RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 PLIN4Q96Q06 1357 aa19.85■□□□□ 0.77
USHBP1-208ENST00000598309 POTEFA5A3E0 1075 aa19.85■□□□□ 0.77
USHBP1-208ENST00000598309 SPDYE16A6NNV3 312 aaPredicted RBP19.85■□□□□ 0.77
USHBP1-208ENST00000598309 WDR46O15213 610 aaKnown RBP19.85■□□□□ 0.77
USHBP1-208ENST00000598309 MAPK4P31152 587 aa19.85■□□□□ 0.77
USHBP1-208ENST00000598309 RILPL2Q969X0 211 aa19.85■□□□□ 0.77
USHBP1-208ENST00000598309 FAM227BQ96M60 508 aa19.85■□□□□ 0.77
USHBP1-208ENST00000598309 PAGR1Q9BTK6 254 aa19.85■□□□□ 0.77
USHBP1-208ENST00000598309 TANGO6Q9C0B7 1094 aa19.85■□□□□ 0.77
USHBP1-208ENST00000598309 ADCY3O60266 1144 aa19.84■□□□□ 0.77
USHBP1-208ENST00000598309 CNMDO75829 334 aa19.84■□□□□ 0.77
USHBP1-208ENST00000598309 UBXN2AP68543 259 aa19.84■□□□□ 0.77
USHBP1-208ENST00000598309 CCNA1P78396 465 aa19.84■□□□□ 0.77
USHBP1-208ENST00000598309 NMIQ13287 307 aaPredicted RBP19.84■□□□□ 0.77
USHBP1-208ENST00000598309 COG2Q14746 738 aa19.84■□□□□ 0.77
USHBP1-208ENST00000598309 ALX1Q15699 326 aa19.84■□□□□ 0.77
USHBP1-208ENST00000598309 KIAA1755Q5JYT7 1200 aa19.84■□□□□ 0.77
USHBP1-208ENST00000598309 ZNF444Q8N0Y2 327 aaPredicted RBP19.84■□□□□ 0.77
USHBP1-208ENST00000598309 STK11IPQ8N1F8 1099 aa19.84■□□□□ 0.77
USHBP1-208ENST00000598309 SOCS4Q8WXH5 440 aa19.84■□□□□ 0.77
USHBP1-208ENST00000598309 GOPCQ9HD26 462 aa19.84■□□□□ 0.77
USHBP1-208ENST00000598309 HOXC10Q9NYD6 342 aa19.84■□□□□ 0.77
USHBP1-208ENST00000598309 NYAP2Q9P242 653 aa19.84■□□□□ 0.77
USHBP1-208ENST00000598309 KIAA0100Q14667 2235 aaKnown RBP19.83■□□□□ 0.77
USHBP1-208ENST00000598309 ZMYM6O95789 1325 aa19.83■□□□□ 0.77
USHBP1-208ENST00000598309 IGKV6D-41A0A0C4DH26 115 aa19.83■□□□□ 0.77
USHBP1-208ENST00000598309 PEX10O60683 326 aa19.83■□□□□ 0.77
USHBP1-208ENST00000598309 SDSP20132 328 aa19.83■□□□□ 0.77
USHBP1-208ENST00000598309 ATP2B2Q01814 1243 aa19.83■□□□□ 0.77
USHBP1-208ENST00000598309 VPS53Q5VIR6 699 aa19.83■□□□□ 0.77
USHBP1-208ENST00000598309 GJD2Q9UKL4 321 aa19.83■□□□□ 0.77
USHBP1-208ENST00000598309 SYNPO2Q9UMS6 1093 aa19.83■□□□□ 0.77
USHBP1-208ENST00000598309 CCDC171Q6TFL3 1326 aa19.82■□□□□ 0.76
USHBP1-208ENST00000598309 HIP1O00291 1037 aa19.82■□□□□ 0.76
USHBP1-208ENST00000598309 PRDM1O75626 825 aa19.82■□□□□ 0.76
USHBP1-208ENST00000598309 MFAP1P55081 439 aaKnown RBP19.82■□□□□ 0.76
USHBP1-208ENST00000598309 Q3C1V9 767 aa19.82■□□□□ 0.76
USHBP1-208ENST00000598309 CCAR1Q8IX12 1150 aaKnown RBP19.82■□□□□ 0.76
USHBP1-208ENST00000598309 SPICE1Q8N0Z3 855 aa19.82■□□□□ 0.76
USHBP1-208ENST00000598309 MB21D1Q8N884 522 aa19.82■□□□□ 0.76
USHBP1-208ENST00000598309 PORCNQ9H237 461 aa19.82■□□□□ 0.76
USHBP1-208ENST00000598309 ANAPC4Q9UJX5 808 aa19.82■□□□□ 0.76
USHBP1-208ENST00000598309 PDE4AP27815 886 aa19.81■□□□□ 0.76
USHBP1-208ENST00000598309 ZNF589Q86UQ0 364 aaPredicted RBP19.81■□□□□ 0.76
USHBP1-208ENST00000598309 NEDD1Q8NHV4 660 aa19.81■□□□□ 0.76
USHBP1-208ENST00000598309 NUDT12Q9BQG2 462 aa19.81■□□□□ 0.76
USHBP1-208ENST00000598309 BTBD7Q9P203 1132 aa19.81■□□□□ 0.76
USHBP1-208ENST00000598309 BIN2Q9UBW5 565 aaPredicted RBP19.81■□□□□ 0.76
USHBP1-208ENST00000598309 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.81■□□□□ 0.76
USHBP1-208ENST00000598309 A0A0G2JMZ2 1700 aa19.81■□□□□ 0.76
USHBP1-208ENST00000598309 FLOT1O75955 427 aa19.8■□□□□ 0.76
USHBP1-208ENST00000598309 INHAP05111 366 aa19.8■□□□□ 0.76
USHBP1-208ENST00000598309 TSPY3P0CV98 308 aa19.8■□□□□ 0.76
USHBP1-208ENST00000598309 TSPY8P0CW00 308 aa19.8■□□□□ 0.76
USHBP1-208ENST00000598309 HSPD1P10809 573 aaKnown RBP19.8■□□□□ 0.76
USHBP1-208ENST00000598309 ELNP15502 786 aa19.8■□□□□ 0.76
USHBP1-208ENST00000598309 DSG3P32926 999 aa19.8■□□□□ 0.76
USHBP1-208ENST00000598309 MTFR1Q15390 333 aa19.8■□□□□ 0.76
USHBP1-208ENST00000598309 GPR142Q7Z601 462 aa19.8■□□□□ 0.76
USHBP1-208ENST00000598309 PLEKHH3Q7Z736 793 aa19.8■□□□□ 0.76
USHBP1-208ENST00000598309 DIAPH3Q9NSV4 1193 aa19.8■□□□□ 0.76
USHBP1-208ENST00000598309 MTMR4Q9NYA4 1195 aa19.8■□□□□ 0.76
USHBP1-208ENST00000598309 CENPFP49454 3210 aa19.8■□□□□ 0.76
USHBP1-208ENST00000598309 DOCK3Q8IZD9 2030 aa19.8■□□□□ 0.76
USHBP1-208ENST00000598309 RLFQ13129 1914 aa19.79■□□□□ 0.76
USHBP1-208ENST00000598309 TTLL1O95922 423 aa19.79■□□□□ 0.76
USHBP1-208ENST00000598309 MYCP01106 439 aaPredicted RBP19.79■□□□□ 0.76
USHBP1-208ENST00000598309 XRCC5P13010 732 aaKnown RBP19.79■□□□□ 0.76
USHBP1-208ENST00000598309 CCL5P13501 91 aa19.79■□□□□ 0.76
USHBP1-208ENST00000598309 EN2P19622 333 aaPredicted RBP19.79■□□□□ 0.76
USHBP1-208ENST00000598309 PPP4R3BQ5MIZ7 849 aa19.79■□□□□ 0.76
USHBP1-208ENST00000598309 MKL1Q969V6 931 aa19.79■□□□□ 0.76
USHBP1-208ENST00000598309 CEP95Q96GE4 821 aa19.79■□□□□ 0.76
USHBP1-208ENST00000598309 FGAP02671 866 aa19.78■□□□□ 0.76
USHBP1-208ENST00000598309 HMGCRP04035 888 aa19.78■□□□□ 0.76
USHBP1-208ENST00000598309 GJB1P08034 283 aa19.78■□□□□ 0.76
USHBP1-208ENST00000598309 FGRP09769 529 aa19.78■□□□□ 0.76
USHBP1-208ENST00000598309 MORN1Q5T089 497 aa19.78■□□□□ 0.76
USHBP1-208ENST00000598309 TTC22Q5TAA0 569 aa19.78■□□□□ 0.76
USHBP1-208ENST00000598309 TRMT44Q8IYL2 757 aaKnown RBP19.78■□□□□ 0.76
USHBP1-208ENST00000598309 SHCBP1Q8NEM2 672 aa19.78■□□□□ 0.76
USHBP1-208ENST00000598309 NKX2-3Q8TAU0 364 aa19.78■□□□□ 0.76
USHBP1-208ENST00000598309 USP6NLQ92738 828 aa19.78■□□□□ 0.76
USHBP1-208ENST00000598309 CWC22Q9HCG8 908 aaKnown RBP19.78■□□□□ 0.76
USHBP1-208ENST00000598309 ADAMTS5Q9UNA0 930 aa19.78■□□□□ 0.76
USHBP1-208ENST00000598309 PLXNB2O15031 1838 aa19.77■□□□□ 0.76
USHBP1-208ENST00000598309 F5H6K3 240 aa19.77■□□□□ 0.76
USHBP1-208ENST00000598309 ORC4O43929 436 aa19.77■□□□□ 0.76
USHBP1-208ENST00000598309 NDUFB10O96000 172 aa19.77■□□□□ 0.76
USHBP1-208ENST00000598309 RGS2P41220 211 aa19.77■□□□□ 0.76
USHBP1-208ENST00000598309 TFAP4Q01664 338 aa19.77■□□□□ 0.76
USHBP1-208ENST00000598309 CTDSPL2Q05D32 466 aa19.77■□□□□ 0.76
USHBP1-208ENST00000598309 KLRC3Q07444 240 aa19.77■□□□□ 0.76
USHBP1-208ENST00000598309 ATG4CQ96DT6 458 aa19.77■□□□□ 0.76
USHBP1-208ENST00000598309 APBA2Q99767 749 aa19.77■□□□□ 0.76
USHBP1-208ENST00000598309 SPATC1LQ9H0A9 340 aa19.77■□□□□ 0.76
USHBP1-208ENST00000598309 RNF208Q9H0X6 261 aa19.77■□□□□ 0.76
USHBP1-208ENST00000598309 CLIP2Q9UDT6 1046 aa19.77■□□□□ 0.76
USHBP1-208ENST00000598309 PPP1R9AQ9ULJ8 1098 aa19.77■□□□□ 0.76
USHBP1-208ENST00000598309 SLC15A5A6NIM6 579 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms