RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 CAPN2P17655 700 aa21.14■□□□□ 0.97
SHKBP1-204ENST00000594862 RASA1P20936 1047 aa21.14■□□□□ 0.97
SHKBP1-204ENST00000594862 NKX2-3Q8TAU0 364 aa21.14■□□□□ 0.97
SHKBP1-204ENST00000594862 TANGO6Q9C0B7 1094 aa21.14■□□□□ 0.97
SHKBP1-204ENST00000594862 HOXC10Q9NYD6 342 aa21.14■□□□□ 0.97
SHKBP1-204ENST00000594862 RBPJLQ9UBG7 517 aa21.14■□□□□ 0.97
SHKBP1-204ENST00000594862 BIN2Q9UBW5 565 aaPredicted RBP21.14■□□□□ 0.97
SHKBP1-204ENST00000594862 GABRQQ9UN88 632 aa21.14■□□□□ 0.97
SHKBP1-204ENST00000594862 MFAP1P55081 439 aaKnown RBP21.13■□□□□ 0.97
SHKBP1-204ENST00000594862 COG2Q14746 738 aa21.13■□□□□ 0.97
SHKBP1-204ENST00000594862 PPP4R3BQ5MIZ7 849 aa21.13■□□□□ 0.97
SHKBP1-204ENST00000594862 PLEKHM2Q8IWE5 1019 aa21.13■□□□□ 0.97
SHKBP1-204ENST00000594862 ZNF444Q8N0Y2 327 aaPredicted RBP21.13■□□□□ 0.97
SHKBP1-204ENST00000594862 PAGR1Q9BTK6 254 aa21.13■□□□□ 0.97
SHKBP1-204ENST00000594862 CWC22Q9HCG8 908 aaKnown RBP21.13■□□□□ 0.97
SHKBP1-204ENST00000594862 TXNRD2Q9NNW7 524 aa21.13■□□□□ 0.97
SHKBP1-204ENST00000594862 SYNPO2Q9UMS6 1093 aa21.13■□□□□ 0.97
SHKBP1-204ENST00000594862 POTEFA5A3E0 1075 aa21.12■□□□□ 0.97
SHKBP1-204ENST00000594862 HIP1O00291 1037 aa21.12■□□□□ 0.97
SHKBP1-204ENST00000594862 EEF2P13639 858 aaKnown RBP21.12■□□□□ 0.97
SHKBP1-204ENST00000594862 PPARAQ07869 468 aa21.12■□□□□ 0.97
SHKBP1-204ENST00000594862 MCMDC2Q4G0Z9 681 aa21.12■□□□□ 0.97
SHKBP1-204ENST00000594862 MB21D1Q8N884 522 aa21.12■□□□□ 0.97
SHKBP1-204ENST00000594862 A0A0G2JMZ2 1700 aa21.12■□□□□ 0.97
SHKBP1-204ENST00000594862 PLIN4Q96Q06 1357 aa21.11■□□□□ 0.97
SHKBP1-204ENST00000594862 SPDYE16A6NNV3 312 aaPredicted RBP21.11■□□□□ 0.97
SHKBP1-204ENST00000594862 SMIM22K7EJ46 135 aa21.11■□□□□ 0.97
SHKBP1-204ENST00000594862 ATP2B2Q01814 1243 aa21.11■□□□□ 0.97
SHKBP1-204ENST00000594862 SIAH1Q8IUQ4 282 aa21.11■□□□□ 0.97
SHKBP1-204ENST00000594862 TRMT44Q8IYL2 757 aaKnown RBP21.11■□□□□ 0.97
SHKBP1-204ENST00000594862 RILPL2Q969X0 211 aa21.11■□□□□ 0.97
SHKBP1-204ENST00000594862 NUDT12Q9BQG2 462 aa21.11■□□□□ 0.97
SHKBP1-204ENST00000594862 NYAP2Q9P242 653 aa21.11■□□□□ 0.97
SHKBP1-204ENST00000594862 ZMYM6O95789 1325 aa21.1■□□□□ 0.97
SHKBP1-204ENST00000594862 ALX1Q15699 326 aa21.1■□□□□ 0.97
SHKBP1-204ENST00000594862 CLEC10AQ8IUN9 316 aa21.1■□□□□ 0.97
SHKBP1-204ENST00000594862 HMGCRP04035 888 aa21.09■□□□□ 0.97
SHKBP1-204ENST00000594862 XRCC5P13010 732 aaKnown RBP21.09■□□□□ 0.97
SHKBP1-204ENST00000594862 PLEKHH3Q7Z736 793 aa21.09■□□□□ 0.97
SHKBP1-204ENST00000594862 GJD2Q9UKL4 321 aa21.09■□□□□ 0.97
SHKBP1-204ENST00000594862 CCDC171Q6TFL3 1326 aa21.08■□□□□ 0.97
SHKBP1-204ENST00000594862 A0A0D9SFI3 127 aa21.08■□□□□ 0.97
SHKBP1-204ENST00000594862 FLOT1O75955 427 aa21.08■□□□□ 0.97
SHKBP1-204ENST00000594862 INHAP05111 366 aa21.08■□□□□ 0.97
SHKBP1-204ENST00000594862 GJB1P08034 283 aa21.08■□□□□ 0.97
SHKBP1-204ENST00000594862 TSPY3P0CV98 308 aa21.08■□□□□ 0.97
SHKBP1-204ENST00000594862 TSPY8P0CW00 308 aa21.08■□□□□ 0.97
SHKBP1-204ENST00000594862 CCL5P13501 91 aa21.08■□□□□ 0.97
SHKBP1-204ENST00000594862 RGS2P41220 211 aa21.08■□□□□ 0.97
SHKBP1-204ENST00000594862 CCDC129Q6ZRS4 1044 aa21.08■□□□□ 0.97
SHKBP1-204ENST00000594862 GPR142Q7Z601 462 aa21.08■□□□□ 0.97
SHKBP1-204ENST00000594862 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.08■□□□□ 0.97
SHKBP1-204ENST00000594862 RNF208Q9H0X6 261 aa21.08■□□□□ 0.97
SHKBP1-204ENST00000594862 ANAPC4Q9UJX5 808 aa21.08■□□□□ 0.97
SHKBP1-204ENST00000594862 IVNS1ABPQ9Y6Y0 642 aa21.08■□□□□ 0.97
SHKBP1-204ENST00000594862 PLXNB2O15031 1838 aa21.07■□□□□ 0.96
SHKBP1-204ENST00000594862 CNMDO75829 334 aa21.07■□□□□ 0.96
SHKBP1-204ENST00000594862 ELNP15502 786 aa21.07■□□□□ 0.96
SHKBP1-204ENST00000594862 DSG3P32926 999 aa21.07■□□□□ 0.96
SHKBP1-204ENST00000594862 NMIQ13287 307 aaPredicted RBP21.07■□□□□ 0.96
SHKBP1-204ENST00000594862 SPICE1Q8N0Z3 855 aa21.07■□□□□ 0.96
SHKBP1-204ENST00000594862 STK11IPQ8N1F8 1099 aa21.07■□□□□ 0.96
SHKBP1-204ENST00000594862 SHCBP1Q8NEM2 672 aa21.07■□□□□ 0.96
SHKBP1-204ENST00000594862 NEDD1Q8NHV4 660 aa21.07■□□□□ 0.96
SHKBP1-204ENST00000594862 FAM227BQ96M60 508 aa21.07■□□□□ 0.96
SHKBP1-204ENST00000594862 PORCNQ9H237 461 aa21.07■□□□□ 0.96
SHKBP1-204ENST00000594862 DIAPH3Q9NSV4 1193 aa21.07■□□□□ 0.96
SHKBP1-204ENST00000594862 DOCK3Q8IZD9 2030 aa21.07■□□□□ 0.96
SHKBP1-204ENST00000594862 PARP14Q460N5 1801 aa21.06■□□□□ 0.96
SHKBP1-204ENST00000594862 RLFQ13129 1914 aa21.06■□□□□ 0.96
SHKBP1-204ENST00000594862 IGKV6D-41A0A0C4DH26 115 aa21.06■□□□□ 0.96
SHKBP1-204ENST00000594862 FOXP2O15409 715 aa21.06■□□□□ 0.96
SHKBP1-204ENST00000594862 PRDM1O75626 825 aa21.06■□□□□ 0.96
SHKBP1-204ENST00000594862 TTLL1O95922 423 aa21.06■□□□□ 0.96
SHKBP1-204ENST00000594862 MYCP01106 439 aaPredicted RBP21.06■□□□□ 0.96
SHKBP1-204ENST00000594862 EN2P19622 333 aaPredicted RBP21.06■□□□□ 0.96
SHKBP1-204ENST00000594862 SDSP20132 328 aa21.06■□□□□ 0.96
SHKBP1-204ENST00000594862 MTFR1Q15390 333 aa21.06■□□□□ 0.96
SHKBP1-204ENST00000594862 Q3C1V9 767 aa21.06■□□□□ 0.96
SHKBP1-204ENST00000594862 APBA2Q99767 749 aa21.06■□□□□ 0.96
SHKBP1-204ENST00000594862 ZNF236Q9UL36 1845 aa21.06■□□□□ 0.96
SHKBP1-204ENST00000594862 MYH4Q9Y623 1939 aa21.06■□□□□ 0.96
SHKBP1-204ENST00000594862 SLC15A5A6NIM6 579 aa21.05■□□□□ 0.96
SHKBP1-204ENST00000594862 PCP11498 1178 aaKnown RBP21.05■□□□□ 0.96
SHKBP1-204ENST00000594862 GJA8P48165 433 aa21.05■□□□□ 0.96
SHKBP1-204ENST00000594862 NT5C2P49902 561 aa21.05■□□□□ 0.96
SHKBP1-204ENST00000594862 IRX6P78412 446 aaPredicted RBP21.05■□□□□ 0.96
SHKBP1-204ENST00000594862 MORN1Q5T089 497 aa21.05■□□□□ 0.96
SHKBP1-204ENST00000594862 WDR78Q5VTH9 848 aa21.05■□□□□ 0.96
SHKBP1-204ENST00000594862 POTEEQ6S8J3 1075 aa21.05■□□□□ 0.96
SHKBP1-204ENST00000594862 MKL1Q969V6 931 aa21.05■□□□□ 0.96
SHKBP1-204ENST00000594862 MTMR4Q9NYA4 1195 aa21.05■□□□□ 0.96
SHKBP1-204ENST00000594862 BTBD7Q9P203 1132 aa21.05■□□□□ 0.96
SHKBP1-204ENST00000594862 STRNO43815 780 aa21.04■□□□□ 0.96
SHKBP1-204ENST00000594862 RAD21O60216 631 aa21.04■□□□□ 0.96
SHKBP1-204ENST00000594862 ZKSCAN1P17029 563 aaPredicted RBP21.04■□□□□ 0.96
SHKBP1-204ENST00000594862 COPB2P35606 906 aa21.04■□□□□ 0.96
SHKBP1-204ENST00000594862 KIAA1755Q5JYT7 1200 aa21.04■□□□□ 0.96
SHKBP1-204ENST00000594862 VPS53Q5VIR6 699 aa21.04■□□□□ 0.96
SHKBP1-204ENST00000594862 CEP95Q96GE4 821 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms