RNA–Protein interactions for RNA: ENST00000597168.1

SH2D3A-205, Transcript of SH2 domain containing 3A, humanhuman

TSL 5

Gene SH2D3A, Length 512 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-205ENST00000597168 NTRK3Q16288 839 aa13.35□□□□□ -0.27
SH2D3A-205ENST00000597168 CPLX2Q6PUV4 134 aaKnown RBP13.35□□□□□ -0.27
SH2D3A-205ENST00000597168 LDHDQ86WU2 507 aa13.35□□□□□ -0.27
SH2D3A-205ENST00000597168 LRRC47Q8N1G4 583 aaKnown RBP13.35□□□□□ -0.27
SH2D3A-205ENST00000597168 CTCFLQ8NI51 663 aaPredicted RBP13.35□□□□□ -0.27
SH2D3A-205ENST00000597168 RBM28Q9NW13 759 aaKnown RBP13.35□□□□□ -0.27
SH2D3A-205ENST00000597168 MTMR7Q9Y216 660 aa13.35□□□□□ -0.27
SH2D3A-205ENST00000597168 SSC5DA1L4H1 1573 aa13.35□□□□□ -0.27
SH2D3A-205ENST00000597168 A0A1W2PRG0 241 aa13.34□□□□□ -0.27
SH2D3A-205ENST00000597168 PPP1R12BO60237 982 aaPredicted RBP13.34□□□□□ -0.27
SH2D3A-205ENST00000597168 JAK2O60674 1132 aa13.34□□□□□ -0.27
SH2D3A-205ENST00000597168 NF2P35240 595 aa13.34□□□□□ -0.27
SH2D3A-205ENST00000597168 MAP3K9P80192 1104 aa13.34□□□□□ -0.27
SH2D3A-205ENST00000597168 SCYL3Q8IZE3 742 aa13.34□□□□□ -0.27
SH2D3A-205ENST00000597168 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.34□□□□□ -0.27
SH2D3A-205ENST00000597168 ZKSCAN4Q969J2 545 aaPredicted RBP13.34□□□□□ -0.27
SH2D3A-205ENST00000597168 WRNIP1Q96S55 665 aa13.34□□□□□ -0.27
SH2D3A-205ENST00000597168 ARHGEF10LQ9HCE6 1279 aa13.34□□□□□ -0.27
SH2D3A-205ENST00000597168 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.34□□□□□ -0.27
SH2D3A-205ENST00000597168 MYH4Q9Y623 1939 aa13.33□□□□□ -0.28
SH2D3A-205ENST00000597168 PTPDC1A2A3K4 754 aa13.33□□□□□ -0.28
SH2D3A-205ENST00000597168 PALM3A6NDB9 673 aaPredicted RBP13.33□□□□□ -0.28
SH2D3A-205ENST00000597168 USP17L5A8MUK1 530 aa13.33□□□□□ -0.28
SH2D3A-205ENST00000597168 SNHG28P0DPA3 235 aa13.33□□□□□ -0.28
SH2D3A-205ENST00000597168 PDHBP11177 359 aa13.33□□□□□ -0.28
SH2D3A-205ENST00000597168 IFNAR1P17181 557 aa13.33□□□□□ -0.28
SH2D3A-205ENST00000597168 KIF5BP33176 963 aa13.33□□□□□ -0.28
SH2D3A-205ENST00000597168 ECE1P42892 770 aa13.33□□□□□ -0.28
SH2D3A-205ENST00000597168 GNAQP50148 359 aa13.33□□□□□ -0.28
SH2D3A-205ENST00000597168 HMGN5P82970 282 aaKnown RBP13.33□□□□□ -0.28
SH2D3A-205ENST00000597168 USP17L2Q6R6M4 530 aa13.33□□□□□ -0.28
SH2D3A-205ENST00000597168 CCDC84Q86UT8 332 aaPredicted RBP13.33□□□□□ -0.28
SH2D3A-205ENST00000597168 CMTR1Q8N1G2 835 aaKnown RBP13.33□□□□□ -0.28
SH2D3A-205ENST00000597168 STAG2Q8N3U4 1231 aa13.33□□□□□ -0.28
SH2D3A-205ENST00000597168 ACER1Q8TDN7 264 aa13.33□□□□□ -0.28
SH2D3A-205ENST00000597168 DDX11Q96FC9 970 aa13.33□□□□□ -0.28
SH2D3A-205ENST00000597168 MAD2L2Q9UI95 211 aa13.33□□□□□ -0.28
SH2D3A-205ENST00000597168 SYNPO2Q9UMS6 1093 aa13.33□□□□□ -0.28
SH2D3A-205ENST00000597168 TMX2Q9Y320 296 aa13.33□□□□□ -0.28
SH2D3A-205ENST00000597168 ATAD5Q96QE3 1844 aa13.32□□□□□ -0.28
SH2D3A-205ENST00000597168 F5H6K3 240 aa13.32□□□□□ -0.28
SH2D3A-205ENST00000597168 PPFIA3O75145 1194 aa13.32□□□□□ -0.28
SH2D3A-205ENST00000597168 CDKL5O76039 1030 aa13.32□□□□□ -0.28
SH2D3A-205ENST00000597168 PLEKHA8P1O95397 391 aa13.32□□□□□ -0.28
SH2D3A-205ENST00000597168 PARP1P09874 1014 aaKnown RBP13.32□□□□□ -0.28
SH2D3A-205ENST00000597168 FDPSP14324 419 aaKnown RBP13.32□□□□□ -0.28
SH2D3A-205ENST00000597168 IREB2P48200 963 aaKnown RBP13.32□□□□□ -0.28
SH2D3A-205ENST00000597168 KLRC3Q07444 240 aa13.32□□□□□ -0.28
SH2D3A-205ENST00000597168 SSRP1Q08945 709 aaKnown RBP13.32□□□□□ -0.28
SH2D3A-205ENST00000597168 NOL9Q5SY16 702 aaKnown RBP13.32□□□□□ -0.28
SH2D3A-205ENST00000597168 SLFN13Q68D06 897 aa13.32□□□□□ -0.28
SH2D3A-205ENST00000597168 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.32□□□□□ -0.28
SH2D3A-205ENST00000597168 TMTC3Q6ZXV5 915 aa13.32□□□□□ -0.28
SH2D3A-205ENST00000597168 NBPF11Q86T75 865 aa13.32□□□□□ -0.28
SH2D3A-205ENST00000597168 CCDC82Q8N4S0 544 aa13.32□□□□□ -0.28
SH2D3A-205ENST00000597168 SRBD1Q8N5C6 995 aaKnown RBP13.32□□□□□ -0.28
SH2D3A-205ENST00000597168 CHMP5Q9NZZ3 219 aa13.32□□□□□ -0.28
SH2D3A-205ENST00000597168 ORC3Q9UBD5 711 aaPredicted RBP13.32□□□□□ -0.28
SH2D3A-205ENST00000597168 CIZ1Q9ULV3 898 aaPredicted RBP13.32□□□□□ -0.28
SH2D3A-205ENST00000597168 TRAF5O00463 557 aa13.31□□□□□ -0.28
SH2D3A-205ENST00000597168 FMNL1O95466 1100 aaPredicted RBP13.31□□□□□ -0.28
SH2D3A-205ENST00000597168 GOLGA8HP0CJ92 632 aa13.31□□□□□ -0.28
SH2D3A-205ENST00000597168 PTPRAP18433 802 aa13.31□□□□□ -0.28
SH2D3A-205ENST00000597168 FMR1Q06787 632 aaKnown RBP eCLIP13.31□□□□□ -0.28
SH2D3A-205ENST00000597168 ZNF543Q08ER8 600 aa13.31□□□□□ -0.28
SH2D3A-205ENST00000597168 FUT2Q10981 343 aa13.31□□□□□ -0.28
SH2D3A-205ENST00000597168 MAP3K11Q16584 847 aa13.31□□□□□ -0.28
SH2D3A-205ENST00000597168 ASPRV1Q53RT3 343 aa13.31□□□□□ -0.28
SH2D3A-205ENST00000597168 MOB2Q70IA6 237 aa13.31□□□□□ -0.28
SH2D3A-205ENST00000597168 RASGRP2Q7LDG7 609 aa13.31□□□□□ -0.28
SH2D3A-205ENST00000597168 FAM184AQ8NB25 1140 aa13.31□□□□□ -0.28
SH2D3A-205ENST00000597168 GMCL1P1Q8NEA9 526 aa13.31□□□□□ -0.28
SH2D3A-205ENST00000597168 PHKBQ93100 1093 aa13.31□□□□□ -0.28
SH2D3A-205ENST00000597168 LZTS2Q9BRK4 669 aa13.31□□□□□ -0.28
SH2D3A-205ENST00000597168 WDR18Q9BV38 432 aa13.31□□□□□ -0.28
SH2D3A-205ENST00000597168 SLC26A6Q9BXS9 759 aa13.31□□□□□ -0.28
SH2D3A-205ENST00000597168 PICK1Q9NRD5 415 aa13.31□□□□□ -0.28
SH2D3A-205ENST00000597168 KLRF2D3W0D1 207 aa13.3□□□□□ -0.28
SH2D3A-205ENST00000597168 PRPF3O43395 683 aaKnown RBP13.3□□□□□ -0.28
SH2D3A-205ENST00000597168 NDUFB10O96000 172 aa13.3□□□□□ -0.28
SH2D3A-205ENST00000597168 SMARCA1P28370 1054 aa13.3□□□□□ -0.28
SH2D3A-205ENST00000597168 TTLL12Q14166 644 aaPredicted RBP13.3□□□□□ -0.28
SH2D3A-205ENST00000597168 LARP1BQ659C4 914 aaKnown RBP13.3□□□□□ -0.28
SH2D3A-205ENST00000597168 CHADLQ6NUI6 762 aa13.3□□□□□ -0.28
SH2D3A-205ENST00000597168 ARMC9Q7Z3E5 817 aa13.3□□□□□ -0.28
SH2D3A-205ENST00000597168 DCAF4Q8WV16 495 aa13.3□□□□□ -0.28
SH2D3A-205ENST00000597168 SH2D4AQ9H788 454 aa13.3□□□□□ -0.28
SH2D3A-205ENST00000597168 VCPKMTQ9H867 229 aa13.3□□□□□ -0.28
SH2D3A-205ENST00000597168 AS3MTQ9HBK9 375 aa13.3□□□□□ -0.28
SH2D3A-205ENST00000597168 GOPCQ9HD26 462 aa13.3□□□□□ -0.28
SH2D3A-205ENST00000597168 GPCPD1Q9NPB8 672 aa13.3□□□□□ -0.28
SH2D3A-205ENST00000597168 FRMPD2Q68DX3 1309 aaPredicted RBP13.3□□□□□ -0.28
SH2D3A-205ENST00000597168 STK36Q9NRP7 1315 aa13.3□□□□□ -0.28
SH2D3A-205ENST00000597168 DOCK1Q14185 1865 aa13.29□□□□□ -0.28
SH2D3A-205ENST00000597168 USP17L10C9JJH3 530 aa13.29□□□□□ -0.28
SH2D3A-205ENST00000597168 RAD21O60216 631 aa13.29□□□□□ -0.28
SH2D3A-205ENST00000597168 ITGBL1O95965 494 aaPredicted RBP13.29□□□□□ -0.28
SH2D3A-205ENST00000597168 SYT1P21579 422 aa13.29□□□□□ -0.28
SH2D3A-205ENST00000597168 SLC1A4P43007 532 aa13.29□□□□□ -0.28
SH2D3A-205ENST00000597168 NUCB2P80303 420 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms