RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 H7C1D1 291 aa17.6■□□□□ 0.41
VRK3-218ENST00000600031 MPHOSPH10O00566 681 aaKnown RBP17.6■□□□□ 0.41
VRK3-218ENST00000600031 FUT2Q10981 343 aa17.6■□□□□ 0.41
VRK3-218ENST00000600031 CTCFLQ8NI51 663 aaPredicted RBP17.6■□□□□ 0.41
VRK3-218ENST00000600031 SYAP1Q96A49 352 aaPredicted RBP17.6■□□□□ 0.41
VRK3-218ENST00000600031 PDLIM2Q96JY6 352 aa17.6■□□□□ 0.41
VRK3-218ENST00000600031 GREB1LQ9C091 1923 aaPredicted RBP17.59■□□□□ 0.41
VRK3-218ENST00000600031 STK36Q9NRP7 1315 aa17.59■□□□□ 0.41
VRK3-218ENST00000600031 TOP1P11387 765 aaKnown RBP17.59■□□□□ 0.41
VRK3-218ENST00000600031 GUCY1A2P33402 732 aa17.59■□□□□ 0.41
VRK3-218ENST00000600031 C9orf131Q5VYM1 1079 aa17.59■□□□□ 0.41
VRK3-218ENST00000600031 OTUD7BQ6GQQ9 843 aa17.59■□□□□ 0.41
VRK3-218ENST00000600031 TMTC3Q6ZXV5 915 aa17.59■□□□□ 0.41
VRK3-218ENST00000600031 DDNO94850 711 aaPredicted RBP17.59■□□□□ 0.41
VRK3-218ENST00000600031 MSNP26038 577 aaKnown RBP17.59■□□□□ 0.41
VRK3-218ENST00000600031 RASA3Q14644 834 aa17.59■□□□□ 0.41
VRK3-218ENST00000600031 RRP1BQ14684 758 aaKnown RBP17.59■□□□□ 0.41
VRK3-218ENST00000600031 SRBD1Q8N5C6 995 aaKnown RBP17.59■□□□□ 0.41
VRK3-218ENST00000600031 C8orf76Q96K31 380 aa17.59■□□□□ 0.41
VRK3-218ENST00000600031 MAP3K14Q99558 947 aa17.59■□□□□ 0.41
VRK3-218ENST00000600031 ALG1Q9BT22 464 aa17.59■□□□□ 0.41
VRK3-218ENST00000600031 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.59■□□□□ 0.41
VRK3-218ENST00000600031 MTMR7Q9Y216 660 aa17.59■□□□□ 0.41
VRK3-218ENST00000600031 EPS15P42566 896 aa17.58■□□□□ 0.4
VRK3-218ENST00000600031 RASGRP2Q7LDG7 609 aa17.58■□□□□ 0.4
VRK3-218ENST00000600031 TRPM4Q8TD43 1214 aa17.58■□□□□ 0.4
VRK3-218ENST00000600031 CLIP2Q9UDT6 1046 aa17.58■□□□□ 0.4
VRK3-218ENST00000600031 HERC5Q9UII4 1024 aaKnown RBP17.58■□□□□ 0.4
VRK3-218ENST00000600031 HACL1Q9UJ83 578 aa17.58■□□□□ 0.4
VRK3-218ENST00000600031 TCHHQ07283 1943 aa17.58■□□□□ 0.4
VRK3-218ENST00000600031 GDF11O95390 407 aa17.57■□□□□ 0.4
VRK3-218ENST00000600031 RESTQ13127 1097 aa17.57■□□□□ 0.4
VRK3-218ENST00000600031 GRM4Q14833 912 aa17.57■□□□□ 0.4
VRK3-218ENST00000600031 GPR162Q16538 588 aa17.57■□□□□ 0.4
VRK3-218ENST00000600031 TRIM22Q8IYM9 498 aa17.57■□□□□ 0.4
VRK3-218ENST00000600031 STAG2Q8N3U4 1231 aa17.57■□□□□ 0.4
VRK3-218ENST00000600031 FBXO18Q8NFZ0 1043 aa17.57■□□□□ 0.4
VRK3-218ENST00000600031 MAD2L2Q9UI95 211 aa17.57■□□□□ 0.4
VRK3-218ENST00000600031 TTLL1O95922 423 aa17.57■□□□□ 0.4
VRK3-218ENST00000600031 KIF5BP33176 963 aa17.57■□□□□ 0.4
VRK3-218ENST00000600031 TNNI2P48788 182 aa17.57■□□□□ 0.4
VRK3-218ENST00000600031 JAG1P78504 1218 aa17.57■□□□□ 0.4
VRK3-218ENST00000600031 FAM173BQ6P4H8 233 aa17.57■□□□□ 0.4
VRK3-218ENST00000600031 LRRC47Q8N1G4 583 aaKnown RBP17.57■□□□□ 0.4
VRK3-218ENST00000600031 SYCE3A1L190 88 aa17.56■□□□□ 0.4
VRK3-218ENST00000600031 ABCB5Q2M3G0 1257 aa17.56■□□□□ 0.4
VRK3-218ENST00000600031 MIGA2Q7L4E1 593 aa17.56■□□□□ 0.4
VRK3-218ENST00000600031 RNF26Q9BY78 433 aaPredicted RBP17.56■□□□□ 0.4
VRK3-218ENST00000600031 ATP6V1DQ9Y5K8 247 aa17.56■□□□□ 0.4
VRK3-218ENST00000600031 BAZ2BQ9UIF8 2168 aaKnown RBP17.56■□□□□ 0.4
VRK3-218ENST00000600031 CNTNAP5Q8WYK1 1306 aa17.56■□□□□ 0.4
VRK3-218ENST00000600031 hCG_1642624A0A1W2PR95 340 aa17.56■□□□□ 0.4
VRK3-218ENST00000600031 DEXIO95424 95 aa17.56■□□□□ 0.4
VRK3-218ENST00000600031 DNM1Q05193 864 aaKnown RBP17.56■□□□□ 0.4
VRK3-218ENST00000600031 SEPT2Q15019 361 aa17.56■□□□□ 0.4
VRK3-218ENST00000600031 TEPSINQ96N21 525 aa17.56■□□□□ 0.4
VRK3-218ENST00000600031 V9GY48 417 aaPredicted RBP17.56■□□□□ 0.4
VRK3-218ENST00000600031 PALM3A6NDB9 673 aaPredicted RBP17.55■□□□□ 0.4
VRK3-218ENST00000600031 PRPF3O43395 683 aaKnown RBP17.55■□□□□ 0.4
VRK3-218ENST00000600031 TBC1D12O60347 775 aa17.55■□□□□ 0.4
VRK3-218ENST00000600031 HIRAP54198 1017 aaPredicted RBP17.55■□□□□ 0.4
VRK3-218ENST00000600031 TNFAIP1Q13829 316 aa17.55■□□□□ 0.4
VRK3-218ENST00000600031 TMEM179Q6ZVK1 233 aa17.55■□□□□ 0.4
VRK3-218ENST00000600031 MYH6P13533 1939 aa17.55■□□□□ 0.4
VRK3-218ENST00000600031 GH2P01242 217 aa17.54■□□□□ 0.4
VRK3-218ENST00000600031 GOLGA8HP0CJ92 632 aa17.54■□□□□ 0.4
VRK3-218ENST00000600031 ATP2B2Q01814 1243 aa17.54■□□□□ 0.4
VRK3-218ENST00000600031 PKN1Q16512 942 aa17.54■□□□□ 0.4
VRK3-218ENST00000600031 USP17L2Q6R6M4 530 aa17.54■□□□□ 0.4
VRK3-218ENST00000600031 SIAH1Q8IUQ4 282 aa17.54■□□□□ 0.4
VRK3-218ENST00000600031 WASF1Q92558 559 aa17.54■□□□□ 0.4
VRK3-218ENST00000600031 KANSL2Q9H9L4 492 aa17.54■□□□□ 0.4
VRK3-218ENST00000600031 GDPD2Q9HCC8 539 aa17.54■□□□□ 0.4
VRK3-218ENST00000600031 CNPY2Q9Y2B0 182 aa17.54■□□□□ 0.4
VRK3-218ENST00000600031 USP17L5A8MUK1 530 aa17.54■□□□□ 0.4
VRK3-218ENST00000600031 AKAP17AQ02040 695 aaKnown RBP17.54■□□□□ 0.4
VRK3-218ENST00000600031 SLC35G1Q2M3R5 365 aa17.54■□□□□ 0.4
VRK3-218ENST00000600031 ANGEL2Q5VTE6 544 aaKnown RBP17.54■□□□□ 0.4
VRK3-218ENST00000600031 KRT40Q6A162 431 aa17.54■□□□□ 0.4
VRK3-218ENST00000600031 DEFB129Q9H1M3 183 aa17.54■□□□□ 0.4
VRK3-218ENST00000600031 ZSCAN16Q9H4T2 348 aaPredicted RBP17.54■□□□□ 0.4
VRK3-218ENST00000600031 NOL7Q9UMY1 257 aaKnown RBP17.54■□□□□ 0.4
VRK3-218ENST00000600031 MYH4Q9Y623 1939 aa17.54■□□□□ 0.4
VRK3-218ENST00000600031 TPM2P07951 284 aa17.53■□□□□ 0.4
VRK3-218ENST00000600031 PDHBP11177 359 aa17.53■□□□□ 0.4
VRK3-218ENST00000600031 EEF2P13639 858 aaKnown RBP17.53■□□□□ 0.4
VRK3-218ENST00000600031 GNAQP50148 359 aa17.53■□□□□ 0.4
VRK3-218ENST00000600031 MAP3K10Q02779 954 aa17.53■□□□□ 0.4
VRK3-218ENST00000600031 TMEM87AQ8NBN3 555 aa17.53■□□□□ 0.4
VRK3-218ENST00000600031 RGS22Q8NE09 1264 aa17.53■□□□□ 0.4
VRK3-218ENST00000600031 PARP1P09874 1014 aaKnown RBP17.53■□□□□ 0.4
VRK3-218ENST00000600031 PIBF1Q8WXW3 757 aa17.53■□□□□ 0.4
VRK3-218ENST00000600031 TSPY26PQ9H489 355 aa17.53■□□□□ 0.4
VRK3-218ENST00000600031 NYAP2Q9P242 653 aa17.53■□□□□ 0.4
VRK3-218ENST00000600031 KLRF2D3W0D1 207 aa17.52■□□□□ 0.4
VRK3-218ENST00000600031 CYTH3O43739 400 aa17.52■□□□□ 0.4
VRK3-218ENST00000600031 ICA1Q05084 483 aa17.52■□□□□ 0.4
VRK3-218ENST00000600031 PPP4R3BQ5MIZ7 849 aa17.52■□□□□ 0.4
VRK3-218ENST00000600031 MKL1Q969V6 931 aa17.52■□□□□ 0.4
VRK3-218ENST00000600031 SHISA4Q96DD7 197 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms