RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 TCP11L1Q9NUJ3 509 aa20.96■□□□□ 0.95
USHBP1-209ENST00000598570 ADAMTS5Q9UNA0 930 aa20.96■□□□□ 0.95
USHBP1-209ENST00000598570 LAMA4Q16363 1823 aa20.95■□□□□ 0.94
USHBP1-209ENST00000598570 SGSM2O43147 1006 aa20.95■□□□□ 0.94
USHBP1-209ENST00000598570 PRDM1O75626 825 aa20.95■□□□□ 0.94
USHBP1-209ENST00000598570 CTDSPL2Q05D32 466 aa20.95■□□□□ 0.94
USHBP1-209ENST00000598570 STAG1Q8WVM7 1258 aa20.95■□□□□ 0.94
USHBP1-209ENST00000598570 RUFY2Q8WXA3 655 aa20.95■□□□□ 0.94
USHBP1-209ENST00000598570 FEZ1Q99689 392 aa20.95■□□□□ 0.94
USHBP1-209ENST00000598570 ARHGAP39Q9C0H5 1083 aa20.95■□□□□ 0.94
USHBP1-209ENST00000598570 INCENPQ9NQS7 918 aa20.95■□□□□ 0.94
USHBP1-209ENST00000598570 IL17RBQ9NRM6 502 aa20.95■□□□□ 0.94
USHBP1-209ENST00000598570 PARP14Q460N5 1801 aa20.94■□□□□ 0.94
USHBP1-209ENST00000598570 DOCK3Q8IZD9 2030 aa20.94■□□□□ 0.94
USHBP1-209ENST00000598570 NEFLP07196 543 aa20.94■□□□□ 0.94
USHBP1-209ENST00000598570 TFAP4Q01664 338 aa20.94■□□□□ 0.94
USHBP1-209ENST00000598570 SMCR8Q8TEV9 937 aaPredicted RBP20.94■□□□□ 0.94
USHBP1-209ENST00000598570 CEP95Q96GE4 821 aa20.94■□□□□ 0.94
USHBP1-209ENST00000598570 TXNRD2Q9NNW7 524 aa20.94■□□□□ 0.94
USHBP1-209ENST00000598570 TRIM17Q9Y577 477 aa20.94■□□□□ 0.94
USHBP1-209ENST00000598570 MYPNQ86TC9 1320 aa20.94■□□□□ 0.94
USHBP1-209ENST00000598570 ZSWIM8A7E2V4 1837 aa20.94■□□□□ 0.94
USHBP1-209ENST00000598570 WDR46O15213 610 aaKnown RBP20.93■□□□□ 0.94
USHBP1-209ENST00000598570 PSMC4P43686 418 aa20.93■□□□□ 0.94
USHBP1-209ENST00000598570 IRX3P78415 501 aaPredicted RBP20.93■□□□□ 0.94
USHBP1-209ENST00000598570 COG2Q14746 738 aa20.93■□□□□ 0.94
USHBP1-209ENST00000598570 KIF22Q14807 665 aa20.93■□□□□ 0.94
USHBP1-209ENST00000598570 AKNAD1Q5T1N1 836 aa20.93■□□□□ 0.94
USHBP1-209ENST00000598570 RPAP3Q9H6T3 665 aaPredicted RBP20.93■□□□□ 0.94
USHBP1-209ENST00000598570 PPP4R2Q9NY27 417 aa20.93■□□□□ 0.94
USHBP1-209ENST00000598570 HOXC10Q9NYD6 342 aa20.93■□□□□ 0.94
USHBP1-209ENST00000598570 CTNNA3Q9UI47 895 aa20.93■□□□□ 0.94
USHBP1-209ENST00000598570 RABGAP1Q9Y3P9 1069 aa20.93■□□□□ 0.94
USHBP1-209ENST00000598570 CNMDO75829 334 aa20.92■□□□□ 0.94
USHBP1-209ENST00000598570 TTLL1O95922 423 aa20.92■□□□□ 0.94
USHBP1-209ENST00000598570 PPP4R3BQ5MIZ7 849 aa20.92■□□□□ 0.94
USHBP1-209ENST00000598570 ANKRD13CQ8N6S4 541 aa20.92■□□□□ 0.94
USHBP1-209ENST00000598570 GMCL1P1Q8NEA9 526 aa20.92■□□□□ 0.94
USHBP1-209ENST00000598570 SRRDQ9UH36 339 aa20.92■□□□□ 0.94
USHBP1-209ENST00000598570 HPS5Q9UPZ3 1129 aa20.92■□□□□ 0.94
USHBP1-209ENST00000598570 MYH4Q9Y623 1939 aa20.92■□□□□ 0.94
USHBP1-209ENST00000598570 A0A0G2JMZ2 1700 aa20.91■□□□□ 0.94
USHBP1-209ENST00000598570 ZYXQ15942 572 aaKnown RBP20.91■□□□□ 0.94
USHBP1-209ENST00000598570 Q3C1V9 767 aa20.91■□□□□ 0.94
USHBP1-209ENST00000598570 SKAP1Q86WV1 359 aa20.91■□□□□ 0.94
USHBP1-209ENST00000598570 TBC1D10CQ8IV04 446 aa20.91■□□□□ 0.94
USHBP1-209ENST00000598570 GPRC5AQ8NFJ5 357 aa20.91■□□□□ 0.94
USHBP1-209ENST00000598570 MAP4K1Q92918 833 aa20.91■□□□□ 0.94
USHBP1-209ENST00000598570 ARMC5Q96C12 935 aa20.91■□□□□ 0.94
USHBP1-209ENST00000598570 SPDYE16A6NNV3 312 aaPredicted RBP20.9■□□□□ 0.94
USHBP1-209ENST00000598570 F5H6K3 240 aa20.9■□□□□ 0.94
USHBP1-209ENST00000598570 ZNF213O14771 459 aa20.9■□□□□ 0.94
USHBP1-209ENST00000598570 TSPY3P0CV98 308 aa20.9■□□□□ 0.94
USHBP1-209ENST00000598570 TSPY8P0CW00 308 aa20.9■□□□□ 0.94
USHBP1-209ENST00000598570 FCGRTP55899 365 aa20.9■□□□□ 0.94
USHBP1-209ENST00000598570 KLRC3Q07444 240 aa20.9■□□□□ 0.94
USHBP1-209ENST00000598570 FAM47AQ5JRC9 791 aa20.9■□□□□ 0.94
USHBP1-209ENST00000598570 STK11IPQ8N1F8 1099 aa20.9■□□□□ 0.94
USHBP1-209ENST00000598570 NKX2-3Q8TAU0 364 aa20.9■□□□□ 0.94
USHBP1-209ENST00000598570 RNF41Q9H4P4 317 aaPredicted RBP20.9■□□□□ 0.94
USHBP1-209ENST00000598570 GOPCQ9HD26 462 aa20.9■□□□□ 0.94
USHBP1-209ENST00000598570 CLIP2Q9UDT6 1046 aa20.9■□□□□ 0.94
USHBP1-209ENST00000598570 GJD2Q9UKL4 321 aa20.9■□□□□ 0.94
USHBP1-209ENST00000598570 HOXD10P28358 340 aa20.89■□□□□ 0.93
USHBP1-209ENST00000598570 DSG3P32926 999 aa20.89■□□□□ 0.93
USHBP1-209ENST00000598570 PTH1RQ03431 593 aa20.89■□□□□ 0.93
USHBP1-209ENST00000598570 IRF5Q13568 498 aa20.89■□□□□ 0.93
USHBP1-209ENST00000598570 MFSD6Q6ZSS7 791 aa20.89■□□□□ 0.93
USHBP1-209ENST00000598570 ANKS1AQ92625 1134 aa20.89■□□□□ 0.93
USHBP1-209ENST00000598570 TTC14Q96N46 770 aa20.89■□□□□ 0.93
USHBP1-209ENST00000598570 NDUFB10O96000 172 aa20.88■□□□□ 0.93
USHBP1-209ENST00000598570 ERVK-9P63128 1117 aa20.88■□□□□ 0.93
USHBP1-209ENST00000598570 ERVK-24P63145 666 aa20.88■□□□□ 0.93
USHBP1-209ENST00000598570 RCSD1Q6JBY9 416 aa20.88■□□□□ 0.93
USHBP1-209ENST00000598570 MB21D1Q8N884 522 aa20.88■□□□□ 0.93
USHBP1-209ENST00000598570 GMCL1Q96IK5 515 aa20.88■□□□□ 0.93
USHBP1-209ENST00000598570 BTBD7Q9P203 1132 aa20.88■□□□□ 0.93
USHBP1-209ENST00000598570 PLXNB2O15031 1838 aa20.88■□□□□ 0.93
USHBP1-209ENST00000598570 PLA2G6O60733 806 aa20.87■□□□□ 0.93
USHBP1-209ENST00000598570 HAND2P61296 217 aa20.87■□□□□ 0.93
USHBP1-209ENST00000598570 USP6NLQ92738 828 aa20.87■□□□□ 0.93
USHBP1-209ENST00000598570 ESYT1Q9BSJ8 1104 aa20.87■□□□□ 0.93
USHBP1-209ENST00000598570 TSPY2A6NKD2 308 aa20.86■□□□□ 0.93
USHBP1-209ENST00000598570 FMNL1O95466 1100 aaPredicted RBP20.86■□□□□ 0.93
USHBP1-209ENST00000598570 IMMTQ16891 758 aaKnown RBP20.86■□□□□ 0.93
USHBP1-209ENST00000598570 SPICE1Q8N0Z3 855 aa20.86■□□□□ 0.93
USHBP1-209ENST00000598570 REPS2Q8NFH8 660 aa20.86■□□□□ 0.93
USHBP1-209ENST00000598570 LSG1Q9H089 658 aaKnown RBP20.86■□□□□ 0.93
USHBP1-209ENST00000598570 PTCH2Q9Y6C5 1203 aa20.86■□□□□ 0.93
USHBP1-209ENST00000598570 U3KPZ7 1027 aaPredicted RBP20.86■□□□□ 0.93
USHBP1-209ENST00000598570 CENPFP49454 3210 aa20.85■□□□□ 0.93
USHBP1-209ENST00000598570 RANBP6O60518 1105 aaKnown RBP20.85■□□□□ 0.93
USHBP1-209ENST00000598570 NMT2O60551 498 aa20.85■□□□□ 0.93
USHBP1-209ENST00000598570 MAPK4P31152 587 aa20.85■□□□□ 0.93
USHBP1-209ENST00000598570 RGS19P49795 217 aa20.85■□□□□ 0.93
USHBP1-209ENST00000598570 PPP1R9AQ9ULJ8 1098 aa20.85■□□□□ 0.93
USHBP1-209ENST00000598570 NEDD4P46934 1319 aa20.84■□□□□ 0.93
USHBP1-209ENST00000598570 ATP2A1O14983 1001 aa20.84■□□□□ 0.93
USHBP1-209ENST00000598570 PEX10O60683 326 aa20.84■□□□□ 0.93
USHBP1-209ENST00000598570 CYP21A2P08686 494 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms