RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 PDE6AP16499 860 aa19.21■□□□□ 0.67
USHBP1-205ENST00000595993 MX1P20591 662 aa19.21■□□□□ 0.67
USHBP1-205ENST00000595993 PTPREP23469 700 aa19.21■□□□□ 0.67
USHBP1-205ENST00000595993 CCNA1P78396 465 aa19.21■□□□□ 0.67
USHBP1-205ENST00000595993 SLFNL1Q499Z3 407 aa19.21■□□□□ 0.67
USHBP1-205ENST00000595993 CERKLQ49MI3 558 aaPredicted RBP19.21■□□□□ 0.67
USHBP1-205ENST00000595993 ACER1Q8TDN7 264 aa19.21■□□□□ 0.67
USHBP1-205ENST00000595993 FEZ1Q99689 392 aa19.21■□□□□ 0.67
USHBP1-205ENST00000595993 RLFQ13129 1914 aa19.21■□□□□ 0.67
USHBP1-205ENST00000595993 TCRBV5S4A2TA0A5A2 114 aa19.2■□□□□ 0.66
USHBP1-205ENST00000595993 SLC15A5A6NIM6 579 aa19.2■□□□□ 0.66
USHBP1-205ENST00000595993 GLRX3O76003 335 aaKnown RBP19.2■□□□□ 0.66
USHBP1-205ENST00000595993 CHGBP05060 677 aa19.2■□□□□ 0.66
USHBP1-205ENST00000595993 PLCD1P51178 756 aa19.2■□□□□ 0.66
USHBP1-205ENST00000595993 NUCB1Q02818 461 aa19.2■□□□□ 0.66
USHBP1-205ENST00000595993 GRB14Q14449 540 aa19.2■□□□□ 0.66
USHBP1-205ENST00000595993 LRRC26Q2I0M4 334 aa19.2■□□□□ 0.66
USHBP1-205ENST00000595993 ABCB5Q2M3G0 1257 aa19.2■□□□□ 0.66
USHBP1-205ENST00000595993 SLC9C2Q5TAH2 1124 aa19.2■□□□□ 0.66
USHBP1-205ENST00000595993 CCAR1Q8IX12 1150 aaKnown RBP19.2■□□□□ 0.66
USHBP1-205ENST00000595993 FLRT1Q9NZU1 646 aa19.2■□□□□ 0.66
USHBP1-205ENST00000595993 BTBD7Q9P203 1132 aa19.2■□□□□ 0.66
USHBP1-205ENST00000595993 SPDYE16A6NNV3 312 aaPredicted RBP19.19■□□□□ 0.66
USHBP1-205ENST00000595993 RAB3GAP1Q15042 981 aa19.19■□□□□ 0.66
USHBP1-205ENST00000595993 ZYXQ15942 572 aaKnown RBP19.19■□□□□ 0.66
USHBP1-205ENST00000595993 CHD1LQ86WJ1 897 aa19.19■□□□□ 0.66
USHBP1-205ENST00000595993 ZBTB47Q9UFB7 747 aaPredicted RBP19.19■□□□□ 0.66
USHBP1-205ENST00000595993 ZNF532Q9HCE3 1301 aa19.19■□□□□ 0.66
USHBP1-205ENST00000595993 UNC80Q8N2C7 3258 aa19.19■□□□□ 0.66
USHBP1-205ENST00000595993 SLC17A8Q8NDX2 589 aa19.18■□□□□ 0.66
USHBP1-205ENST00000595993 ADD2P35612 726 aa19.17■□□□□ 0.66
USHBP1-205ENST00000595993 PDE1AP54750 535 aa19.17■□□□□ 0.66
USHBP1-205ENST00000595993 MFSD14CQ5VZR4 134 aa19.17■□□□□ 0.66
USHBP1-205ENST00000595993 UBE2OQ9C0C9 1292 aaKnown RBP19.17■□□□□ 0.66
USHBP1-205ENST00000595993 RPAP3Q9H6T3 665 aaPredicted RBP19.17■□□□□ 0.66
USHBP1-205ENST00000595993 CABP5Q9NP86 173 aa19.17■□□□□ 0.66
USHBP1-205ENST00000595993 CUL9Q8IWT3 2517 aa19.17■□□□□ 0.66
USHBP1-205ENST00000595993 A0A1W2PRG0 241 aa19.16■□□□□ 0.66
USHBP1-205ENST00000595993 ERC2O15083 957 aa19.16■□□□□ 0.66
USHBP1-205ENST00000595993 MSCO60682 206 aa19.16■□□□□ 0.66
USHBP1-205ENST00000595993 SEPT2Q15019 361 aa19.16■□□□□ 0.66
USHBP1-205ENST00000595993 DEFB123Q8N688 67 aa19.16■□□□□ 0.66
USHBP1-205ENST00000595993 NPLOC4Q8TAT6 608 aa19.16■□□□□ 0.66
USHBP1-205ENST00000595993 DDX20Q9UHI6 824 aaKnown RBP19.16■□□□□ 0.66
USHBP1-205ENST00000595993 LTBP2Q14767 1821 aa19.16■□□□□ 0.66
USHBP1-205ENST00000595993 PARP14Q460N5 1801 aa19.16■□□□□ 0.66
USHBP1-205ENST00000595993 MAGEB6P1A0A0J9YX57 407 aa19.15■□□□□ 0.66
USHBP1-205ENST00000595993 EVX2Q03828 476 aa19.15■□□□□ 0.66
USHBP1-205ENST00000595993 KBTBD3Q8NAB2 608 aa19.15■□□□□ 0.66
USHBP1-205ENST00000595993 TRPV1Q8NER1 839 aa19.15■□□□□ 0.66
USHBP1-205ENST00000595993 LPAR1Q92633 364 aa19.15■□□□□ 0.66
USHBP1-205ENST00000595993 CWC22Q9HCG8 908 aaKnown RBP19.15■□□□□ 0.66
USHBP1-205ENST00000595993 MTMR10Q9NXD2 777 aa19.15■□□□□ 0.66
USHBP1-205ENST00000595993 CYBAP13498 195 aa19.14■□□□□ 0.65
USHBP1-205ENST00000595993 Q7L0L9 218 aa19.14■□□□□ 0.65
USHBP1-205ENST00000595993 CRNKL1Q9BZJ0 848 aaKnown RBP19.14■□□□□ 0.65
USHBP1-205ENST00000595993 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.14■□□□□ 0.65
USHBP1-205ENST00000595993 STXBP5LQ9Y2K9 1186 aa19.14■□□□□ 0.65
USHBP1-205ENST00000595993 IVNS1ABPQ9Y6Y0 642 aa19.14■□□□□ 0.65
USHBP1-205ENST00000595993 DNM1LO00429 736 aa19.13■□□□□ 0.65
USHBP1-205ENST00000595993 DLL1O00548 723 aa19.13■□□□□ 0.65
USHBP1-205ENST00000595993 STRNO43815 780 aa19.13■□□□□ 0.65
USHBP1-205ENST00000595993 POLR3DP05423 398 aaPredicted RBP19.13■□□□□ 0.65
USHBP1-205ENST00000595993 PDE4AP27815 886 aa19.13■□□□□ 0.65
USHBP1-205ENST00000595993 ATP2B2Q01814 1243 aa19.13■□□□□ 0.65
USHBP1-205ENST00000595993 COG2Q14746 738 aa19.13■□□□□ 0.65
USHBP1-205ENST00000595993 UBE3CQ15386 1083 aa19.13■□□□□ 0.65
USHBP1-205ENST00000595993 OLFML2BQ68BL8 750 aa19.13■□□□□ 0.65
USHBP1-205ENST00000595993 PLEKHM2Q8IWE5 1019 aa19.13■□□□□ 0.65
USHBP1-205ENST00000595993 LCORLQ8N3X6 602 aa19.13■□□□□ 0.65
USHBP1-205ENST00000595993 SHCBP1Q8NEM2 672 aa19.13■□□□□ 0.65
USHBP1-205ENST00000595993 MOV10L1Q9BXT6 1211 aaKnown RBP19.13■□□□□ 0.65
USHBP1-205ENST00000595993 DCP1AQ9NPI6 582 aaPredicted RBP19.13■□□□□ 0.65
USHBP1-205ENST00000595993 MYH8P13535 1937 aa19.12■□□□□ 0.65
USHBP1-205ENST00000595993 CYP2C19P33261 490 aa19.12■□□□□ 0.65
USHBP1-205ENST00000595993 WDR78Q5VTH9 848 aa19.12■□□□□ 0.65
USHBP1-205ENST00000595993 ARMT1Q9H993 441 aa19.12■□□□□ 0.65
USHBP1-205ENST00000595993 MCM9Q9NXL9 1143 aa19.12■□□□□ 0.65
USHBP1-205ENST00000595993 HOXC10Q9NYD6 342 aa19.12■□□□□ 0.65
USHBP1-205ENST00000595993 MBD4O95243 580 aa19.11■□□□□ 0.65
USHBP1-205ENST00000595993 CENPBP07199 599 aaPredicted RBP19.11■□□□□ 0.65
USHBP1-205ENST00000595993 MDM2Q00987 491 aaPredicted RBP19.11■□□□□ 0.65
USHBP1-205ENST00000595993 KIAA1755Q5JYT7 1200 aa19.11■□□□□ 0.65
USHBP1-205ENST00000595993 ZSCAN25Q6NSZ9 544 aa19.11■□□□□ 0.65
USHBP1-205ENST00000595993 TMEM179Q6ZVK1 233 aa19.11■□□□□ 0.65
USHBP1-205ENST00000595993 SIAH1Q8IUQ4 282 aa19.11■□□□□ 0.65
USHBP1-205ENST00000595993 SENP6Q9GZR1 1112 aaPredicted RBP19.11■□□□□ 0.65
USHBP1-205ENST00000595993 SPATC1LQ9H0A9 340 aa19.11■□□□□ 0.65
USHBP1-205ENST00000595993 BAZ2AQ9UIF9 1905 aaKnown RBP19.11■□□□□ 0.65
USHBP1-205ENST00000595993 POTEB2H3BUK9 544 aa19.1■□□□□ 0.65
USHBP1-205ENST00000595993 ADORA2AP29274 412 aa19.1■□□□□ 0.65
USHBP1-205ENST00000595993 FAM109BQ6ICB4 259 aaPredicted RBP19.1■□□□□ 0.65
USHBP1-205ENST00000595993 ABRAQ8N0Z2 381 aa19.1■□□□□ 0.65
USHBP1-205ENST00000595993 MB21D1Q8N884 522 aa19.1■□□□□ 0.65
USHBP1-205ENST00000595993 SDR42E1Q8WUS8 393 aa19.1■□□□□ 0.65
USHBP1-205ENST00000595993 PUS7LQ9H0K6 701 aaKnown RBP19.1■□□□□ 0.65
USHBP1-205ENST00000595993 OSBPL3Q9H4L5 887 aa19.1■□□□□ 0.65
USHBP1-205ENST00000595993 SWAP70Q9UH65 585 aa19.1■□□□□ 0.65
USHBP1-205ENST00000595993 RNF113AO15541 343 aaKnown RBP19.09■□□□□ 0.65
USHBP1-205ENST00000595993 CYP2D6P10635 497 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms