RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 SCG2P13521 617 aa22.34■■□□□ 1.17
GRAMD1A-207ENST00000598118 PIP4K2BP78356 416 aa22.34■■□□□ 1.17
GRAMD1A-207ENST00000598118 ATP2C1P98194 919 aaPredicted RBP22.34■■□□□ 1.17
GRAMD1A-207ENST00000598118 TRIM65Q6PJ69 517 aa22.34■■□□□ 1.17
GRAMD1A-207ENST00000598118 TPTE2Q6XPS3 522 aa22.34■■□□□ 1.17
GRAMD1A-207ENST00000598118 ERO1AQ96HE7 468 aa22.34■■□□□ 1.17
GRAMD1A-207ENST00000598118 ZMYND15Q9H091 742 aa22.34■■□□□ 1.17
GRAMD1A-207ENST00000598118 MCM9Q9NXL9 1143 aa22.34■■□□□ 1.17
GRAMD1A-207ENST00000598118 TSPY2A6NKD2 308 aa22.34■■□□□ 1.17
GRAMD1A-207ENST00000598118 FANCGO15287 622 aa22.34■■□□□ 1.17
GRAMD1A-207ENST00000598118 CCDC93Q567U6 631 aa22.34■■□□□ 1.17
GRAMD1A-207ENST00000598118 PIK3AP1Q6ZUJ8 805 aa22.34■■□□□ 1.17
GRAMD1A-207ENST00000598118 TC2NQ8N9U0 490 aa22.34■■□□□ 1.17
GRAMD1A-207ENST00000598118 LRRN4CLQ8ND94 238 aa22.34■■□□□ 1.17
GRAMD1A-207ENST00000598118 TNRC6CQ9HCJ0 1690 aaKnown RBP22.34■■□□□ 1.17
GRAMD1A-207ENST00000598118 ERCC5P28715 1186 aaPredicted RBP22.33■■□□□ 1.17
GRAMD1A-207ENST00000598118 ADKP55263 362 aaKnown RBP22.33■■□□□ 1.17
GRAMD1A-207ENST00000598118 DPYDQ12882 1025 aa22.33■■□□□ 1.17
GRAMD1A-207ENST00000598118 AEBP2Q6ZN18 517 aaPredicted RBP22.33■■□□□ 1.17
GRAMD1A-207ENST00000598118 HOMER1Q86YM7 354 aa22.33■■□□□ 1.17
GRAMD1A-207ENST00000598118 CGNQ9P2M7 1197 aaKnown RBP22.33■■□□□ 1.17
GRAMD1A-207ENST00000598118 SBF2Q86WG5 1849 aa22.33■■□□□ 1.17
GRAMD1A-207ENST00000598118 BMP15O95972 392 aa22.33■■□□□ 1.16
GRAMD1A-207ENST00000598118 NLRP5P59047 1200 aa22.33■■□□□ 1.16
GRAMD1A-207ENST00000598118 ETF1P62495 437 aaKnown RBP22.33■■□□□ 1.16
GRAMD1A-207ENST00000598118 ELF2Q15723 593 aa22.33■■□□□ 1.16
GRAMD1A-207ENST00000598118 PFKFB3Q16875 520 aaPredicted RBP22.33■■□□□ 1.16
GRAMD1A-207ENST00000598118 SPECC1LQ69YQ0 1117 aa22.33■■□□□ 1.16
GRAMD1A-207ENST00000598118 SMYD4Q8IYR2 804 aaPredicted RBP22.33■■□□□ 1.16
GRAMD1A-207ENST00000598118 STAMQ92783 540 aa22.33■■□□□ 1.16
GRAMD1A-207ENST00000598118 PRDM10Q9NQV6 1147 aa22.33■■□□□ 1.16
GRAMD1A-207ENST00000598118 STX17P56962 302 aa22.32■■□□□ 1.16
GRAMD1A-207ENST00000598118 CUL4BQ13620 913 aa22.32■■□□□ 1.16
GRAMD1A-207ENST00000598118 NR1I3Q14994 352 aa22.32■■□□□ 1.16
GRAMD1A-207ENST00000598118 IL17AQ16552 155 aa22.32■■□□□ 1.16
GRAMD1A-207ENST00000598118 FAM182BQ5T319 152 aa22.32■■□□□ 1.16
GRAMD1A-207ENST00000598118 KLHL10Q6JEL2 608 aa22.32■■□□□ 1.16
GRAMD1A-207ENST00000598118 APTXQ7Z2E3 356 aaKnown RBP22.32■■□□□ 1.16
GRAMD1A-207ENST00000598118 ARHGEF1Q92888 912 aaKnown RBP22.32■■□□□ 1.16
GRAMD1A-207ENST00000598118 IL17RBQ9NRM6 502 aa22.32■■□□□ 1.16
GRAMD1A-207ENST00000598118 MKRN1Q9UHC7 482 aaKnown RBP22.32■■□□□ 1.16
GRAMD1A-207ENST00000598118 DZIP1Q86YF9 867 aaKnown RBP22.32■■□□□ 1.16
GRAMD1A-207ENST00000598118 DYNLL2Q96FJ2 89 aa22.31■■□□□ 1.16
GRAMD1A-207ENST00000598118 C8orf37Q96NL8 207 aa22.31■■□□□ 1.16
GRAMD1A-207ENST00000598118 DNAI1Q9UI46 699 aa22.31■■□□□ 1.16
GRAMD1A-207ENST00000598118 ARHGAP6O43182 974 aa22.31■■□□□ 1.16
GRAMD1A-207ENST00000598118 E2F4Q16254 413 aa22.31■■□□□ 1.16
GRAMD1A-207ENST00000598118 GRIK5Q16478 980 aa22.31■■□□□ 1.16
GRAMD1A-207ENST00000598118 KMT5BQ4FZB7 885 aa22.31■■□□□ 1.16
GRAMD1A-207ENST00000598118 BAG1Q99933 345 aaPredicted RBP22.31■■□□□ 1.16
GRAMD1A-207ENST00000598118 A0A1B0GTH6 734 aa22.3■■□□□ 1.16
GRAMD1A-207ENST00000598118 TEX33O43247 280 aa22.3■■□□□ 1.16
GRAMD1A-207ENST00000598118 CCP110O43303 1012 aa22.3■■□□□ 1.16
GRAMD1A-207ENST00000598118 MCM7P33993 719 aa22.3■■□□□ 1.16
GRAMD1A-207ENST00000598118 TFAP4Q01664 338 aa22.3■■□□□ 1.16
GRAMD1A-207ENST00000598118 VPS72Q15906 364 aa22.3■■□□□ 1.16
GRAMD1A-207ENST00000598118 C12orf60Q5U649 245 aa22.3■■□□□ 1.16
GRAMD1A-207ENST00000598118 SMAP1Q8IYB5 467 aaPredicted RBP22.3■■□□□ 1.16
GRAMD1A-207ENST00000598118 STAG2Q8N3U4 1231 aa22.3■■□□□ 1.16
GRAMD1A-207ENST00000598118 XDHP47989 1333 aa22.3■■□□□ 1.16
GRAMD1A-207ENST00000598118 PPP1R3GB7ZBB8 358 aa22.29■■□□□ 1.16
GRAMD1A-207ENST00000598118 FCHSD1Q86WN1 690 aa22.29■■□□□ 1.16
GRAMD1A-207ENST00000598118 SH3RF3Q8TEJ3 882 aaPredicted RBP22.29■■□□□ 1.16
GRAMD1A-207ENST00000598118 GSDMAQ96QA5 445 aa22.29■■□□□ 1.16
GRAMD1A-207ENST00000598118 CCNL1Q9UK58 526 aaPredicted RBP22.29■■□□□ 1.16
GRAMD1A-207ENST00000598118 PPP2R2CQ9Y2T4 447 aa22.29■■□□□ 1.16
GRAMD1A-207ENST00000598118 RTCBQ9Y3I0 505 aaKnown RBP22.29■■□□□ 1.16
GRAMD1A-207ENST00000598118 FAM205AQ6ZU69 1335 aa22.29■■□□□ 1.16
GRAMD1A-207ENST00000598118 NPHP1O15259 732 aa22.29■■□□□ 1.16
GRAMD1A-207ENST00000598118 TUBB4AP04350 444 aa22.29■■□□□ 1.16
GRAMD1A-207ENST00000598118 SPATA1Q5VX52 437 aa22.29■■□□□ 1.16
GRAMD1A-207ENST00000598118 GPKOWQ92917 476 aaPredicted RBP eCLIP22.29■■□□□ 1.16
GRAMD1A-207ENST00000598118 CCDC34Q96HJ3 373 aa22.29■■□□□ 1.16
GRAMD1A-207ENST00000598118 NGLY1Q96IV0 654 aa22.29■■□□□ 1.16
GRAMD1A-207ENST00000598118 MTRQ99707 1265 aa22.29■■□□□ 1.16
GRAMD1A-207ENST00000598118 PHLPP2Q6ZVD8 1323 aa22.28■■□□□ 1.16
GRAMD1A-207ENST00000598118 SYNRGQ9UMZ2 1314 aa22.28■■□□□ 1.16
GRAMD1A-207ENST00000598118 DIXDC1Q155Q3 683 aa22.28■■□□□ 1.16
GRAMD1A-207ENST00000598118 FEZ1Q99689 392 aa22.28■■□□□ 1.16
GRAMD1A-207ENST00000598118 BLZF1Q9H2G9 400 aa22.28■■□□□ 1.16
GRAMD1A-207ENST00000598118 NFIXQ14938 502 aa22.28■■□□□ 1.16
GRAMD1A-207ENST00000598118 TOGARAM2Q6ZUX3 1019 aa22.28■■□□□ 1.16
GRAMD1A-207ENST00000598118 KAT14Q9H8E8 782 aa22.28■■□□□ 1.16
GRAMD1A-207ENST00000598118 ANKIB1Q9P2G1 1089 aa22.28■■□□□ 1.16
GRAMD1A-207ENST00000598118 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.28■■□□□ 1.167e-6■■■□□ 16.5
GRAMD1A-207ENST00000598118 TAF1LQ8IZX4 1826 aa22.27■■□□□ 1.16
GRAMD1A-207ENST00000598118 STX10O60499 249 aa22.27■■□□□ 1.16
GRAMD1A-207ENST00000598118 COBLO75128 1261 aa22.27■■□□□ 1.16
GRAMD1A-207ENST00000598118 TRAPPC10P48553 1259 aa22.27■■□□□ 1.16
GRAMD1A-207ENST00000598118 SLC35G1Q2M3R5 365 aa22.27■■□□□ 1.16
GRAMD1A-207ENST00000598118 ERCC6LQ2NKX8 1250 aa22.27■■□□□ 1.16
GRAMD1A-207ENST00000598118 SPTY2D1Q68D10 685 aaPredicted RBP22.27■■□□□ 1.16
GRAMD1A-207ENST00000598118 TYW1BQ6NUM6 668 aa22.27■■□□□ 1.16
GRAMD1A-207ENST00000598118 FBXO38Q6PIJ6 1188 aa22.27■■□□□ 1.16
GRAMD1A-207ENST00000598118 PNMA1Q8ND90 353 aa22.27■■□□□ 1.16
GRAMD1A-207ENST00000598118 GPR101Q96P66 508 aaPredicted RBP22.27■■□□□ 1.16
GRAMD1A-207ENST00000598118 USP17L3A6NCW0 530 aa22.27■■□□□ 1.16
GRAMD1A-207ENST00000598118 USP17L4A6NCW7 530 aa22.27■■□□□ 1.16
GRAMD1A-207ENST00000598118 LDHBP07195 334 aaKnown RBP22.27■■□□□ 1.16
GRAMD1A-207ENST00000598118 KIF5BP33176 963 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms