.47	■□□□□ 0.55
PLD3-223	ENST00000600948	SLAIN1	Q8ND83	568 aa		18.47	■□□□□ 0.55
PLD3-223	ENST00000600948	LPAR1	Q92633	364 aa		18.47	■□□□□ 0.55
PLD3-223	ENST00000600948	RABGAP1	Q9Y3P9	1069 aa		18.47	■□□□□ 0.55
PLD3-223	ENST00000600948	SPDYE16	A6NNV3	312 aa	Predicted RBP	18.46	■□□□□ 0.55
PLD3-223	ENST00000600948	ADCY3	O60266	1144 aa		18.46	■□□□□ 0.55
PLD3-223	ENST00000600948	PRDM1	O75626	825 aa		18.46	■□□□□ 0.55
PLD3-223	ENST00000600948	PDE4A	P27815	886 aa		18.46	■□□□□ 0.55
PLD3-223	ENST00000600948	PPARA	Q07869	468 aa		18.46	■□□□□ 0.55
PLD3-223	ENST00000600948	NMI	Q13287	307 aa	Predicted RBP	18.46	■□□□□ 0.55
PLD3-223	ENST00000600948	MCMDC2	Q4G0Z9	681 aa		18.46	■□□□□ 0.55
PLD3-223	ENST00000600948	VPS53	Q5VIR6	699 aa		18.46	■□□□□ 0.55
PLD3-223	ENST00000600948	GJD2	Q9UKL4	321 aa		18.46	■□□□□ 0.55
PLD3-223	ENST00000600948	COL11A1	P12107	1806 aa	Predicted RBP	18.45	■□□□□ 0.54
PLD3-223	ENST00000600948	IGKV6D-41	A0A0C4DH26	115 aa		18.45	■□□□□ 0.54
PLD3-223	ENST00000600948	MYC	P01106	439 aa	Predicted RBP	18.45	■□□□□ 0.54
PLD3-223	ENST00000600948	ATP2B2	Q01814	1243 aa		18.45	■□□□□ 0.54
PLD3-223	ENST00000600948	MTFR1	Q15390	333 aa		18.45	■□□□□ 0.54
PLD3-223	ENST00000600948	SPICE1	Q8N0Z3	855 aa		18.45	■□□□□ 0.54
PLD3-223	ENST00000600948	PXYLP1	Q8TE99	480 aa		18.45	■□□□□ 0.54
PLD3-223	ENST00000600948	TMEM106C	Q9BVX2	250 aa		18.45	■□□□□ 0.54
PLD3-223	ENST00000600948	TANGO6	Q9C0B7	1094 aa		18.45	■□□□□ 0.54
PLD3-223	ENST00000600948	PORCN	Q9H237	461 aa		18.45	■□□□□ 0.54
PLD3-223	ENST00000600948	ZNF287	Q9HBT7	754 aa		18.45	■□□□□ 0.54
PLD3-223	ENST00000600948	ELN	P15502	786 aa		18.44	■□□□□ 0.54
PLD3-223	ENST00000600948	SDS	P20132	328 aa		18.44	■□□□□ 0.54
PLD3-223	ENST00000600948	MAPK4	P31152	587 aa		18.44	■□□□□ 0.54
PLD3-223	ENST00000600948	COG2	Q14746	738 aa		18.44	■□□□□ 0.54
PLD3-223	ENST00000600948	ALX1	Q15699	326 aa		18.44	■□□□□ 0.54
PLD3-223	ENST00000600948	ZNF589	Q86UQ0	364 aa	Predicted RBP	18.44	■□□□□ 0.54
PLD3-223	ENST00000600948	ZNF444	Q8N0Y2	327 aa	Predicted RBP	18.44	■□□□□ 0.54
PLD3-223	ENST00000600948	BTBD7	Q9P203	1132 aa		18.44	■□□□□ 0.54
PLD3-223	ENST00000600948	NYAP2	Q9P242	653 aa		18.44	■□□□□ 0.54
PLD3-223	ENST00000600948	PLIN4	Q96Q06	1357 aa		18.43	■□□□□ 0.54
PLD3-223	ENST00000600948	WDR46	O15213	610 aa	Known RBP	18.43	■□□□□ 0.54
PLD3-223	ENST00000600948	EN2	P19622	333 aa	Predicted RBP	18.43	■□□□□ 0.54
PLD3-223	ENST00000600948	PDE4B	Q07343	736 aa		18.43	■□□□□ 0.54
PLD3-223	ENST00000600948	BIN2	Q9UBW5	565 aa	Predicted RBP	18.43	■□□□□ 0.54
PLD3-223	ENST00000600948	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	18.43	■□□□□ 0.54
PLD3-223	ENST00000600948	CCDC171	Q6TFL3	1326 aa		18.43	■□□□□ 0.54
PLD3-223	ENST00000600948	SLC3A2	P08195	630 aa	Known RBP	18.42	■□□□□ 0.54
PLD3-223	ENST00000600948	HSPD1	P10809	573 aa	Known RBP	18.42	■□□□□ 0.54
PLD3-223	ENST00000600948	DSG3	P32926	999 aa		18.42	■□□□□ 0.54
PLD3-223	ENST00000600948	UBXN2A	P68543	259 aa		18.42	■□□□□ 0.54
PLD3-223	ENST00000600948	CTDSPL2	Q05D32	466 aa		18.42	■□□□□ 0.54
PLD3-223	ENST00000600948	GPR142	Q7Z601	462 aa		18.42	■□□□□ 0.54
PLD3-223	ENST00000600948	NEDD1	Q8NHV4	660 aa		18.42	■□□□□ 0.54
PLD3-223	ENST00000600948	GOPC	Q9HD26	462 aa		18.42	■□□□□ 0.54
PLD3-223	ENST00000600948	HOXC10	Q9NYD6	342 aa		18.42	■□□□□ 0.54
PLD3-223	ENST00000600948	ANAPC4	Q9UJX5	808 aa		18.42	■□□□□ 0.54
PLD3-223	ENST00000600948	ZMYM6	O95789	1325 aa		18.42	■□□□□ 0.54
PLD3-223	ENST00000600948	FLOT1	O75955	427 aa		18.41	■□□□□ 0.54
PLD3-223	ENST00000600948	INHA	P05111	366 aa		18.41	■□□□□ 0.54
PLD3-223	ENST00000600948	CCL5	P13501	91 aa		18.41	■□□□□ 0.54
PLD3-223	ENST00000600948	CCNA1	P78396	465 aa		18.41	■□□□□ 0.54
PLD3-223	ENST00000600948	PLEKHH3	Q7Z736	793 aa		18.41	■□□□□ 0.54
PLD3-223	ENST00000600948	SOCS4	Q8WXH5	440 aa		18.41	■□□□□ 0.54
PLD3-223	ENST00000600948	USP6NL	Q92738	828 aa		18.41	■□□□□ 0.54
PLD3-223	ENST00000600948	CEP95	Q96GE4	821 aa		18.41	■□□□□ 0.54
PLD3-223	ENST00000600948	MTMR4	Q9NYA4	1195 aa		18.41	■□□□□ 0.54
PLD3-223	ENST00000600948	TACC3	Q9Y6A5	838 aa		18.41	■□□□□ 0.54
PLD3-223	ENST00000600948	LAMA4	Q16363	1823 aa		18.41	■□□□□ 0.54
PLD3-223	ENST00000600948	FGA	P02671	866 aa		18.4	■□□□□ 0.54
PLD3-223	ENST00000600948	FAM47A	Q5JRC9	791 aa		18.4	■□□□□ 0.54
PLD3-223	ENST00000600948	MORN1	Q5T089	497 aa		18.4	■□□□□ 0.54
PLD3-223	ENST00000600948	CCAR1	Q8IX12	1150 aa	Known RBP	18.4	■□□□□ 0.54
PLD3-223	ENST00000600948	ATG4C	Q96DT6	458 aa		18.4	■□□□□ 0.54
PLD3-223	ENST00000600948	NUDT12	Q9BQG2	462 aa		18.4	■□□□□ 0.54
PLD3-223	ENST00000600948	INCENP	Q9NQS7	918 aa		18.4	■□□□□ 0.54
PLD3-223	ENST00000600948	CLIP2	Q9UDT6	1046 aa		18.4	■□□□□ 0.54
PLD3-223	ENST00000600948	BRCA2	P51587	3418 aa		18.4	■□□□□ 0.54
PLD3-223	ENST00000600948	ZNF236	Q9UL36	1845 aa		18.39	■□□□□ 0.54
PLD3-223	ENST00000600948	TSPY3	P0CV98	308 aa		18.39	■□□□□ 0.53
PLD3-223	ENST00000600948	TSPY8	P0CW00	308 aa		18.39	■□□□□ 0.53
PLD3-223	ENST00000600948	GSPT1	P15170	499 aa	Known RBP	18.39	■□□□□ 0.53
PLD3-223	ENST00000600948	TFAP4	Q01664	338 aa		18.39	■□□□□ 0.53
PLD3-223	ENST00000600948	FAM83B	Q5T0W9	1011 aa		18.39	■□□□□ 0.53
PLD3-223	ENST00000600948	TTC22	Q5TAA0	569 aa		18.39	■□□□□ 0.53
PLD3-223	ENST00000600948	MB21D1	Q8N884	522 aa		18.39	■□□□□ 0.53
PLD3-223	ENST00000600948	MKL1	Q969V6	931 aa		18.39	■□□□□ 0.53
PLD3-223	ENST00000600948	MOV10L1	Q9BXT6	1211 aa	Known RBP	18.39	■□□□□ 0.53
PLD3-223	ENST00000600948	RNF208	Q9H0X6	261 aa		18.39	■□□□□ 0.53
PLD3-223	ENST00000600948	UNC93B1	Q9H1C4	597 aa		18.39	■□□□□ 0.53
PLD3-223	ENST00000600948	DIAPH3	Q9NSV4	1193 aa		18.39	■□□□□ 0.53
PLD3-223	ENST00000600948	FBXO28	Q9NVF7	368 aa		18.39	■□□□□ 0.53
PLD3-223	ENST00000600948		F5H6K3	240 aa		18.38	■□□□□ 0.53
PLD3-223	ENST00000600948	HIP1	O00291	1037 aa		18.38	■□□□□ 0.53
PLD3-223	ENST00000600948	RAD21	O60216	631 aa		18.38	■□□□□ 0.53
PLD3-223	ENST00000600948	TTLL1	O95922	423 aa		18.38	■□□□□ 0.53
PLD3-223	ENST00000600948	NDUFB10	O96000	172 aa		18.38	■□□□□ 0.53
PLD3-223	ENST00000600948	HMGCR	P04035	888 aa		18.38	■□□□□ 0.53
PLD3-223	ENST00000600948	GJB1	P08034	283 aa		18.38	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms