RNA–Protein interactions for RNA: ENST00000599880.1

SIN3B-210, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-210ENST00000599880 HMGCRP04035 888 aa13.06□□□□□ -0.32
SIN3B-210ENST00000599880 PDE1AP54750 535 aa13.06□□□□□ -0.32
SIN3B-210ENST00000599880 Q3C1V9 767 aa13.06□□□□□ -0.32
SIN3B-210ENST00000599880 ZMYM1Q5SVZ6 1142 aa13.06□□□□□ -0.32
SIN3B-210ENST00000599880 SIAH1Q8IUQ4 282 aa13.06□□□□□ -0.32
SIN3B-210ENST00000599880 SMC5Q8IY18 1101 aa13.06□□□□□ -0.32
SIN3B-210ENST00000599880 PAGR1Q9BTK6 254 aa13.06□□□□□ -0.32
SIN3B-210ENST00000599880 VCPKMTQ9H867 229 aa13.06□□□□□ -0.32
SIN3B-210ENST00000599880 ZNF287Q9HBT7 754 aa13.06□□□□□ -0.32
SIN3B-210ENST00000599880 EPB41L4AQ9HCS5 686 aaPredicted RBP13.06□□□□□ -0.32
SIN3B-210ENST00000599880 PAK6Q9NQU5 681 aaPredicted RBP13.06□□□□□ -0.32
SIN3B-210ENST00000599880 HOXC10Q9NYD6 342 aa13.06□□□□□ -0.32
SIN3B-210ENST00000599880 PATL2C9JE40 543 aaKnown RBP13.05□□□□□ -0.32
SIN3B-210ENST00000599880 WDR46O15213 610 aaKnown RBP13.05□□□□□ -0.32
SIN3B-210ENST00000599880 CNMDO75829 334 aa13.05□□□□□ -0.32
SIN3B-210ENST00000599880 RASA1P20936 1047 aa13.05□□□□□ -0.32
SIN3B-210ENST00000599880 TDO2P48775 406 aa13.05□□□□□ -0.32
SIN3B-210ENST00000599880 COG2Q14746 738 aa13.05□□□□□ -0.32
SIN3B-210ENST00000599880 GPR142Q7Z601 462 aa13.05□□□□□ -0.32
SIN3B-210ENST00000599880 PLEKHH3Q7Z736 793 aa13.05□□□□□ -0.32
SIN3B-210ENST00000599880 CCAR1Q8IX12 1150 aaKnown RBP13.05□□□□□ -0.32
SIN3B-210ENST00000599880 TRMT44Q8IYL2 757 aaKnown RBP13.05□□□□□ -0.32
SIN3B-210ENST00000599880 U2AF1L4Q8WU68 220 aaKnown RBP13.05□□□□□ -0.32
SIN3B-210ENST00000599880 USP6NLQ92738 828 aa13.05□□□□□ -0.32
SIN3B-210ENST00000599880 EVI5LQ96CN4 794 aa13.05□□□□□ -0.32
SIN3B-210ENST00000599880 NACAP1Q9BZK3 213 aa13.05□□□□□ -0.32
SIN3B-210ENST00000599880 UNC93B1Q9H1C4 597 aa13.05□□□□□ -0.32
SIN3B-210ENST00000599880 PORCNQ9H237 461 aa13.05□□□□□ -0.32
SIN3B-210ENST00000599880 RWDD1Q9H446 243 aaPredicted RBP13.05□□□□□ -0.32
SIN3B-210ENST00000599880 ZNFX1Q9P2E3 1918 aaKnown RBP13.05□□□□□ -0.32
SIN3B-210ENST00000599880 MINDY4BA8MYZ0 360 aa13.04□□□□□ -0.32
SIN3B-210ENST00000599880 PEX10O60683 326 aa13.04□□□□□ -0.32
SIN3B-210ENST00000599880 SGPL1O95470 568 aa13.04□□□□□ -0.32
SIN3B-210ENST00000599880 RGS2P41220 211 aa13.04□□□□□ -0.32
SIN3B-210ENST00000599880 MORN1Q5T089 497 aa13.04□□□□□ -0.32
SIN3B-210ENST00000599880 UBE2Q1Q7Z7E8 422 aa13.04□□□□□ -0.32
SIN3B-210ENST00000599880 CLEC10AQ8IUN9 316 aa13.04□□□□□ -0.32
SIN3B-210ENST00000599880 IFNL3Q8IZI9 196 aa13.04□□□□□ -0.32
SIN3B-210ENST00000599880 MB21D1Q8N884 522 aa13.04□□□□□ -0.32
SIN3B-210ENST00000599880 APBA2Q99767 749 aa13.04□□□□□ -0.32
SIN3B-210ENST00000599880 TANGO6Q9C0B7 1094 aa13.04□□□□□ -0.32
SIN3B-210ENST00000599880 MKNK2Q9HBH9 465 aa13.04□□□□□ -0.32
SIN3B-210ENST00000599880 PLIN4Q96Q06 1357 aa13.04□□□□□ -0.32
SIN3B-210ENST00000599880 APPP05067 770 aa13.03□□□□□ -0.32
SIN3B-210ENST00000599880 EEF2P13639 858 aaKnown RBP13.03□□□□□ -0.32
SIN3B-210ENST00000599880 KIAA1755Q5JYT7 1200 aa13.03□□□□□ -0.32
SIN3B-210ENST00000599880 MAP3K21Q5TCX8 1036 aa13.03□□□□□ -0.32
SIN3B-210ENST00000599880 TRIB2Q92519 343 aa13.03□□□□□ -0.32
SIN3B-210ENST00000599880 SEC62Q99442 399 aaKnown RBP13.03□□□□□ -0.32
SIN3B-210ENST00000599880 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.03□□□□□ -0.32
SIN3B-210ENST00000599880 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.03□□□□□ -0.32
SIN3B-210ENST00000599880 CWC22Q9HCG8 908 aaKnown RBP13.03□□□□□ -0.32
SIN3B-210ENST00000599880 GOPCQ9HD26 462 aa13.03□□□□□ -0.32
SIN3B-210ENST00000599880 BTBD7Q9P203 1132 aa13.03□□□□□ -0.32
SIN3B-210ENST00000599880 NYAP2Q9P242 653 aa13.03□□□□□ -0.32
SIN3B-210ENST00000599880 RPTORQ8N122 1335 aa13.03□□□□□ -0.32
SIN3B-210ENST00000599880 PLXNA1Q9UIW2 1896 aa13.03□□□□□ -0.32
SIN3B-210ENST00000599880 LAMA4Q16363 1823 aa13.02□□□□□ -0.32
SIN3B-210ENST00000599880 ALPK3Q96L96 1907 aa13.02□□□□□ -0.32
SIN3B-210ENST00000599880 SLC15A5A6NIM6 579 aa13.02□□□□□ -0.33
SIN3B-210ENST00000599880 HOXC6P09630 235 aa13.02□□□□□ -0.33
SIN3B-210ENST00000599880 CYP2B6P20813 491 aa13.02□□□□□ -0.33
SIN3B-210ENST00000599880 DSG3P32926 999 aa13.02□□□□□ -0.33
SIN3B-210ENST00000599880 PDE4BQ07343 736 aa13.02□□□□□ -0.33
SIN3B-210ENST00000599880 MAP2K5Q13163 448 aa13.02□□□□□ -0.33
SIN3B-210ENST00000599880 SHCBP1Q8NEM2 672 aa13.02□□□□□ -0.33
SIN3B-210ENST00000599880 EXOC6Q8TAG9 804 aa13.02□□□□□ -0.33
SIN3B-210ENST00000599880 LNPKQ9C0E8 428 aa13.02□□□□□ -0.33
SIN3B-210ENST00000599880 CRISPLD2Q9H0B8 497 aa13.02□□□□□ -0.33
SIN3B-210ENST00000599880 NAPBQ9H115 298 aa13.02□□□□□ -0.33
SIN3B-210ENST00000599880 HMX1Q9NP08 348 aaPredicted RBP13.02□□□□□ -0.33
SIN3B-210ENST00000599880 HELLSQ9NRZ9 838 aa13.02□□□□□ -0.33
SIN3B-210ENST00000599880 SYNPO2Q9UMS6 1093 aa13.02□□□□□ -0.33
SIN3B-210ENST00000599880 IVNS1ABPQ9Y6Y0 642 aa13.02□□□□□ -0.33
SIN3B-210ENST00000599880 CEP290O15078 2479 aa13.02□□□□□ -0.33
SIN3B-210ENST00000599880 IGKV6D-41A0A0C4DH26 115 aa13.01□□□□□ -0.33
SIN3B-210ENST00000599880 STRNO43815 780 aa13.01□□□□□ -0.33
SIN3B-210ENST00000599880 FLOT1O75955 427 aa13.01□□□□□ -0.33
SIN3B-210ENST00000599880 SLC3A2P08195 630 aaKnown RBP13.01□□□□□ -0.33
SIN3B-210ENST00000599880 ZKSCAN1P17029 563 aaPredicted RBP13.01□□□□□ -0.33
SIN3B-210ENST00000599880 PTPREP23469 700 aa13.01□□□□□ -0.33
SIN3B-210ENST00000599880 NUCB1Q02818 461 aa13.01□□□□□ -0.33
SIN3B-210ENST00000599880 PPARAQ07869 468 aa13.01□□□□□ -0.33
SIN3B-210ENST00000599880 GRB14Q14449 540 aa13.01□□□□□ -0.33
SIN3B-210ENST00000599880 CHD1LQ86WJ1 897 aa13.01□□□□□ -0.33
SIN3B-210ENST00000599880 ZNF444Q8N0Y2 327 aaPredicted RBP13.01□□□□□ -0.33
SIN3B-210ENST00000599880 SPICE1Q8N0Z3 855 aa13.01□□□□□ -0.33
SIN3B-210ENST00000599880 ANKLE1Q8NAG6 615 aa13.01□□□□□ -0.33
SIN3B-210ENST00000599880 DEFB118Q96PH6 123 aa13.01□□□□□ -0.33
SIN3B-210ENST00000599880 SPATC1LQ9H0A9 340 aa13.01□□□□□ -0.33
SIN3B-210ENST00000599880 OSBPL3Q9H4L5 887 aa13.01□□□□□ -0.33
SIN3B-210ENST00000599880 ADAMTS5Q9UNA0 930 aa13.01□□□□□ -0.33
SIN3B-210ENST00000599880 ZMYM6O95789 1325 aa13□□□□□ -0.33
SIN3B-210ENST00000599880 FOXP2O15409 715 aa13□□□□□ -0.33
SIN3B-210ENST00000599880 FARP2O94887 1054 aaPredicted RBP13□□□□□ -0.33
SIN3B-210ENST00000599880 ATP2B2Q01814 1243 aa13□□□□□ -0.33
SIN3B-210ENST00000599880 HTATIP2Q9BUP3 242 aa13□□□□□ -0.33
SIN3B-210ENST00000599880 MOV10L1Q9BXT6 1211 aaKnown RBP13□□□□□ -0.33
SIN3B-210ENST00000599880 IGHDP01880 384 aa12.99□□□□□ -0.33
SIN3B-210ENST00000599880 PRKAR2AP13861 404 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms