RNA–Protein interactions for RNA: ENST00000598478.1

LINC00343-206, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-206ENST00000598478 TRMT112Q9UI30 125 aaKnown RBP9.96□□□□□ -0.82
LINC00343-206ENST00000598478 NOD1Q9Y239 953 aa9.96□□□□□ -0.82
LINC00343-206ENST00000598478 BACH1O14867 736 aa9.95□□□□□ -0.82
LINC00343-206ENST00000598478 PCBP4P57723 403 aaKnown RBP9.95□□□□□ -0.82
LINC00343-206ENST00000598478 GTF2IP78347 998 aa9.95□□□□□ -0.82
LINC00343-206ENST00000598478 TAF7Q15545 349 aaPredicted RBP9.95□□□□□ -0.82
LINC00343-206ENST00000598478 ZNF468Q5VIY5 522 aaPredicted RBP9.95□□□□□ -0.82
LINC00343-206ENST00000598478 NLRP10Q86W26 655 aa9.95□□□□□ -0.82
LINC00343-206ENST00000598478 PRR12Q9ULL5 1215 aa9.95□□□□□ -0.82
LINC00343-206ENST00000598478 COG6Q9Y2V7 657 aa9.95□□□□□ -0.82
LINC00343-206ENST00000598478 WNT10BO00744 389 aa9.94□□□□□ -0.82
LINC00343-206ENST00000598478 ZBTB7BO15156 539 aaPredicted RBP9.94□□□□□ -0.82
LINC00343-206ENST00000598478 SASH1O94885 1247 aa9.94□□□□□ -0.82
LINC00343-206ENST00000598478 ANXA1P04083 346 aa9.94□□□□□ -0.82
LINC00343-206ENST00000598478 TXLNAP40222 546 aa9.94□□□□□ -0.82
LINC00343-206ENST00000598478 CNGB1Q14028 1251 aaPredicted RBP9.94□□□□□ -0.82
LINC00343-206ENST00000598478 CC2D1BQ5T0F9 858 aaKnown RBP9.94□□□□□ -0.82
LINC00343-206ENST00000598478 ZNF358Q9NW07 568 aa9.94□□□□□ -0.82
LINC00343-206ENST00000598478 MARK1Q9P0L2 795 aa9.94□□□□□ -0.82
LINC00343-206ENST00000598478 SCHIP1Q9P0W5 487 aaPredicted RBP9.94□□□□□ -0.82
LINC00343-206ENST00000598478 STAP2Q9UGK3 403 aa9.94□□□□□ -0.82
LINC00343-206ENST00000598478 STXBP5LQ9Y2K9 1186 aa9.94□□□□□ -0.82
LINC00343-206ENST00000598478 SH3TC1Q8TE82 1336 aa9.93□□□□□ -0.82
LINC00343-206ENST00000598478 A0A1W2PPC1 479 aa9.93□□□□□ -0.82
LINC00343-206ENST00000598478 EFSO43281 561 aa9.93□□□□□ -0.82
LINC00343-206ENST00000598478 UFL1O94874 794 aa9.93□□□□□ -0.82
LINC00343-206ENST00000598478 ZBTB48P10074 688 aaPredicted RBP9.93□□□□□ -0.82
LINC00343-206ENST00000598478 CHRNA4P43681 627 aa9.93□□□□□ -0.82
LINC00343-206ENST00000598478 EIF4A1P60842 406 aaKnown RBP9.93□□□□□ -0.82
LINC00343-206ENST00000598478 PROSER3Q2NL68 480 aa9.93□□□□□ -0.82
LINC00343-206ENST00000598478 LRP10Q7Z4F1 713 aa9.93□□□□□ -0.82
LINC00343-206ENST00000598478 UBE2Q1Q7Z7E8 422 aa9.93□□□□□ -0.82
LINC00343-206ENST00000598478 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.93□□□□□ -0.82
LINC00343-206ENST00000598478 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.93□□□□□ -0.82
LINC00343-206ENST00000598478 ZDHHC1Q8WTX9 485 aa9.93□□□□□ -0.82
LINC00343-206ENST00000598478 ARHGAP39Q9C0H5 1083 aa9.93□□□□□ -0.82
LINC00343-206ENST00000598478 PRDM6Q9NQX0 595 aa9.93□□□□□ -0.82
LINC00343-206ENST00000598478 NR2E3Q9Y5X4 410 aa9.93□□□□□ -0.82
LINC00343-206ENST00000598478 TTC28Q96AY4 2481 aa9.93□□□□□ -0.82
LINC00343-206ENST00000598478 ZNF646O15015 1829 aaPredicted RBP9.92□□□□□ -0.82
LINC00343-206ENST00000598478 USP17L3A6NCW0 530 aa9.92□□□□□ -0.82
LINC00343-206ENST00000598478 USP17L4A6NCW7 530 aa9.92□□□□□ -0.82
LINC00343-206ENST00000598478 LZTS3O60299 673 aaPredicted RBP9.92□□□□□ -0.82
LINC00343-206ENST00000598478 LAMC2Q13753 1193 aa9.92□□□□□ -0.82
LINC00343-206ENST00000598478 OTUD7BQ6GQQ9 843 aa9.92□□□□□ -0.82
LINC00343-206ENST00000598478 USP17L1Q7RTZ2 530 aa9.92□□□□□ -0.82
LINC00343-206ENST00000598478 HTATIP2Q9BUP3 242 aa9.92□□□□□ -0.82
LINC00343-206ENST00000598478 ALG2Q9H553 416 aa9.92□□□□□ -0.82
LINC00343-206ENST00000598478 ANKIB1Q9P2G1 1089 aa9.92□□□□□ -0.82
LINC00343-206ENST00000598478 SSC5DA1L4H1 1573 aa9.92□□□□□ -0.82
LINC00343-206ENST00000598478 HSPA5P11021 654 aaKnown RBP9.91□□□□□ -0.82
LINC00343-206ENST00000598478 AIMP1Q12904 312 aaKnown RBP9.91□□□□□ -0.82
LINC00343-206ENST00000598478 NCOA4Q13772 614 aa9.91□□□□□ -0.82
LINC00343-206ENST00000598478 TEAD4Q15561 434 aa9.91□□□□□ -0.82
LINC00343-206ENST00000598478 FAM89AQ96GI7 184 aa9.91□□□□□ -0.82
LINC00343-206ENST00000598478 MTMR10Q9NXD2 777 aa9.91□□□□□ -0.82
LINC00343-206ENST00000598478 PODXL2Q9NZ53 605 aa9.91□□□□□ -0.82
LINC00343-206ENST00000598478 CDH23Q9H251 3354 aa9.91□□□□□ -0.82
LINC00343-206ENST00000598478 EIF2S2P20042 333 aaKnown RBP9.9□□□□□ -0.82
LINC00343-206ENST00000598478 RPS8P62241 208 aaKnown RBP9.9□□□□□ -0.82
LINC00343-206ENST00000598478 SF3B3Q15393 1217 aaKnown RBP9.9□□□□□ -0.82
LINC00343-206ENST00000598478 TRIM11Q96F44 468 aa9.9□□□□□ -0.82
LINC00343-206ENST00000598478 RAPGEFL1Q9UHV5 662 aa9.9□□□□□ -0.82
LINC00343-206ENST00000598478 NOS2P35228 1153 aa9.89□□□□□ -0.83
LINC00343-206ENST00000598478 EPHA4P54764 986 aa9.89□□□□□ -0.83
LINC00343-206ENST00000598478 ARHGEF6Q15052 776 aa9.89□□□□□ -0.83
LINC00343-206ENST00000598478 TAF1CQ15572 869 aaPredicted RBP9.89□□□□□ -0.83
LINC00343-206ENST00000598478 MAP3K11Q16584 847 aa9.89□□□□□ -0.83
LINC00343-206ENST00000598478 DACT2Q5SW24 774 aa9.89□□□□□ -0.83
LINC00343-206ENST00000598478 LRRC69Q6ZNQ3 347 aa9.89□□□□□ -0.83
LINC00343-206ENST00000598478 COPS6Q7L5N1 327 aa9.89□□□□□ -0.83
LINC00343-206ENST00000598478 APOBEC3FQ8IUX4 373 aaKnown RBP9.89□□□□□ -0.83
LINC00343-206ENST00000598478 OGFOD1Q8N543 542 aa9.89□□□□□ -0.83
LINC00343-206ENST00000598478 DEFB129Q9H1M3 183 aa9.89□□□□□ -0.83
LINC00343-206ENST00000598478 SEC31BQ9NQW1 1179 aa9.89□□□□□ -0.83
LINC00343-206ENST00000598478 DNAH12Q6ZR08 3092 aa9.89□□□□□ -0.83
LINC00343-206ENST00000598478 DLG5Q8TDM6 1919 aa9.88□□□□□ -0.83
LINC00343-206ENST00000598478 ALPK3Q96L96 1907 aa9.88□□□□□ -0.83
LINC00343-206ENST00000598478 USP17L5A8MUK1 530 aa9.88□□□□□ -0.83
LINC00343-206ENST00000598478 HTATSF1O43719 755 aaKnown RBP9.88□□□□□ -0.83
LINC00343-206ENST00000598478 GJA8P48165 433 aa9.88□□□□□ -0.83
LINC00343-206ENST00000598478 HSP90AB3PQ58FF7 597 aa9.88□□□□□ -0.83
LINC00343-206ENST00000598478 SLC9A9Q8IVB4 645 aa9.88□□□□□ -0.83
LINC00343-206ENST00000598478 DEPDC4Q8N2C3 294 aa9.88□□□□□ -0.83
LINC00343-206ENST00000598478 XAGE3Q8WTP9 111 aa9.88□□□□□ -0.83
LINC00343-206ENST00000598478 BRI3BPQ8WY22 251 aa9.88□□□□□ -0.83
LINC00343-206ENST00000598478 PLVAPQ9BX97 442 aa9.88□□□□□ -0.83
LINC00343-206ENST00000598478 ZNF232Q9UNY5 417 aa9.88□□□□□ -0.83
LINC00343-206ENST00000598478 OTOFQ9HC10 1997 aa9.88□□□□□ -0.83
LINC00343-206ENST00000598478 ELOA3CA0A087WX78 387 aaPredicted RBP9.87□□□□□ -0.83
LINC00343-206ENST00000598478 ELOA3DA6NLF2 546 aaPredicted RBP9.87□□□□□ -0.83
LINC00343-206ENST00000598478 EML1O00423 815 aa9.87□□□□□ -0.83
LINC00343-206ENST00000598478 PPP1R12BO60237 982 aaPredicted RBP9.87□□□□□ -0.83
LINC00343-206ENST00000598478 FARP2O94887 1054 aaPredicted RBP9.87□□□□□ -0.83
LINC00343-206ENST00000598478 CCL5P13501 91 aa9.87□□□□□ -0.83
LINC00343-206ENST00000598478 LACTBP83111 547 aaPredicted RBP9.87□□□□□ -0.83
LINC00343-206ENST00000598478 ELOA3BQ3SY89 546 aa9.87□□□□□ -0.83
LINC00343-206ENST00000598478 TBCELQ5QJ74 424 aa9.87□□□□□ -0.83
LINC00343-206ENST00000598478 SYT9Q86SS6 491 aa9.87□□□□□ -0.83
LINC00343-206ENST00000598478 WWC1Q8IX03 1113 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms