RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 SDSP20132 328 aa33.53■■■□□ 2.96
ZNF558-206ENST00000599938 PDE4BQ07343 736 aa33.53■■■□□ 2.96
ZNF558-206ENST00000599938 ZNF589Q86UQ0 364 aaPredicted RBP33.53■■■□□ 2.96
ZNF558-206ENST00000599938 ZNF444Q8N0Y2 327 aaPredicted RBP33.53■■■□□ 2.96
ZNF558-206ENST00000599938 RBPJLQ9UBG7 517 aa33.53■■■□□ 2.96
ZNF558-206ENST00000599938 FLT3LGP49771 235 aa33.52■■■□□ 2.96
ZNF558-206ENST00000599938 ERVK-9P63128 1117 aa33.52■■■□□ 2.96
ZNF558-206ENST00000599938 ERVK-24P63145 666 aa33.52■■■□□ 2.96
ZNF558-206ENST00000599938 KIAA1755Q5JYT7 1200 aa33.52■■■□□ 2.96
ZNF558-206ENST00000599938 SPICE1Q8N0Z3 855 aa33.52■■■□□ 2.96
ZNF558-206ENST00000599938 RBBP6Q7Z6E9 1792 aaKnown RBP33.52■■■□□ 2.96
ZNF558-206ENST00000599938 CCDC171Q6TFL3 1326 aa33.52■■■□□ 2.96
ZNF558-206ENST00000599938 GRK4P32298 578 aa33.51■■■□□ 2.95
ZNF558-206ENST00000599938 MLLT1Q03111 559 aaPredicted RBP33.51■■■□□ 2.95
ZNF558-206ENST00000599938 DIAPH3Q9NSV4 1193 aa33.51■■■□□ 2.95
ZNF558-206ENST00000599938 POTEEQ6S8J3 1075 aa33.5■■■□□ 2.95
ZNF558-206ENST00000599938 SPDYE16A6NNV3 312 aaPredicted RBP33.49■■■□□ 2.95
ZNF558-206ENST00000599938 MYCP01106 439 aaPredicted RBP33.49■■■□□ 2.95
ZNF558-206ENST00000599938 SLAIN1Q8ND83 568 aa33.49■■■□□ 2.95
ZNF558-206ENST00000599938 GOPCQ9HD26 462 aa33.49■■■□□ 2.95
ZNF558-206ENST00000599938 RABGAP1Q9Y3P9 1069 aa33.49■■■□□ 2.95
ZNF558-206ENST00000599938 WDR46O15213 610 aaKnown RBP33.48■■■□□ 2.95
ZNF558-206ENST00000599938 ALX1Q15699 326 aa33.48■■■□□ 2.95
ZNF558-206ENST00000599938 LBX2Q6XYB7 198 aa33.48■■■□□ 2.95
ZNF558-206ENST00000599938 CCAR1Q8IX12 1150 aaKnown RBP33.48■■■□□ 2.95
ZNF558-206ENST00000599938 PLIN4Q96Q06 1357 aa33.47■■■□□ 2.95
ZNF558-206ENST00000599938 HIP1O00291 1037 aa33.47■■■□□ 2.95
ZNF558-206ENST00000599938 RAD21O60216 631 aa33.47■■■□□ 2.95
ZNF558-206ENST00000599938 MFAP1P55081 439 aaKnown RBP33.47■■■□□ 2.95
ZNF558-206ENST00000599938 IRF5Q13568 498 aa33.47■■■□□ 2.95
ZNF558-206ENST00000599938 TTC22Q5TAA0 569 aa33.47■■■□□ 2.95
ZNF558-206ENST00000599938 TMEM106CQ9BVX2 250 aa33.47■■■□□ 2.95
ZNF558-206ENST00000599938 MYH4Q9Y623 1939 aa33.46■■■□□ 2.95
ZNF558-206ENST00000599938 A0A0G2JMZ2 1700 aa33.46■■■□□ 2.95
ZNF558-206ENST00000599938 POTEFA5A3E0 1075 aa33.46■■■□□ 2.95
ZNF558-206ENST00000599938 ADCY3O60266 1144 aa33.46■■■□□ 2.95
ZNF558-206ENST00000599938 CNMDO75829 334 aa33.46■■■□□ 2.95
ZNF558-206ENST00000599938 TSPY3P0CV98 308 aa33.46■■■□□ 2.95
ZNF558-206ENST00000599938 TSPY8P0CW00 308 aa33.46■■■□□ 2.95
ZNF558-206ENST00000599938 HSPD1P10809 573 aaKnown RBP33.46■■■□□ 2.95
ZNF558-206ENST00000599938 CTDSPL2Q05D32 466 aa33.46■■■□□ 2.95
ZNF558-206ENST00000599938 Q3C1V9 767 aa33.46■■■□□ 2.95
ZNF558-206ENST00000599938 CWC27Q6UX04 472 aaKnown RBP33.46■■■□□ 2.95
ZNF558-206ENST00000599938 PORCNQ9H237 461 aa33.46■■■□□ 2.95
ZNF558-206ENST00000599938 BIN2Q9UBW5 565 aaPredicted RBP33.46■■■□□ 2.95
ZNF558-206ENST00000599938 RLFQ13129 1914 aa33.45■■■□□ 2.95
ZNF558-206ENST00000599938 IGKV6D-41A0A0C4DH26 115 aa33.45■■■□□ 2.95
ZNF558-206ENST00000599938 FLOT1O75955 427 aa33.45■■■□□ 2.95
ZNF558-206ENST00000599938 GSPT1P15170 499 aaKnown RBP33.45■■■□□ 2.95
ZNF558-206ENST00000599938 MAPK4P31152 587 aa33.45■■■□□ 2.95
ZNF558-206ENST00000599938 CCNA1P78396 465 aa33.45■■■□□ 2.95
ZNF558-206ENST00000599938 COG2Q14746 738 aa33.45■■■□□ 2.95
ZNF558-206ENST00000599938 CEP95Q96GE4 821 aa33.45■■■□□ 2.95
ZNF558-206ENST00000599938 NYAP2Q9P242 653 aa33.45■■■□□ 2.95
ZNF558-206ENST00000599938 ZMYM6O95789 1325 aa33.45■■■□□ 2.95
ZNF558-206ENST00000599938 FGAP02671 866 aa33.44■■■□□ 2.94
ZNF558-206ENST00000599938 FAM47AQ5JRC9 791 aa33.44■■■□□ 2.94
ZNF558-206ENST00000599938 CWC22Q9HCG8 908 aaKnown RBP33.44■■■□□ 2.94
ZNF558-206ENST00000599938 HOXC10Q9NYD6 342 aa33.44■■■□□ 2.94
ZNF558-206ENST00000599938 ANAPC4Q9UJX5 808 aa33.44■■■□□ 2.94
ZNF558-206ENST00000599938 DDX52Q9Y2R4 599 aaKnown RBP eCLIP33.44■■■□□ 2.94
ZNF558-206ENST00000599938 PARP14Q460N5 1801 aa33.44■■■□□ 2.94
ZNF558-206ENST00000599938 ELNP15502 786 aa33.43■■■□□ 2.94
ZNF558-206ENST00000599938 NEDD1Q8NHV4 660 aa33.43■■■□□ 2.94
ZNF558-206ENST00000599938 SOCS4Q8WXH5 440 aa33.43■■■□□ 2.94
ZNF558-206ENST00000599938 BTBD7Q9P203 1132 aa33.43■■■□□ 2.94
ZNF558-206ENST00000599938 PLXNB2O15031 1838 aa33.43■■■□□ 2.94
ZNF558-206ENST00000599938 UBXN2AP68543 259 aa33.42■■■□□ 2.94
ZNF558-206ENST00000599938 TFAP4Q01664 338 aa33.42■■■□□ 2.94
ZNF558-206ENST00000599938 PXYLP1Q8TE99 480 aa33.42■■■□□ 2.94
ZNF558-206ENST00000599938 MTMR4Q9NYA4 1195 aa33.42■■■□□ 2.94
ZNF558-206ENST00000599938 CLIP2Q9UDT6 1046 aa33.42■■■□□ 2.94
ZNF558-206ENST00000599938 MTFR1Q15390 333 aa33.41■■■□□ 2.94
ZNF558-206ENST00000599938 SAMD1Q6SPF0 538 aaPredicted RBP33.41■■■□□ 2.94
ZNF558-206ENST00000599938 GJD2Q9UKL4 321 aa33.41■■■□□ 2.94
ZNF558-206ENST00000599938 TNRC18O15417 2968 aaPredicted RBP33.41■■■□□ 2.94
ZNF558-206ENST00000599938 TTLL1O95922 423 aa33.4■■■□□ 2.94
ZNF558-206ENST00000599938 DSG3P32926 999 aa33.4■■■□□ 2.94
ZNF558-206ENST00000599938 FAM83BQ5T0W9 1011 aa33.4■■■□□ 2.94
ZNF558-206ENST00000599938 GPR142Q7Z601 462 aa33.4■■■□□ 2.94
ZNF558-206ENST00000599938 INCENPQ9NQS7 918 aa33.4■■■□□ 2.94
ZNF558-206ENST00000599938 TSPY2A6NKD2 308 aa33.39■■■□□ 2.94
ZNF558-206ENST00000599938 INHAP05111 366 aa33.39■■■□□ 2.94
ZNF558-206ENST00000599938 WDR78Q5VTH9 848 aa33.39■■■□□ 2.94
ZNF558-206ENST00000599938 PLEKHH3Q7Z736 793 aa33.39■■■□□ 2.94
ZNF558-206ENST00000599938 MB21D1Q8N884 522 aa33.39■■■□□ 2.94
ZNF558-206ENST00000599938 ATG4CQ96DT6 458 aa33.39■■■□□ 2.94
ZNF558-206ENST00000599938 NUDT12Q9BQG2 462 aa33.39■■■□□ 2.94
ZNF558-206ENST00000599938 MKI67P46013 3256 aaKnown RBP33.39■■■□□ 2.94
ZNF558-206ENST00000599938 NDUFB10O96000 172 aa33.38■■■□□ 2.93
ZNF558-206ENST00000599938 HAND2P61296 217 aa33.38■■■□□ 2.93
ZNF558-206ENST00000599938 LRRC47Q8N1G4 583 aaKnown RBP33.38■■■□□ 2.93
ZNF558-206ENST00000599938 TOMM22Q9NS69 142 aa33.38■■■□□ 2.93
ZNF558-206ENST00000599938 LAMA4Q16363 1823 aa33.37■■■□□ 2.93
ZNF558-206ENST00000599938 F5H6K3 240 aa33.37■■■□□ 2.93
ZNF558-206ENST00000599938 ORC4O43929 436 aa33.37■■■□□ 2.93
ZNF558-206ENST00000599938 RANBP6O60518 1105 aaKnown RBP33.37■■■□□ 2.93
ZNF558-206ENST00000599938 KLRC3Q07444 240 aa33.37■■■□□ 2.93
ZNF558-206ENST00000599938 NUP88Q99567 741 aaPredicted RBP33.37■■■□□ 2.93
ZNF558-206ENST00000599938 FBXO28Q9NVF7 368 aa33.37■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms