RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 SLAIN1Q8ND83 568 aa14.55□□□□□ -0.08
LIG1-217ENST00000599165 GPRC5AQ8NFJ5 357 aa14.55□□□□□ -0.08
LIG1-217ENST00000599165 PXYLP1Q8TE99 480 aa14.55□□□□□ -0.08
LIG1-217ENST00000599165 USP6NLQ92738 828 aa14.55□□□□□ -0.08
LIG1-217ENST00000599165 EVI5LQ96CN4 794 aa14.55□□□□□ -0.08
LIG1-217ENST00000599165 A0A0D9SFI3 127 aa14.54□□□□□ -0.08
LIG1-217ENST00000599165 CCL5P13501 91 aa14.54□□□□□ -0.08
LIG1-217ENST00000599165 COA7Q96BR5 231 aa14.54□□□□□ -0.08
LIG1-217ENST00000599165 DDRGK1Q96HY6 314 aa14.54□□□□□ -0.08
LIG1-217ENST00000599165 FAM227BQ96M60 508 aa14.54□□□□□ -0.08
LIG1-217ENST00000599165 PAGR1Q9BTK6 254 aa14.54□□□□□ -0.08
LIG1-217ENST00000599165 UNC93B1Q9H1C4 597 aa14.54□□□□□ -0.08
LIG1-217ENST00000599165 OSBPL3Q9H4L5 887 aa14.54□□□□□ -0.08
LIG1-217ENST00000599165 VCPKMTQ9H867 229 aa14.54□□□□□ -0.08
LIG1-217ENST00000599165 RABGAP1Q9Y3P9 1069 aa14.54□□□□□ -0.08
LIG1-217ENST00000599165 PRDM1O75626 825 aa14.53□□□□□ -0.08
LIG1-217ENST00000599165 INHAP05111 366 aa14.53□□□□□ -0.08
LIG1-217ENST00000599165 PDE4AP27815 886 aa14.53□□□□□ -0.08
LIG1-217ENST00000599165 TDO2P48775 406 aa14.53□□□□□ -0.08
LIG1-217ENST00000599165 TRIM32Q13049 653 aa14.53□□□□□ -0.08
LIG1-217ENST00000599165 LRRFIP1Q32MZ4 808 aaKnown RBP14.53□□□□□ -0.08
LIG1-217ENST00000599165 AMOTL1Q8IY63 956 aa14.53□□□□□ -0.08
LIG1-217ENST00000599165 SPICE1Q8N0Z3 855 aa14.53□□□□□ -0.08
LIG1-217ENST00000599165 GTF3C2Q8WUA4 911 aaPredicted RBP14.53□□□□□ -0.08
LIG1-217ENST00000599165 TMEM106CQ9BVX2 250 aa14.53□□□□□ -0.08
LIG1-217ENST00000599165 ZNF236Q9UL36 1845 aa14.52□□□□□ -0.08
LIG1-217ENST00000599165 PLIN4Q96Q06 1357 aa14.52□□□□□ -0.08
LIG1-217ENST00000599165 MORN1Q5T089 497 aa14.52□□□□□ -0.09
LIG1-217ENST00000599165 GPR142Q7Z601 462 aa14.52□□□□□ -0.09
LIG1-217ENST00000599165 UBE2Q1Q7Z7E8 422 aa14.52□□□□□ -0.09
LIG1-217ENST00000599165 ZNF589Q86UQ0 364 aaPredicted RBP14.52□□□□□ -0.09
LIG1-217ENST00000599165 TRIB2Q92519 343 aa14.52□□□□□ -0.09
LIG1-217ENST00000599165 LPAR1Q92633 364 aa14.52□□□□□ -0.09
LIG1-217ENST00000599165 KANSL2Q9H9L4 492 aa14.52□□□□□ -0.09
LIG1-217ENST00000599165 ARHGEF10LQ9HCE6 1279 aa14.52□□□□□ -0.09
LIG1-217ENST00000599165 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.52□□□□□ -0.09
LIG1-217ENST00000599165 CEP290O15078 2479 aa14.51□□□□□ -0.09
LIG1-217ENST00000599165 ZNFX1Q9P2E3 1918 aaKnown RBP14.51□□□□□ -0.09
LIG1-217ENST00000599165 APPP05067 770 aa14.51□□□□□ -0.09
LIG1-217ENST00000599165 GJB1P08034 283 aa14.51□□□□□ -0.09
LIG1-217ENST00000599165 PPARAQ07869 468 aa14.51□□□□□ -0.09
LIG1-217ENST00000599165 NMIQ13287 307 aaPredicted RBP14.51□□□□□ -0.09
LIG1-217ENST00000599165 COG2Q14746 738 aa14.51□□□□□ -0.09
LIG1-217ENST00000599165 INCENPQ9NQS7 918 aa14.51□□□□□ -0.09
LIG1-217ENST00000599165 PAK6Q9NQU5 681 aaPredicted RBP14.51□□□□□ -0.09
LIG1-217ENST00000599165 HELLSQ9NRZ9 838 aa14.51□□□□□ -0.09
LIG1-217ENST00000599165 FBXO28Q9NVF7 368 aa14.51□□□□□ -0.09
LIG1-217ENST00000599165 ZBTB47Q9UFB7 747 aaPredicted RBP14.51□□□□□ -0.09
LIG1-217ENST00000599165 LAMA4Q16363 1823 aa14.5□□□□□ -0.09
LIG1-217ENST00000599165 FRMPD3Q5JV73 1810 aa14.5□□□□□ -0.09
LIG1-217ENST00000599165 WDR46O15213 610 aaKnown RBP14.5□□□□□ -0.09
LIG1-217ENST00000599165 CYP2B6P20813 491 aa14.5□□□□□ -0.09
LIG1-217ENST00000599165 MAPK4P31152 587 aa14.5□□□□□ -0.09
LIG1-217ENST00000599165 DSG3P32926 999 aa14.5□□□□□ -0.09
LIG1-217ENST00000599165 GJA8P48165 433 aa14.5□□□□□ -0.09
LIG1-217ENST00000599165 CCL14Q16627 93 aa14.5□□□□□ -0.09
LIG1-217ENST00000599165 NKX2-3Q8TAU0 364 aa14.5□□□□□ -0.09
LIG1-217ENST00000599165 ATG4CQ96DT6 458 aa14.5□□□□□ -0.09
LIG1-217ENST00000599165 CEP95Q96GE4 821 aa14.5□□□□□ -0.09
LIG1-217ENST00000599165 TANGO6Q9C0B7 1094 aa14.5□□□□□ -0.09
LIG1-217ENST00000599165 RNF208Q9H0X6 261 aa14.5□□□□□ -0.09
LIG1-217ENST00000599165 NAPBQ9H115 298 aa14.5□□□□□ -0.09
LIG1-217ENST00000599165 NYAP2Q9P242 653 aa14.5□□□□□ -0.09
LIG1-217ENST00000599165 ADAMTS5Q9UNA0 930 aa14.5□□□□□ -0.09
LIG1-217ENST00000599165 ALPK3Q96L96 1907 aa14.5□□□□□ -0.09
LIG1-217ENST00000599165 IGHA2P01877 340 aa14.49□□□□□ -0.09
LIG1-217ENST00000599165 UBXN2AP68543 259 aa14.49□□□□□ -0.09
LIG1-217ENST00000599165 ATP2B2Q01814 1243 aa14.49□□□□□ -0.09
LIG1-217ENST00000599165 CTDSPL2Q05D32 466 aa14.49□□□□□ -0.09
LIG1-217ENST00000599165 MAP3K21Q5TCX8 1036 aa14.49□□□□□ -0.09
LIG1-217ENST00000599165 PLEKHH3Q7Z736 793 aa14.49□□□□□ -0.09
LIG1-217ENST00000599165 TICAM2Q86XR7 235 aa14.49□□□□□ -0.09
LIG1-217ENST00000599165 REPS2Q8NFH8 660 aa14.49□□□□□ -0.09
LIG1-217ENST00000599165 NUP88Q99567 741 aaPredicted RBP14.49□□□□□ -0.09
LIG1-217ENST00000599165 MOV10L1Q9BXT6 1211 aaKnown RBP14.49□□□□□ -0.09
LIG1-217ENST00000599165 NACAP1Q9BZK3 213 aa14.49□□□□□ -0.09
LIG1-217ENST00000599165 NBPF3Q9H094 633 aa14.49□□□□□ -0.09
LIG1-217ENST00000599165 SH2D4AQ9H788 454 aa14.49□□□□□ -0.09
LIG1-217ENST00000599165 MKNK2Q9HBH9 465 aa14.49□□□□□ -0.09
LIG1-217ENST00000599165 BIN2Q9UBW5 565 aaPredicted RBP14.49□□□□□ -0.09
LIG1-217ENST00000599165 FLOT1O75955 427 aa14.48□□□□□ -0.09
LIG1-217ENST00000599165 NDUFB10O96000 172 aa14.48□□□□□ -0.09
LIG1-217ENST00000599165 HMGCRP04035 888 aa14.48□□□□□ -0.09
LIG1-217ENST00000599165 FGRP09769 529 aa14.48□□□□□ -0.09
LIG1-217ENST00000599165 XRCC5P13010 732 aaKnown RBP14.48□□□□□ -0.09
LIG1-217ENST00000599165 SDSP20132 328 aa14.48□□□□□ -0.09
LIG1-217ENST00000599165 PTPREP23469 700 aa14.48□□□□□ -0.09
LIG1-217ENST00000599165 GRB14Q14449 540 aa14.48□□□□□ -0.09
LIG1-217ENST00000599165 ALX1Q15699 326 aa14.48□□□□□ -0.09
LIG1-217ENST00000599165 MCMDC2Q4G0Z9 681 aa14.48□□□□□ -0.09
LIG1-217ENST00000599165 FAM47AQ5JRC9 791 aa14.48□□□□□ -0.09
LIG1-217ENST00000599165 FAM83BQ5T0W9 1011 aa14.48□□□□□ -0.09
LIG1-217ENST00000599165 NEDD1Q8NHV4 660 aa14.48□□□□□ -0.09
LIG1-217ENST00000599165 U2AF1L4Q8WU68 220 aaKnown RBP14.48□□□□□ -0.09
LIG1-217ENST00000599165 SOCS4Q8WXH5 440 aa14.48□□□□□ -0.09
LIG1-217ENST00000599165 MKL1Q969V6 931 aa14.48□□□□□ -0.09
LIG1-217ENST00000599165 NUDT12Q9BQG2 462 aa14.48□□□□□ -0.09
LIG1-217ENST00000599165 CRISPLD2Q9H0B8 497 aa14.48□□□□□ -0.09
LIG1-217ENST00000599165 IL25Q9H293 177 aa14.48□□□□□ -0.09
LIG1-217ENST00000599165 MTMR4Q9NYA4 1195 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms