RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 MOV10L1Q9BXT6 1211 aaKnown RBP15.03■□□□□ -0
HOMER3-211ENST00000599808 TTYH1Q9H313 450 aaPredicted RBP15.03■□□□□ -0
HOMER3-211ENST00000599808 CABP5Q9NP86 173 aa15.03■□□□□ -0
HOMER3-211ENST00000599808 PDLIM7Q9NR12 457 aa15.03■□□□□ -0
HOMER3-211ENST00000599808 TLR7Q9NYK1 1049 aaKnown RBP15.03■□□□□ -0
HOMER3-211ENST00000599808 IPO8O15397 1037 aaKnown RBP15.02■□□□□ -0
HOMER3-211ENST00000599808 SEPT4O43236 478 aa15.02■□□□□ -0
HOMER3-211ENST00000599808 STRNO43815 780 aa15.02■□□□□ -0
HOMER3-211ENST00000599808 COBLO75128 1261 aa15.02■□□□□ -0
HOMER3-211ENST00000599808 SURF6O75683 361 aaKnown RBP15.02■□□□□ -0
HOMER3-211ENST00000599808 SEPT2Q15019 361 aa15.02■□□□□ -0
HOMER3-211ENST00000599808 SH3RF1Q7Z6J0 888 aa15.02■□□□□ -0
HOMER3-211ENST00000599808 CERS3Q8IU89 383 aa15.02■□□□□ -0
HOMER3-211ENST00000599808 MYLIPQ8WY64 445 aa15.02■□□□□ -0
HOMER3-211ENST00000599808 FRAT1Q92837 279 aaPredicted RBP15.02■□□□□ -0
HOMER3-211ENST00000599808 CCDC8Q9H0W5 538 aaPredicted RBP15.02■□□□□ -0
HOMER3-211ENST00000599808 PLXNA1Q9UIW2 1896 aa15.01□□□□□ -0.01
HOMER3-211ENST00000599808 COL11A1P12107 1806 aaPredicted RBP15.01□□□□□ -0.01
HOMER3-211ENST00000599808 A0A1W2PRG0 241 aa15.01□□□□□ -0.01
HOMER3-211ENST00000599808 TRIM43BA6NCK2 446 aa15.01□□□□□ -0.01
HOMER3-211ENST00000599808 BCAR3O75815 825 aa15.01□□□□□ -0.01
HOMER3-211ENST00000599808 MYCNP04198 464 aaPredicted RBP15.01□□□□□ -0.01
HOMER3-211ENST00000599808 ADCYAP1R1P41586 468 aa15.01□□□□□ -0.01
HOMER3-211ENST00000599808 SMAD3P84022 425 aaKnown RBP15.01□□□□□ -0.01
HOMER3-211ENST00000599808 COG2Q14746 738 aa15.01□□□□□ -0.01
HOMER3-211ENST00000599808 PRAMEF19Q5SWL8 479 aa15.01□□□□□ -0.01
HOMER3-211ENST00000599808 FERMT2Q96AC1 680 aa15.01□□□□□ -0.01
HOMER3-211ENST00000599808 TRIM43Q96BQ3 446 aaPredicted RBP15.01□□□□□ -0.01
HOMER3-211ENST00000599808 SPATC1LQ9H0A9 340 aa15.01□□□□□ -0.01
HOMER3-211ENST00000599808 ANTXR1Q9H6X2 564 aa15.01□□□□□ -0.01
HOMER3-211ENST00000599808 MUC3AQ02505 3323 aa15□□□□□ -0.01
HOMER3-211ENST00000599808 ERCC3P19447 782 aa15□□□□□ -0.01
HOMER3-211ENST00000599808 ATP8B2P98198 1209 aa15□□□□□ -0.01
HOMER3-211ENST00000599808 EVX2Q03828 476 aa15□□□□□ -0.01
HOMER3-211ENST00000599808 GABPAQ06546 454 aa15□□□□□ -0.01
HOMER3-211ENST00000599808 LRRC41Q15345 812 aa15□□□□□ -0.01
HOMER3-211ENST00000599808 TMEM57Q8N5G2 664 aa15□□□□□ -0.01
HOMER3-211ENST00000599808 SHCBP1Q8NEM2 672 aa15□□□□□ -0.01
HOMER3-211ENST00000599808 EAF2Q96CJ1 260 aaPredicted RBP15□□□□□ -0.01
HOMER3-211ENST00000599808 TANGO6Q9C0B7 1094 aa15□□□□□ -0.01
HOMER3-211ENST00000599808 HOXC10Q9NYD6 342 aa15□□□□□ -0.01
HOMER3-211ENST00000599808 FAM47AQ5JRC9 791 aa14.99□□□□□ -0.01
HOMER3-211ENST00000599808 KIAA1755Q5JYT7 1200 aa14.99□□□□□ -0.01
HOMER3-211ENST00000599808 C1orf53Q5VUE5 145 aa14.99□□□□□ -0.01
HOMER3-211ENST00000599808 RIOK1Q9BRS2 568 aaKnown RBP14.99□□□□□ -0.01
HOMER3-211ENST00000599808 C1orf115Q9H7X2 142 aa14.99□□□□□ -0.01
HOMER3-211ENST00000599808 NOP58Q9Y2X3 529 aaKnown RBP14.99□□□□□ -0.01
HOMER3-211ENST00000599808 MYO9BQ13459 2157 aa14.99□□□□□ -0.01
HOMER3-211ENST00000599808 POLR3DP05423 398 aaPredicted RBP14.98□□□□□ -0.01
HOMER3-211ENST00000599808 FOSL2P15408 326 aa14.98□□□□□ -0.01
HOMER3-211ENST00000599808 ITGB8P26012 769 aa14.98□□□□□ -0.01
HOMER3-211ENST00000599808 TLE2Q04725 743 aa14.98□□□□□ -0.01
HOMER3-211ENST00000599808 MAP3K12Q12852 859 aa14.98□□□□□ -0.01
HOMER3-211ENST00000599808 MAML3Q96JK9 1138 aa14.98□□□□□ -0.01
HOMER3-211ENST00000599808 MROH8Q9H579 483 aa14.98□□□□□ -0.01
HOMER3-211ENST00000599808 PRDM6Q9NQX0 595 aa14.98□□□□□ -0.01
HOMER3-211ENST00000599808 SLC5A4Q9NY91 659 aa14.98□□□□□ -0.01
HOMER3-211ENST00000599808 MPHOSPH10O00566 681 aaKnown RBP14.97□□□□□ -0.01
HOMER3-211ENST00000599808 DSG3P32926 999 aa14.97□□□□□ -0.01
HOMER3-211ENST00000599808 EPHB4P54760 987 aa14.97□□□□□ -0.01
HOMER3-211ENST00000599808 PLS1Q14651 629 aa14.97□□□□□ -0.01
HOMER3-211ENST00000599808 NCAPG2Q86XI2 1143 aa14.97□□□□□ -0.01
HOMER3-211ENST00000599808 ABRAQ8N0Z2 381 aa14.97□□□□□ -0.01
HOMER3-211ENST00000599808 MB21D1Q8N884 522 aa14.97□□□□□ -0.01
HOMER3-211ENST00000599808 PHF24Q9UPV7 400 aa14.97□□□□□ -0.01
HOMER3-211ENST00000599808 BAZ2AQ9UIF9 1905 aaKnown RBP14.97□□□□□ -0.01
HOMER3-211ENST00000599808 TMED8Q6PL24 325 aaPredicted RBP14.96□□□□□ -0.01
HOMER3-211ENST00000599808 ATG4CQ96DT6 458 aa14.96□□□□□ -0.01
HOMER3-211ENST00000599808 RNPC3Q96LT9 517 aaKnown RBP14.96□□□□□ -0.01
HOMER3-211ENST00000599808 TACC3Q9Y6A5 838 aa14.96□□□□□ -0.01
HOMER3-211ENST00000599808 TMEM265A0A087WTH1 108 aa14.95□□□□□ -0.02
HOMER3-211ENST00000599808 MAGEB6P1A0A0J9YX57 407 aa14.95□□□□□ -0.02
HOMER3-211ENST00000599808 FLOT1O75955 427 aa14.95□□□□□ -0.02
HOMER3-211ENST00000599808 CLTBP09497 229 aa14.95□□□□□ -0.02
HOMER3-211ENST00000599808 CLEC10AQ8IUN9 316 aa14.95□□□□□ -0.02
HOMER3-211ENST00000599808 SLC44A5Q8NCS7 719 aa14.95□□□□□ -0.02
HOMER3-211ENST00000599808 XPNPEP3Q9NQH7 507 aa14.95□□□□□ -0.02
HOMER3-211ENST00000599808 MCM9Q9NXL9 1143 aa14.95□□□□□ -0.02
HOMER3-211ENST00000599808 KIAA0355O15063 1070 aa14.94□□□□□ -0.02
HOMER3-211ENST00000599808 PGK1P00558 417 aa14.94□□□□□ -0.02
HOMER3-211ENST00000599808 CYP2D6P10635 497 aa14.94□□□□□ -0.02
HOMER3-211ENST00000599808 RARBP10826 455 aa14.94□□□□□ -0.02
HOMER3-211ENST00000599808 FCER1AP12319 257 aa14.94□□□□□ -0.02
HOMER3-211ENST00000599808 TMEM132BQ14DG7 1078 aa14.94□□□□□ -0.02
HOMER3-211ENST00000599808 ZKSCAN2Q63HK3 967 aa14.94□□□□□ -0.02
HOMER3-211ENST00000599808 TMEM179Q6ZVK1 233 aa14.94□□□□□ -0.02
HOMER3-211ENST00000599808 SIAH1Q8IUQ4 282 aa14.94□□□□□ -0.02
HOMER3-211ENST00000599808 SPICE1Q8N0Z3 855 aa14.94□□□□□ -0.02
HOMER3-211ENST00000599808 SYMPKQ92797 1274 aaKnown RBP14.94□□□□□ -0.02
HOMER3-211ENST00000599808 CRNKL1Q9BZJ0 848 aaKnown RBP14.94□□□□□ -0.02
HOMER3-211ENST00000599808 NRBP1Q9UHY1 535 aa14.94□□□□□ -0.02
HOMER3-211ENST00000599808 A0A1W2PQ45 241 aaPredicted RBP14.93□□□□□ -0.02
HOMER3-211ENST00000599808 A0A1W2PQY0 241 aa14.93□□□□□ -0.02
HOMER3-211ENST00000599808 PQBP1O60828 265 aaKnown RBP14.93□□□□□ -0.02
HOMER3-211ENST00000599808 RAG1P15918 1043 aa14.93□□□□□ -0.02
HOMER3-211ENST00000599808 PDE6AP16499 860 aa14.93□□□□□ -0.02
HOMER3-211ENST00000599808 TAL1P17542 331 aaPredicted RBP14.93□□□□□ -0.02
HOMER3-211ENST00000599808 GRIN2CQ14957 1233 aa14.93□□□□□ -0.02
HOMER3-211ENST00000599808 SAMD1Q6SPF0 538 aaPredicted RBP14.93□□□□□ -0.02
HOMER3-211ENST00000599808 AACSQ86V21 672 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms