RNA–Protein interactions for RNA: ENST00000596398.5

LINC00343-204, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 809 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-204ENST00000596398 TRMT112Q9UI30 125 aaKnown RBP9.96□□□□□ -0.82
LINC00343-204ENST00000596398 NOD1Q9Y239 953 aa9.96□□□□□ -0.82
LINC00343-204ENST00000596398 BACH1O14867 736 aa9.95□□□□□ -0.82
LINC00343-204ENST00000596398 PCBP4P57723 403 aaKnown RBP9.95□□□□□ -0.82
LINC00343-204ENST00000596398 GTF2IP78347 998 aa9.95□□□□□ -0.82
LINC00343-204ENST00000596398 TAF7Q15545 349 aaPredicted RBP9.95□□□□□ -0.82
LINC00343-204ENST00000596398 ZNF468Q5VIY5 522 aaPredicted RBP9.95□□□□□ -0.82
LINC00343-204ENST00000596398 NLRP10Q86W26 655 aa9.95□□□□□ -0.82
LINC00343-204ENST00000596398 PRR12Q9ULL5 1215 aa9.95□□□□□ -0.82
LINC00343-204ENST00000596398 COG6Q9Y2V7 657 aa9.95□□□□□ -0.82
LINC00343-204ENST00000596398 WNT10BO00744 389 aa9.94□□□□□ -0.82
LINC00343-204ENST00000596398 ZBTB7BO15156 539 aaPredicted RBP9.94□□□□□ -0.82
LINC00343-204ENST00000596398 SASH1O94885 1247 aa9.94□□□□□ -0.82
LINC00343-204ENST00000596398 ANXA1P04083 346 aa9.94□□□□□ -0.82
LINC00343-204ENST00000596398 TXLNAP40222 546 aa9.94□□□□□ -0.82
LINC00343-204ENST00000596398 CNGB1Q14028 1251 aaPredicted RBP9.94□□□□□ -0.82
LINC00343-204ENST00000596398 CC2D1BQ5T0F9 858 aaKnown RBP9.94□□□□□ -0.82
LINC00343-204ENST00000596398 ZNF358Q9NW07 568 aa9.94□□□□□ -0.82
LINC00343-204ENST00000596398 MARK1Q9P0L2 795 aa9.94□□□□□ -0.82
LINC00343-204ENST00000596398 SCHIP1Q9P0W5 487 aaPredicted RBP9.94□□□□□ -0.82
LINC00343-204ENST00000596398 STAP2Q9UGK3 403 aa9.94□□□□□ -0.82
LINC00343-204ENST00000596398 STXBP5LQ9Y2K9 1186 aa9.94□□□□□ -0.82
LINC00343-204ENST00000596398 SH3TC1Q8TE82 1336 aa9.93□□□□□ -0.82
LINC00343-204ENST00000596398 A0A1W2PPC1 479 aa9.93□□□□□ -0.82
LINC00343-204ENST00000596398 EFSO43281 561 aa9.93□□□□□ -0.82
LINC00343-204ENST00000596398 UFL1O94874 794 aa9.93□□□□□ -0.82
LINC00343-204ENST00000596398 ZBTB48P10074 688 aaPredicted RBP9.93□□□□□ -0.82
LINC00343-204ENST00000596398 CHRNA4P43681 627 aa9.93□□□□□ -0.82
LINC00343-204ENST00000596398 EIF4A1P60842 406 aaKnown RBP9.93□□□□□ -0.82
LINC00343-204ENST00000596398 PROSER3Q2NL68 480 aa9.93□□□□□ -0.82
LINC00343-204ENST00000596398 LRP10Q7Z4F1 713 aa9.93□□□□□ -0.82
LINC00343-204ENST00000596398 UBE2Q1Q7Z7E8 422 aa9.93□□□□□ -0.82
LINC00343-204ENST00000596398 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.93□□□□□ -0.82
LINC00343-204ENST00000596398 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.93□□□□□ -0.82
LINC00343-204ENST00000596398 ZDHHC1Q8WTX9 485 aa9.93□□□□□ -0.82
LINC00343-204ENST00000596398 ARHGAP39Q9C0H5 1083 aa9.93□□□□□ -0.82
LINC00343-204ENST00000596398 PRDM6Q9NQX0 595 aa9.93□□□□□ -0.82
LINC00343-204ENST00000596398 NR2E3Q9Y5X4 410 aa9.93□□□□□ -0.82
LINC00343-204ENST00000596398 TTC28Q96AY4 2481 aa9.93□□□□□ -0.82
LINC00343-204ENST00000596398 ZNF646O15015 1829 aaPredicted RBP9.92□□□□□ -0.82
LINC00343-204ENST00000596398 USP17L3A6NCW0 530 aa9.92□□□□□ -0.82
LINC00343-204ENST00000596398 USP17L4A6NCW7 530 aa9.92□□□□□ -0.82
LINC00343-204ENST00000596398 LZTS3O60299 673 aaPredicted RBP9.92□□□□□ -0.82
LINC00343-204ENST00000596398 LAMC2Q13753 1193 aa9.92□□□□□ -0.82
LINC00343-204ENST00000596398 OTUD7BQ6GQQ9 843 aa9.92□□□□□ -0.82
LINC00343-204ENST00000596398 USP17L1Q7RTZ2 530 aa9.92□□□□□ -0.82
LINC00343-204ENST00000596398 HTATIP2Q9BUP3 242 aa9.92□□□□□ -0.82
LINC00343-204ENST00000596398 ALG2Q9H553 416 aa9.92□□□□□ -0.82
LINC00343-204ENST00000596398 ANKIB1Q9P2G1 1089 aa9.92□□□□□ -0.82
LINC00343-204ENST00000596398 SSC5DA1L4H1 1573 aa9.92□□□□□ -0.82
LINC00343-204ENST00000596398 HSPA5P11021 654 aaKnown RBP9.91□□□□□ -0.82
LINC00343-204ENST00000596398 AIMP1Q12904 312 aaKnown RBP9.91□□□□□ -0.82
LINC00343-204ENST00000596398 NCOA4Q13772 614 aa9.91□□□□□ -0.82
LINC00343-204ENST00000596398 TEAD4Q15561 434 aa9.91□□□□□ -0.82
LINC00343-204ENST00000596398 FAM89AQ96GI7 184 aa9.91□□□□□ -0.82
LINC00343-204ENST00000596398 MTMR10Q9NXD2 777 aa9.91□□□□□ -0.82
LINC00343-204ENST00000596398 PODXL2Q9NZ53 605 aa9.91□□□□□ -0.82
LINC00343-204ENST00000596398 CDH23Q9H251 3354 aa9.91□□□□□ -0.82
LINC00343-204ENST00000596398 EIF2S2P20042 333 aaKnown RBP9.9□□□□□ -0.82
LINC00343-204ENST00000596398 RPS8P62241 208 aaKnown RBP9.9□□□□□ -0.82
LINC00343-204ENST00000596398 SF3B3Q15393 1217 aaKnown RBP9.9□□□□□ -0.82
LINC00343-204ENST00000596398 TRIM11Q96F44 468 aa9.9□□□□□ -0.82
LINC00343-204ENST00000596398 RAPGEFL1Q9UHV5 662 aa9.9□□□□□ -0.82
LINC00343-204ENST00000596398 NOS2P35228 1153 aa9.89□□□□□ -0.83
LINC00343-204ENST00000596398 EPHA4P54764 986 aa9.89□□□□□ -0.83
LINC00343-204ENST00000596398 ARHGEF6Q15052 776 aa9.89□□□□□ -0.83
LINC00343-204ENST00000596398 TAF1CQ15572 869 aaPredicted RBP9.89□□□□□ -0.83
LINC00343-204ENST00000596398 MAP3K11Q16584 847 aa9.89□□□□□ -0.83
LINC00343-204ENST00000596398 DACT2Q5SW24 774 aa9.89□□□□□ -0.83
LINC00343-204ENST00000596398 LRRC69Q6ZNQ3 347 aa9.89□□□□□ -0.83
LINC00343-204ENST00000596398 COPS6Q7L5N1 327 aa9.89□□□□□ -0.83
LINC00343-204ENST00000596398 APOBEC3FQ8IUX4 373 aaKnown RBP9.89□□□□□ -0.83
LINC00343-204ENST00000596398 OGFOD1Q8N543 542 aa9.89□□□□□ -0.83
LINC00343-204ENST00000596398 DEFB129Q9H1M3 183 aa9.89□□□□□ -0.83
LINC00343-204ENST00000596398 SEC31BQ9NQW1 1179 aa9.89□□□□□ -0.83
LINC00343-204ENST00000596398 DNAH12Q6ZR08 3092 aa9.89□□□□□ -0.83
LINC00343-204ENST00000596398 DLG5Q8TDM6 1919 aa9.88□□□□□ -0.83
LINC00343-204ENST00000596398 ALPK3Q96L96 1907 aa9.88□□□□□ -0.83
LINC00343-204ENST00000596398 USP17L5A8MUK1 530 aa9.88□□□□□ -0.83
LINC00343-204ENST00000596398 HTATSF1O43719 755 aaKnown RBP9.88□□□□□ -0.83
LINC00343-204ENST00000596398 GJA8P48165 433 aa9.88□□□□□ -0.83
LINC00343-204ENST00000596398 HSP90AB3PQ58FF7 597 aa9.88□□□□□ -0.83
LINC00343-204ENST00000596398 SLC9A9Q8IVB4 645 aa9.88□□□□□ -0.83
LINC00343-204ENST00000596398 DEPDC4Q8N2C3 294 aa9.88□□□□□ -0.83
LINC00343-204ENST00000596398 XAGE3Q8WTP9 111 aa9.88□□□□□ -0.83
LINC00343-204ENST00000596398 BRI3BPQ8WY22 251 aa9.88□□□□□ -0.83
LINC00343-204ENST00000596398 PLVAPQ9BX97 442 aa9.88□□□□□ -0.83
LINC00343-204ENST00000596398 ZNF232Q9UNY5 417 aa9.88□□□□□ -0.83
LINC00343-204ENST00000596398 OTOFQ9HC10 1997 aa9.88□□□□□ -0.83
LINC00343-204ENST00000596398 ELOA3CA0A087WX78 387 aaPredicted RBP9.87□□□□□ -0.83
LINC00343-204ENST00000596398 ELOA3DA6NLF2 546 aaPredicted RBP9.87□□□□□ -0.83
LINC00343-204ENST00000596398 EML1O00423 815 aa9.87□□□□□ -0.83
LINC00343-204ENST00000596398 PPP1R12BO60237 982 aaPredicted RBP9.87□□□□□ -0.83
LINC00343-204ENST00000596398 FARP2O94887 1054 aaPredicted RBP9.87□□□□□ -0.83
LINC00343-204ENST00000596398 CCL5P13501 91 aa9.87□□□□□ -0.83
LINC00343-204ENST00000596398 LACTBP83111 547 aaPredicted RBP9.87□□□□□ -0.83
LINC00343-204ENST00000596398 ELOA3BQ3SY89 546 aa9.87□□□□□ -0.83
LINC00343-204ENST00000596398 TBCELQ5QJ74 424 aa9.87□□□□□ -0.83
LINC00343-204ENST00000596398 SYT9Q86SS6 491 aa9.87□□□□□ -0.83
LINC00343-204ENST00000596398 WWC1Q8IX03 1113 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms